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The map label for this gene is SrmR2 [H]

Identifier: 20808382

GI number: 20808382

Start: 1927294

End: 1928349

Strand: Reverse

Name: SrmR2 [H]

Synonym: TTE1978

Alternate gene names: 20808382

Gene position: 1928349-1927294 (Counterclockwise)

Preceding gene: 20808383

Following gene: 20808381

Centisome position: 71.7

GC content: 34.56

Gene sequence:

>1056_bases
ATGGTCGATTACAATCTGTTGAGAAAAATTGGTGAAGATATTAAGAAACATTTGGATGTTCCTCTTTGCATATTTGACAC
AGAAGGAAATTTAATATACGGAAAAGAAGATTTTTTTGAAAAAAAAGCAGGATTTTTAGACCTGATGGTAGAATATATTG
AAGAAAGAGATGTCTATTACATAGGAGAATTTACATGTTACAACATTTTCTATGATAATAATCCAGTTTTTGTAATCGCT
TTAAAGGGGAAGACCGAAGAGGAGAAAAAGCTTATACTTGCGATAAGCCTTATTTTCAGATATTTCGATGAGAATCTGTC
AAAAGAAGATTACCTTATAAACGTGCTTGAAAATAGATTGCCTTCCAGCCTGCTTTCCTACTATGCGCACAGGTATAAGA
TTGATAATACTGTAAGCTATAATGTGGCAATTGTAGAGGTTGAAAATGAAATAGAGGACGCTGTAAAAATTGTGCTAAAC
ATTTTTGAAAGAAAGGCTGTTCATGTCATAAAAATTGGTAAAAAACGATTTGCAGTTATATTTCCTTCTAGATATCGCGA
AAATTTAGTACAGCTTTTCAAGACGATGAAGGATATGATAGAATCCGAAGGATACTTGAAAAATGTTAAAATAGCCGGTT
CTTTTTCTTCTTTTCCTCTTGAGAAGCTCCATGTAGCCTATAAAGAGGCTGAAAAGGCTCTCTTCTTTGGCGAGAAACTG
GAAGGGGAAAGAGGGATATATCTGTATCAGGATTATATCTACTCAGAAATTCTATGGGGGATGGATAAGGAAAAAGCAGA
AGAGTTTTTAGAGAGAGTTAACATTGGGGAAGACCTTTTAAAAGACGAAGAACTCATGCAGACTTTAAATGCTTTTTTCA
GAAATAATTTGAATTTGAGTGAGACTTCAAGAGACCTTTACATACATAGGAATACTTTGGTTTACAGGCTGGACAAGATT
TTGAAGATGTCGGGCTTGGATGCCCGCAAGTTTGATGAGGCTTTACTTCTCAAATTGGCGATTACTTTGGCAAAATTATA
CGATATTTCGAGGTGA

Upstream 100 bases:

>100_bases
TTTGACAAAATGCCACATAAATTTACTTTTGCCTCTTATTTCTTCTAGAAAATAGTGTATAATTATTGTATACTAAGAAC
TAGGAAAATGGGTGAGGATG

Downstream 100 bases:

>100_bases
AAAGAGTTGATAAAGTTTATAAATGTTTCTAAAAAATATGACAAAGGGATAATTGCCCTTTCAAATATCAATTTTGAAAT
TGAAAGCGGCGAATTTGTCT

Product: regulator of polyketide synthase expression

Products: NA

Alternate protein names: Sugar diacid regulator [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MVDYNLLRKIGEDIKKHLDVPLCIFDTEGNLIYGKEDFFEKKAGFLDLMVEYIEERDVYYIGEFTCYNIFYDNNPVFVIA
LKGKTEEEKKLILAISLIFRYFDENLSKEDYLINVLENRLPSSLLSYYAHRYKIDNTVSYNVAIVEVENEIEDAVKIVLN
IFERKAVHVIKIGKKRFAVIFPSRYRENLVQLFKTMKDMIESEGYLKNVKIAGSFSSFPLEKLHVAYKEAEKALFFGEKL
EGERGIYLYQDYIYSEILWGMDKEKAEEFLERVNIGEDLLKDEELMQTLNAFFRNNLNLSETSRDLYIHRNTLVYRLDKI
LKMSGLDARKFDEALLLKLAITLAKLYDISR

Sequences:

>Translated_351_residues
MVDYNLLRKIGEDIKKHLDVPLCIFDTEGNLIYGKEDFFEKKAGFLDLMVEYIEERDVYYIGEFTCYNIFYDNNPVFVIA
LKGKTEEEKKLILAISLIFRYFDENLSKEDYLINVLENRLPSSLLSYYAHRYKIDNTVSYNVAIVEVENEIEDAVKIVLN
IFERKAVHVIKIGKKRFAVIFPSRYRENLVQLFKTMKDMIESEGYLKNVKIAGSFSSFPLEKLHVAYKEAEKALFFGEKL
EGERGIYLYQDYIYSEILWGMDKEKAEEFLERVNIGEDLLKDEELMQTLNAFFRNNLNLSETSRDLYIHRNTLVYRLDKI
LKMSGLDARKFDEALLLKLAITLAKLYDISR
>Mature_351_residues
MVDYNLLRKIGEDIKKHLDVPLCIFDTEGNLIYGKEDFFEKKAGFLDLMVEYIEERDVYYIGEFTCYNIFYDNNPVFVIA
LKGKTEEEKKLILAISLIFRYFDENLSKEDYLINVLENRLPSSLLSYYAHRYKIDNTVSYNVAIVEVENEIEDAVKIVLN
IFERKAVHVIKIGKKRFAVIFPSRYRENLVQLFKTMKDMIESEGYLKNVKIAGSFSSFPLEKLHVAYKEAEKALFFGEKL
EGERGIYLYQDYIYSEILWGMDKEKAEEFLERVNIGEDLLKDEELMQTLNAFFRNNLNLSETSRDLYIHRNTLVYRLDKI
LKMSGLDARKFDEALLLKLAITLAKLYDISR

Specific function: Seems to regulate the expression of the operons for the enzymes involved in D-galactarate, D-glucarate and D-glycerate utilization [H]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=386, Percent_Identity=23.5751295336788, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 41341; Mature: 41341

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDYNLLRKIGEDIKKHLDVPLCIFDTEGNLIYGKEDFFEKKAGFLDLMVEYIEERDVYY
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHCCHHHHHHHHHHCCCEEE
IGEFTCYNIFYDNNPVFVIALKGKTEEEKKLILAISLIFRYFDENLSKEDYLINVLENRL
EEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PSSLLSYYAHRYKIDNTVSYNVAIVEVENEIEDAVKIVLNIFERKAVHVIKIGKKRFAVI
HHHHHHHHHHHEECCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEE
FPSRYRENLVQLFKTMKDMIESEGYLKNVKIAGSFSSFPLEKLHVAYKEAEKALFFGEKL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
EGERGIYLYQDYIYSEILWGMDKEKAEEFLERVNIGEDLLKDEELMQTLNAFFRNNLNLS
CCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
ETSRDLYIHRNTLVYRLDKILKMSGLDARKFDEALLLKLAITLAKLYDISR
CCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDYNLLRKIGEDIKKHLDVPLCIFDTEGNLIYGKEDFFEKKAGFLDLMVEYIEERDVYY
CCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHCCHHHHHHHHHHCCCEEE
IGEFTCYNIFYDNNPVFVIALKGKTEEEKKLILAISLIFRYFDENLSKEDYLINVLENRL
EEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
PSSLLSYYAHRYKIDNTVSYNVAIVEVENEIEDAVKIVLNIFERKAVHVIKIGKKRFAVI
HHHHHHHHHHHEECCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEE
FPSRYRENLVQLFKTMKDMIESEGYLKNVKIAGSFSSFPLEKLHVAYKEAEKALFFGEKL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
EGERGIYLYQDYIYSEILWGMDKEKAEEFLERVNIGEDLLKDEELMQTLNAFFRNNLNLS
CCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
ETSRDLYIHRNTLVYRLDKILKMSGLDARKFDEALLLKLAITLAKLYDISR
CCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503; 10762278 [H]