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The map label for this gene is 20808360

Identifier: 20808360

GI number: 20808360

Start: 1901615

End: 1902991

Strand: Reverse

Name: 20808360

Synonym: TTE1956

Alternate gene names: NA

Gene position: 1902991-1901615 (Counterclockwise)

Preceding gene: 20808361

Following gene: 20808359

Centisome position: 70.76

GC content: 39.94

Gene sequence:

>1377_bases
GTGGGTTGTTACCTGATGCCTCATCCTCCTATAATTGTGCACGAGGTAGGGCGCGGAGAAGAAAGAAAAATACAAAAGAC
AATTGACTCTCTTGAAAATATTTCCCAAGAAATAAAACAAAAGCGGCCGGACACGGTGATAGTGATAACACCCCATGGCT
ATGTATTTAAAGATGCTGTTTCAATAACTACATTACCTTCTCTAGAAGGAGATTTATCTCAATTTGGCGCAAGAGAAGTA
AAATTTAAATTTGAAAATGATTTAGACCTGGCAAGAGAAATAATGGAAGAGACGAAGAAAAGGAACATACCAATAGCAGA
AGTAAGTGAGGAACTGATAAAAAAATACGTACTTCCCAAAAAACTTGACCACGGGACAATTGTACCTTTATACTTTGTTA
CCAAACATTACCCTGATTTCAAATTAATCCACATGTCTTATGGCTTTTTGCCTTTTGAAAAGCTTTATGAGTTTGGCGTT
GCAATCAAAGATGCAATAAATAAATCGGATAGAAGGGTAGTCTTCATAGCAAGTGGTGACTTATCCCATAAACTGACGCC
AAACAGCCCAAATGGTTACACTCCAAAAGGAGAAGTTTTTGACAAGACCCTTTTACAATTGCTTTCAGAGATGAAAGTAG
AAGAAGTAATAAGAATGGATAAGGATTTGATAGAAGAAGCTGCCGAATGTGGTTTTAGATCTGTCTGCGTAATGCTGGGA
GTCTTGGATGGATATGAAGTCAATGCTAAAGTTCTTTCCCACGAAGGTCCTTTTGGAGTCGGGTATGGTGTTGCAAAATT
TGATGTAACAGGCTATAAAAGCACAAGTTTACTTGAAAGATTTTCTACAATAGAAGAAGACCCTTATGTGAAACTTGCTA
AGGAAAGCCTTGAATACTATGTGAAATACAGGCGTCCCATGCCTGTCCCCGAAGGGCTTCCTGAGGAAATGTACAGAAGA
AAAGCGGGAGTTTTTGTGACCCTTCACAAAAAGGGAGAGCTTAGAGGCTGTATAGGAACAGTAGTTCCGCAGAAGAAAAA
CGTAGCTGAAGAGATAATAAGAAACGCTATAAGTGCAGGTTTTGAAGACCCCCGTTTTCCCCCGGTTAGAGAGGAAGAGC
TTCCCGAAATCGAATATTCTGTCGATGTATTAATGCCTACGCAGCCTGTGAAATCAAAAGATGAGCTTGACCCCAAAAGA
TATGGAGTTATTGTGAGAAAAGGATTTAGGGCAGGACTTTTACTGCCTGATATAGAGGGAGTGGACACTGTGGAGGAGCA
GCTTTCCATTGCTTTGAGAAAAGCTGGGATTAGGCCCGATGAAGACTACACAATTGAGAAGTTTGAAGTTGAAAGGCACG
AACAAAGGGTGTTTTAA

Upstream 100 bases:

>100_bases
GCTATAAAGCTTCATCTCAAATAAATGGGATGAGGCTTTTATTATTGTGGTATAATCAATTATAGAGAATATCAAAGAGG
TGTTAAATATGGGAGAACTG

Downstream 100 bases:

>100_bases
ATGCTAAAAGAAGCCATGTTTTATGAAAAATTAGAAAATAATGCCATTAGGTGCCGGCTATGCCCTCACAACTGCTATAT
CACTGAAGGGCGATACGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 457

Protein sequence:

>458_residues
MGCYLMPHPPIIVHEVGRGEERKIQKTIDSLENISQEIKQKRPDTVIVITPHGYVFKDAVSITTLPSLEGDLSQFGAREV
KFKFENDLDLAREIMEETKKRNIPIAEVSEELIKKYVLPKKLDHGTIVPLYFVTKHYPDFKLIHMSYGFLPFEKLYEFGV
AIKDAINKSDRRVVFIASGDLSHKLTPNSPNGYTPKGEVFDKTLLQLLSEMKVEEVIRMDKDLIEEAAECGFRSVCVMLG
VLDGYEVNAKVLSHEGPFGVGYGVAKFDVTGYKSTSLLERFSTIEEDPYVKLAKESLEYYVKYRRPMPVPEGLPEEMYRR
KAGVFVTLHKKGELRGCIGTVVPQKKNVAEEIIRNAISAGFEDPRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKR
YGVIVRKGFRAGLLLPDIEGVDTVEEQLSIALRKAGIRPDEDYTIEKFEVERHEQRVF

Sequences:

>Translated_458_residues
MGCYLMPHPPIIVHEVGRGEERKIQKTIDSLENISQEIKQKRPDTVIVITPHGYVFKDAVSITTLPSLEGDLSQFGAREV
KFKFENDLDLAREIMEETKKRNIPIAEVSEELIKKYVLPKKLDHGTIVPLYFVTKHYPDFKLIHMSYGFLPFEKLYEFGV
AIKDAINKSDRRVVFIASGDLSHKLTPNSPNGYTPKGEVFDKTLLQLLSEMKVEEVIRMDKDLIEEAAECGFRSVCVMLG
VLDGYEVNAKVLSHEGPFGVGYGVAKFDVTGYKSTSLLERFSTIEEDPYVKLAKESLEYYVKYRRPMPVPEGLPEEMYRR
KAGVFVTLHKKGELRGCIGTVVPQKKNVAEEIIRNAISAGFEDPRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKR
YGVIVRKGFRAGLLLPDIEGVDTVEEQLSIALRKAGIRPDEDYTIEKFEVERHEQRVF
>Mature_457_residues
GCYLMPHPPIIVHEVGRGEERKIQKTIDSLENISQEIKQKRPDTVIVITPHGYVFKDAVSITTLPSLEGDLSQFGAREVK
FKFENDLDLAREIMEETKKRNIPIAEVSEELIKKYVLPKKLDHGTIVPLYFVTKHYPDFKLIHMSYGFLPFEKLYEFGVA
IKDAINKSDRRVVFIASGDLSHKLTPNSPNGYTPKGEVFDKTLLQLLSEMKVEEVIRMDKDLIEEAAECGFRSVCVMLGV
LDGYEVNAKVLSHEGPFGVGYGVAKFDVTGYKSTSLLERFSTIEEDPYVKLAKESLEYYVKYRRPMPVPEGLPEEMYRRK
AGVFVTLHKKGELRGCIGTVVPQKKNVAEEIIRNAISAGFEDPRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKRY
GVIVRKGFRAGLLLPDIEGVDTVEEQLSIALRKAGIRPDEDYTIEKFEVERHEQRVF

Specific function: Unknown

COG id: COG3885

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1956_THETN (Q8R8N9)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623531.1
- ProteinModelPortal:   Q8R8N9
- SMR:   Q8R8N9
- GeneID:   997151
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1956
- NMPDR:   fig|273068.3.peg.1818
- HOGENOM:   HBG449089
- OMA:   AECGFRS
- ProtClustDB:   PRK03881
- BioCyc:   TTEN273068:TTE1956-MONOMER
- HAMAP:   MF_00645
- InterPro:   IPR002733
- InterPro:   IPR004183
- TIGRFAMs:   TIGR00296

Pfam domain/function: PF01871 AMMECR1; PF02900 LigB; SSF53213 Xdiol_dOase_3B

EC number: NA

Molecular weight: Translated: 52189; Mature: 52058

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCYLMPHPPIIVHEVGRGEERKIQKTIDSLENISQEIKQKRPDTVIVITPHGYVFKDAV
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCE
SITTLPSLEGDLSQFGAREVKFKFENDLDLAREIMEETKKRNIPIAEVSEELIKKYVLPK
EEEECCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
KLDHGTIVPLYFVTKHYPDFKLIHMSYGFLPFEKLYEFGVAIKDAINKSDRRVVFIASGD
CCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC
LSHKLTPNSPNGYTPKGEVFDKTLLQLLSEMKVEEVIRMDKDLIEEAAECGFRSVCVMLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VLDGYEVNAKVLSHEGPFGVGYGVAKFDVTGYKSTSLLERFSTIEEDPYVKLAKESLEYY
HCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKYRRPMPVPEGLPEEMYRRKAGVFVTLHKKGELRGCIGTVVPQKKNVAEEIIRNAISAG
HHHCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
FEDPRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKRYGVIVRKGFRAGLLLPDIEG
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCC
VDTVEEQLSIALRKAGIRPDEDYTIEKFEVERHEQRVF
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GCYLMPHPPIIVHEVGRGEERKIQKTIDSLENISQEIKQKRPDTVIVITPHGYVFKDAV
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECCE
SITTLPSLEGDLSQFGAREVKFKFENDLDLAREIMEETKKRNIPIAEVSEELIKKYVLPK
EEEECCCCCCCHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
KLDHGTIVPLYFVTKHYPDFKLIHMSYGFLPFEKLYEFGVAIKDAINKSDRRVVFIASGD
CCCCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCC
LSHKLTPNSPNGYTPKGEVFDKTLLQLLSEMKVEEVIRMDKDLIEEAAECGFRSVCVMLG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VLDGYEVNAKVLSHEGPFGVGYGVAKFDVTGYKSTSLLERFSTIEEDPYVKLAKESLEYY
HCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VKYRRPMPVPEGLPEEMYRRKAGVFVTLHKKGELRGCIGTVVPQKKNVAEEIIRNAISAG
HHHCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCC
FEDPRFPPVREEELPEIEYSVDVLMPTQPVKSKDELDPKRYGVIVRKGFRAGLLLPDIEG
CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCCC
VDTVEEQLSIALRKAGIRPDEDYTIEKFEVERHEQRVF
CHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336