| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20808329
Identifier: 20808329
GI number: 20808329
Start: 1862900
End: 1863805
Strand: Reverse
Name: 20808329
Synonym: TTE1925
Alternate gene names: NA
Gene position: 1863805-1862900 (Counterclockwise)
Preceding gene: 20808330
Following gene: 20808327
Centisome position: 69.3
GC content: 37.75
Gene sequence:
>906_bases ATGTCAGTAAAAATTGAAAAAATAAACTTTTCTGGATGGGAGAACAGCATAAGACTTTCAAATGGCATTATTGATGTTGT GGCGACTACAGATATAGGGCCCAGAATCGTGAGATTTGGATTTGAGGAAGATGCAAACGAGTTTAATCTGGATCCCAAAA CTCTCGGATTAAAAGGAGGGGATGAATTCAGGTTTTACGGCGGCCACAGGCTATGGCACAGTCCTGAAGACAGAAAGAGG ACTTATATACCAGATAATGACCCTGTTGATTGGCATGAAATAGAAAACGGGATAAGGCTTATTCAGAAGCCTGAAAAATG GGTAAACACACAGAAGGAAATTGACATAGTTTTAAATCCGAATGAGAACAAAGTAAGGCTTGTACACAGGATAACTAATC TTGGAGCATGGCCTATTGAGCTTTCAGCATGGACAATAACAGTACTTGCACCTGAGGGCATCGAAATAATTCCTCAACCA AATAAAGACACAGATTTACTTCCAAATAGGCAAATTGTACTTTGGCCTTATTCTAAAATGAATGATAAAAGGGTGTATTG GGGAGAAAAATATATTGCACTGAAACAAGATCCTAATAACAGAAAACCTTTTAAGTTAGGAATTAATAACCAAGAAGGTT GGGCTGCTTACGTAAGAGGGGGACACCTTTTCATAAAAAGATATTATCCGAAGGAGAATGCAACATATCCTGACTTTGGT GTGTCTTTTGAAACATACACAAACGACTGGATGCTTGAAATAGAGACATTAAGTCCTTTAACAAAACTACAGCCCGGTGA AACAGTTGAACACATTGAAGAATGGGAGCTTTACGATGGAGTATATGTAAAGGAAATAGATGAGAACATATTTGATGATA TTGCGAAGAAGTATTGCAGAAGATAG
Upstream 100 bases:
>100_bases GCTTTTTCTGAGCTTGGGCCCAACGCTACGCTAATAGGAGCTGCTAATCTTGTGATGGACGAAGTACTATGAAAGCACTG TAACAGGAAGGAGGAGGAAT
Downstream 100 bases:
>100_bases GAATGTGTAAAACAAAATATTACAAAATAAACAAATAAGAAGAGGGAACAGCTCTTGTAGAATCTGTTCCCTCTTTTTCA ATCAATGGGCAGAGTGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSVKIEKINFSGWENSIRLSNGIIDVVATTDIGPRIVRFGFEEDANEFNLDPKTLGLKGGDEFRFYGGHRLWHSPEDRKR TYIPDNDPVDWHEIENGIRLIQKPEKWVNTQKEIDIVLNPNENKVRLVHRITNLGAWPIELSAWTITVLAPEGIEIIPQP NKDTDLLPNRQIVLWPYSKMNDKRVYWGEKYIALKQDPNNRKPFKLGINNQEGWAAYVRGGHLFIKRYYPKENATYPDFG VSFETYTNDWMLEIETLSPLTKLQPGETVEHIEEWELYDGVYVKEIDENIFDDIAKKYCRR
Sequences:
>Translated_301_residues MSVKIEKINFSGWENSIRLSNGIIDVVATTDIGPRIVRFGFEEDANEFNLDPKTLGLKGGDEFRFYGGHRLWHSPEDRKR TYIPDNDPVDWHEIENGIRLIQKPEKWVNTQKEIDIVLNPNENKVRLVHRITNLGAWPIELSAWTITVLAPEGIEIIPQP NKDTDLLPNRQIVLWPYSKMNDKRVYWGEKYIALKQDPNNRKPFKLGINNQEGWAAYVRGGHLFIKRYYPKENATYPDFG VSFETYTNDWMLEIETLSPLTKLQPGETVEHIEEWELYDGVYVKEIDENIFDDIAKKYCRR >Mature_300_residues SVKIEKINFSGWENSIRLSNGIIDVVATTDIGPRIVRFGFEEDANEFNLDPKTLGLKGGDEFRFYGGHRLWHSPEDRKRT YIPDNDPVDWHEIENGIRLIQKPEKWVNTQKEIDIVLNPNENKVRLVHRITNLGAWPIELSAWTITVLAPEGIEIIPQPN KDTDLLPNRQIVLWPYSKMNDKRVYWGEKYIALKQDPNNRKPFKLGINNQEGWAAYVRGGHLFIKRYYPKENATYPDFGV SFETYTNDWMLEIETLSPLTKLQPGETVEHIEEWELYDGVYVKEIDENIFDDIAKKYCRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35266; Mature: 35135
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKIEKINFSGWENSIRLSNGIIDVVATTDIGPRIVRFGFEEDANEFNLDPKTLGLKGG CCEEEEEEECCCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHEEECCCC DEFRFYGGHRLWHSPEDRKRTYIPDNDPVDWHEIENGIRLIQKPEKWVNTQKEIDIVLNP CCEEEECCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCHHHCCCCEEEEEEECC NENKVRLVHRITNLGAWPIELSAWTITVLAPEGIEIIPQPNKDTDLLPNRQIVLWPYSKM CCCEEEEEEEHHHCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCC NDKRVYWGEKYIALKQDPNNRKPFKLGINNQEGWAAYVRGGHLFIKRYYPKENATYPDFG CCCEEEECCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCEEEEEEEECCCCCCCCCCC VSFETYTNDWMLEIETLSPLTKLQPGETVEHIEEWELYDGVYVKEIDENIFDDIAKKYCR CEEEEECCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHC R C >Mature Secondary Structure SVKIEKINFSGWENSIRLSNGIIDVVATTDIGPRIVRFGFEEDANEFNLDPKTLGLKGG CEEEEEEECCCCCCEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCCHHEEECCCC DEFRFYGGHRLWHSPEDRKRTYIPDNDPVDWHEIENGIRLIQKPEKWVNTQKEIDIVLNP CCEEEECCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCHHHCCCCEEEEEEECC NENKVRLVHRITNLGAWPIELSAWTITVLAPEGIEIIPQPNKDTDLLPNRQIVLWPYSKM CCCEEEEEEEHHHCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCEEEEECCCCC NDKRVYWGEKYIALKQDPNNRKPFKLGINNQEGWAAYVRGGHLFIKRYYPKENATYPDFG CCCEEEECCEEEEEECCCCCCCCEEEECCCCCCEEEEEECCEEEEEEEECCCCCCCCCCC VSFETYTNDWMLEIETLSPLTKLQPGETVEHIEEWELYDGVYVKEIDENIFDDIAKKYCR CEEEEECCCEEEEEECCCCHHHCCCCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA