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The map label for this gene is 20808362

Identifier: 20808362

GI number: 20808362

Start: 1903384

End: 1903785

Strand: Reverse

Name: 20808362

Synonym: TTE1958

Alternate gene names: NA

Gene position: 1903785-1903384 (Counterclockwise)

Preceding gene: 20808363

Following gene: 20808361

Centisome position: 70.79

GC content: 29.6

Gene sequence:

>402_bases
GTGTCAAAATTGGAAAAAGATGAATTGGTAAAATTTTGGCTTGAAACAGCTGAGAAAGATTACAATACTATGCTTCATTT
ATATGAAAGTAAAGATTATCATTGGAGCCTTTTTATGGGGCATTTAGTAATTGAAAAATTGCTAAAAGCATTGTATGTTA
AAAATATAGGTCCCGATGTACCAAGGACACATGATTTATTGAGAATAGCTGAAAAAATTGGGATTTCTTTAACTGAACAA
ACGAGAGATTATTTTGATTTACTTACTACCTTTAACATAACTGCTAGATATCCTGATTATAAGCAAACTTTTTATAAAAA
ATGTACTCCTGAATTTACAGCGTCAATTATTAATGTCGTAAAGGAGTTGAGAGAATGGATACTGATGTTGATAGAAAAAT
GA

Upstream 100 bases:

>100_bases
ACAAGAAGTTCTTATTCTCATATGAAAGCTTCATCTCAAATAAATGGGATGAGGCTTTTATTATTGTGGTATAATCAATT
ATAGAGAATATCAAAGAGGT

Downstream 100 bases:

>100_bases
TACAAAAATTAGTAAAAGAATACATTGACTTAGTGAAAAAAGAAATAAATGTCAAAAATGCTTATTTATTTGGTTCTTAT
GCAAGAGGGAAATATGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: HEPN Domain-Containing Protein

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MSKLEKDELVKFWLETAEKDYNTMLHLYESKDYHWSLFMGHLVIEKLLKALYVKNIGPDVPRTHDLLRIAEKIGISLTEQ
TRDYFDLLTTFNITARYPDYKQTFYKKCTPEFTASIINVVKELREWILMLIEK

Sequences:

>Translated_133_residues
MSKLEKDELVKFWLETAEKDYNTMLHLYESKDYHWSLFMGHLVIEKLLKALYVKNIGPDVPRTHDLLRIAEKIGISLTEQ
TRDYFDLLTTFNITARYPDYKQTFYKKCTPEFTASIINVVKELREWILMLIEK
>Mature_132_residues
SKLEKDELVKFWLETAEKDYNTMLHLYESKDYHWSLFMGHLVIEKLLKALYVKNIGPDVPRTHDLLRIAEKIGISLTEQT
RDYFDLLTTFNITARYPDYKQTFYKKCTPEFTASIINVVKELREWILMLIEK

Specific function: Unknown

COG id: COG2250

COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15926; Mature: 15795

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50910 HEPN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLEKDELVKFWLETAEKDYNTMLHLYESKDYHWSLFMGHLVIEKLLKALYVKNIGPDV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRTHDLLRIAEKIGISLTEQTRDYFDLLTTFNITARYPDYKQTFYKKCTPEFTASIINVV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
KELREWILMLIEK
HHHHHHHHHHHCC
>Mature Secondary Structure 
SKLEKDELVKFWLETAEKDYNTMLHLYESKDYHWSLFMGHLVIEKLLKALYVKNIGPDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRTHDLLRIAEKIGISLTEQTRDYFDLLTTFNITARYPDYKQTFYKKCTPEFTASIINVV
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
KELREWILMLIEK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA