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The map label for this gene is NlpD4 [C]

Identifier: 20808379

GI number: 20808379

Start: 1924562

End: 1925731

Strand: Reverse

Name: NlpD4 [C]

Synonym: TTE1975

Alternate gene names: 20808379

Gene position: 1925731-1924562 (Counterclockwise)

Preceding gene: 20808380

Following gene: 20808378

Centisome position: 71.6

GC content: 42.91

Gene sequence:

>1170_bases
ATGTCTAAAATTTACAAGGGGGAAGTGACATTGCAAAAGTACAAGTTAAAATGGCTTATATTTGCTCTTGTCTTCTTAGT
GACGGCTCTTTTTGCATCTTACCCGAGGGCTGACCAGTTACAGGATGCTAAAAATAAGCTAAACCAGATACAGAAAACTT
TGGTGGAAACTCAAAAGAGAAAGCAAGAAATAATTAATCAGAAAAATGACATTGCTGCGCAGCTTAAGGAGCTGGATAAA
AAACTCAACCTGACTTCCCAGCAACTGGCAGAAGCTCAAAAGAGGCTTCGGGAGGTCACAGCAAAGCTTGAAAAGACCAG
GAAGGACTTAGAAGAGGCTAAAAAGAAGGAAAAAGAGCAGTACGACACCATGAAAGAGCGGATAAAAGCCATGTACATAA
GCGGCGAATGGGGCTATTTAGATGTGCTTTTGAATGCCACAAGCTTTGCGGATTTTATAAGCAGATTAGATATTGTAAAG
TGTATAATAGACTTTGATGCGAATTTATTTGATACGTACAAGAAACAGAGGGAGATAATTGCGGAGAAGGAAAAGCAGCT
GGCTCAAATGCAGAAAGAAGCTCAGGATTACAAGAACCAGATAGCTGCAAGGCAGAGAGAACTTCAGGTGGCGATGGCAT
CTAGAGAGGGCTTAATGCGGGACCTTGAGAGGCAGCAAAAGTATTATGAAGAGCAGGAAGACCAATTGTTAAGGGAGTCA
AAACAATTGGAAAAGGTCATACAGGAGCTTCAAAGGAAGTCAAAGCTCAAATACAGTGGTGGAAAACTTCTCTGGCCTGT
TCCTTCAAGTGGTGTTATTACTTCTCCCTTTGGCATGCGCCTGCATCCCATTCTTGGAACCTCCAGGATGCATACGGGGA
TTGACATAGCGGCAGAAATGGGAGCAGATATTGTTGCGGCTGCAAACGGACAAGTTATATTTTCAGGTTACTACGGGGGT
TACGGATACGCAGTTATAATTGACCACGGAGACGGCATCTCTACCCTTTATGCGCACTGTTCTGCCCTTTTAGTTAAAGA
AGGTGATACGGTAAAAAGGGGACAAGTTATAGCGAAAATAGGGAGTACAGGCCTTTCTACAGGACCCCACCTCCACTTTG
AAGTGAGAAAAAATGGTGTTCCAGTGAATCCAATGGACTGGCTTAAATAG

Upstream 100 bases:

>100_bases
CCTTTGTCCGATGTCATCAAGGACATGGCTTTGTATTTTGCGCTTTTAGGGTCTTTGATTGGCGCTATTGGCAGCGGCCT
TTCTATAAAGAGGTTCTTAA

Downstream 100 bases:

>100_bases
CCTGTCTGTTTTTTTTATTAGCAGAATGTTGTATAATAAAGAGGAGACTAAAAAAGGTGGGGGAAAGATGTCAAAGAAAA
GATTTTATGTCTTGCTGGCA

Product: membrane proteins related to metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSKIYKGEVTLQKYKLKWLIFALVFLVTALFASYPRADQLQDAKNKLNQIQKTLVETQKRKQEIINQKNDIAAQLKELDK
KLNLTSQQLAEAQKRLREVTAKLEKTRKDLEEAKKKEKEQYDTMKERIKAMYISGEWGYLDVLLNATSFADFISRLDIVK
CIIDFDANLFDTYKKQREIIAEKEKQLAQMQKEAQDYKNQIAARQRELQVAMASREGLMRDLERQQKYYEEQEDQLLRES
KQLEKVIQELQRKSKLKYSGGKLLWPVPSSGVITSPFGMRLHPILGTSRMHTGIDIAAEMGADIVAAANGQVIFSGYYGG
YGYAVIIDHGDGISTLYAHCSALLVKEGDTVKRGQVIAKIGSTGLSTGPHLHFEVRKNGVPVNPMDWLK

Sequences:

>Translated_389_residues
MSKIYKGEVTLQKYKLKWLIFALVFLVTALFASYPRADQLQDAKNKLNQIQKTLVETQKRKQEIINQKNDIAAQLKELDK
KLNLTSQQLAEAQKRLREVTAKLEKTRKDLEEAKKKEKEQYDTMKERIKAMYISGEWGYLDVLLNATSFADFISRLDIVK
CIIDFDANLFDTYKKQREIIAEKEKQLAQMQKEAQDYKNQIAARQRELQVAMASREGLMRDLERQQKYYEEQEDQLLRES
KQLEKVIQELQRKSKLKYSGGKLLWPVPSSGVITSPFGMRLHPILGTSRMHTGIDIAAEMGADIVAAANGQVIFSGYYGG
YGYAVIIDHGDGISTLYAHCSALLVKEGDTVKRGQVIAKIGSTGLSTGPHLHFEVRKNGVPVNPMDWLK
>Mature_388_residues
SKIYKGEVTLQKYKLKWLIFALVFLVTALFASYPRADQLQDAKNKLNQIQKTLVETQKRKQEIINQKNDIAAQLKELDKK
LNLTSQQLAEAQKRLREVTAKLEKTRKDLEEAKKKEKEQYDTMKERIKAMYISGEWGYLDVLLNATSFADFISRLDIVKC
IIDFDANLFDTYKKQREIIAEKEKQLAQMQKEAQDYKNQIAARQRELQVAMASREGLMRDLERQQKYYEEQEDQLLRESK
QLEKVIQELQRKSKLKYSGGKLLWPVPSSGVITSPFGMRLHPILGTSRMHTGIDIAAEMGADIVAAANGQVIFSGYYGGY
GYAVIIDHGDGISTLYAHCSALLVKEGDTVKRGQVIAKIGSTGLSTGPHLHFEVRKNGVPVNPMDWLK

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=418, Percent_Identity=22.488038277512, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI87081989, Length=126, Percent_Identity=41.2698412698413, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789099, Length=126, Percent_Identity=40.4761904761905, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI87082174, Length=129, Percent_Identity=34.1085271317829, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 44398; Mature: 44267

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCEEEEEEECCCCCCCCHHHCC
>Mature Secondary Structure 
SKIYKGEVTLQKYKLKWLIFALVFLVTALFASYPRADQLQDAKNKLNQIQKTLVETQKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KQEIINQKNDIAAQLKELDKKLNLTSQQLAEAQKRLREVTAKLEKTRKDLEEAKKKEKEQ
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YDTMKERIKAMYISGEWGYLDVLLNATSFADFISRLDIVKCIIDFDANLFDTYKKQREII
HHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AEKEKQLAQMQKEAQDYKNQIAARQRELQVAMASREGLMRDLERQQKYYEEQEDQLLRES
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQLEKVIQELQRKSKLKYSGGKLLWPVPSSGVITSPFGMRLHPILGTSRMHTGIDIAAEM
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEECCCCCEEEHHCCCCHHHCCCHHHHHC
GADIVAAANGQVIFSGYYGGYGYAVIIDHGDGISTLYAHCSALLVKEGDTVKRGQVIAKI
CCCEEEECCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
GSTGLSTGPHLHFEVRKNGVPVNPMDWLK
CCCCCCCCCEEEEEEECCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]