| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is DppD5 [H]
Identifier: 20808317
GI number: 20808317
Start: 1848625
End: 1849626
Strand: Reverse
Name: DppD5 [H]
Synonym: TTE1912
Alternate gene names: 20808317
Gene position: 1849626-1848625 (Counterclockwise)
Preceding gene: 20808318
Following gene: 20808316
Centisome position: 68.77
GC content: 40.32
Gene sequence:
>1002_bases ATGCTTGAGATTAGGAACTTGAAAGTGGTTTTTGAGACAGACAGGGGAGTAGTAAAAGCGGTAAATGGGATTGACCTAAC ACTTGAAAGAGGAAAAATTTTAGGCCTGGTAGGAGAATCGGGCTCAGGAAAAAGCATGACTTTGCTTTCTATTTTAAGGC TTGTCCCTTACCCGGGCAAAATTGTAGAAGGGGAAATTCTCTTTGAAGGAGAGGACCTTCTCAAAAAATCGGCTTCTCAG ATGAGGGAAATAAGGGGAAAGGACATAGCCATGATATTTCAAGACCCAATGACCACATTAAATCCGGTGTTTCCTGTAGG AGAGCAGATAAGGGAATCCTTGAGGGTTCACAATATAATAAAGCCTGAAAAAGAAGGTATATTAGGTTTTCTCAGGGAAA GGGACAGAAGAAAAAAAGAGTATGAAAAGGCAGTAGAACTTATGGAAAAAGTCGGGATATCATATCCTGAAAAGAGGTAT TTCTCATATCCCCATCAGTTCAGTGGGGGTATGCAGCAAAGAGCTATAATTGCTATTGCTCTTTCATGCAATCCTAAACT ACTTCTGGCTGACGAGCCTACAACTGCACTTGATGTGACAATTCAGGCGCAAATTTTGGATTTATTGAGGCAAATAAATG AAGTAAACGGCACCTCCATAATTTTTGTAACTCATGATTTGGCAGTGGCGGCAGAGTTTTGCGATGAAATAGCTGTCATG TACGCTGGGCAAATAGTGGAAAAAGGAGCTGTAGACAAGGTCATCGGAGAACCAAAGCATCCTTATACAAAAGGACTTTT GAAGTCTATACCTAAAATAACACGAAAAAAAGAAAAACTTTACGCCATACCGGGAAATGTCCCAGATTTGGCTTCTCTTT CACCTAAAGGCTGTCCTTTTTATGAGCGGTGTGAAGAAGCAGTGGAAGAATGCAAAGAAGTTGAACTTCCTTTAATTGAG GTTTCAGATGGAGAATTTGTGAGGTGTATAAAGTACCTCTAA
Upstream 100 bases:
>100_bases AGGCATAGCTTTAGTGATACTTGTACTCAGTATTAACCTTTTTGGAGAAGGATTGAGAGATATATTAGACCCAAGGCTTA AAGTGGAAGGAAGTGAATAA
Downstream 100 bases:
>100_bases AAGATGGGGTGTTAGATATGGAAAATGGCACTTTTATTCAAATAAAAAATCTCAAGAAATATTTCATAGAAGAGCCAGAC TTGTTAATGAAGCTTGTAGC
Product: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Products: ADP; phosphate; dipeptides [Cytoplasm] [C]
Alternate protein names: Stage 0 sporulation protein KD [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MLEIRNLKVVFETDRGVVKAVNGIDLTLERGKILGLVGESGSGKSMTLLSILRLVPYPGKIVEGEILFEGEDLLKKSASQ MREIRGKDIAMIFQDPMTTLNPVFPVGEQIRESLRVHNIIKPEKEGILGFLRERDRRKKEYEKAVELMEKVGISYPEKRY FSYPHQFSGGMQQRAIIAIALSCNPKLLLADEPTTALDVTIQAQILDLLRQINEVNGTSIIFVTHDLAVAAEFCDEIAVM YAGQIVEKGAVDKVIGEPKHPYTKGLLKSIPKITRKKEKLYAIPGNVPDLASLSPKGCPFYERCEEAVEECKEVELPLIE VSDGEFVRCIKYL
Sequences:
>Translated_333_residues MLEIRNLKVVFETDRGVVKAVNGIDLTLERGKILGLVGESGSGKSMTLLSILRLVPYPGKIVEGEILFEGEDLLKKSASQ MREIRGKDIAMIFQDPMTTLNPVFPVGEQIRESLRVHNIIKPEKEGILGFLRERDRRKKEYEKAVELMEKVGISYPEKRY FSYPHQFSGGMQQRAIIAIALSCNPKLLLADEPTTALDVTIQAQILDLLRQINEVNGTSIIFVTHDLAVAAEFCDEIAVM YAGQIVEKGAVDKVIGEPKHPYTKGLLKSIPKITRKKEKLYAIPGNVPDLASLSPKGCPFYERCEEAVEECKEVELPLIE VSDGEFVRCIKYL >Mature_333_residues MLEIRNLKVVFETDRGVVKAVNGIDLTLERGKILGLVGESGSGKSMTLLSILRLVPYPGKIVEGEILFEGEDLLKKSASQ MREIRGKDIAMIFQDPMTTLNPVFPVGEQIRESLRVHNIIKPEKEGILGFLRERDRRKKEYEKAVELMEKVGISYPEKRY FSYPHQFSGGMQQRAIIAIALSCNPKLLLADEPTTALDVTIQAQILDLLRQINEVNGTSIIFVTHDLAVAAEFCDEIAVM YAGQIVEKGAVDKVIGEPKHPYTKGLLKSIPKITRKKEKLYAIPGNVPDLASLSPKGCPFYERCEEAVEECKEVELPLIE VSDGEFVRCIKYL
Specific function: Part of the binding protein-dependent transport system for oligopeptides. Probably responsible for energy coupling to the transport system. Required for sporulation and competence [H]
COG id: COG0444
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI42741659, Length=262, Percent_Identity=32.4427480916031, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI9961252, Length=240, Percent_Identity=32.9166666666667, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI4505771, Length=240, Percent_Identity=32.9166666666667, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI9961250, Length=240, Percent_Identity=32.9166666666667, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI255708477, Length=325, Percent_Identity=27.0769230769231, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI21536376, Length=255, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI46592971, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI46592956, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI46592964, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI46592898, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592978, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI215820660, Length=238, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI20143975, Length=238, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI46592915, Length=259, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI21536378, Length=247, Percent_Identity=26.7206477732794, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1789963, Length=329, Percent_Identity=41.6413373860182, Blast_Score=282, Evalue=2e-77, Organism=Escherichia coli, GI48994883, Length=332, Percent_Identity=44.2771084337349, Blast_Score=282, Evalue=2e-77, Organism=Escherichia coli, GI1787759, Length=333, Percent_Identity=42.042042042042, Blast_Score=272, Evalue=3e-74, Organism=Escherichia coli, GI145693107, Length=283, Percent_Identity=43.4628975265018, Blast_Score=248, Evalue=6e-67, Organism=Escherichia coli, GI1788506, Length=273, Percent_Identity=43.956043956044, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI1787548, Length=314, Percent_Identity=37.2611464968153, Blast_Score=211, Evalue=4e-56, Organism=Escherichia coli, GI1789962, Length=325, Percent_Identity=37.2307692307692, Blast_Score=211, Evalue=6e-56, Organism=Escherichia coli, GI1787500, Length=343, Percent_Identity=38.7755102040816, Blast_Score=210, Evalue=8e-56, Organism=Escherichia coli, GI1787758, Length=348, Percent_Identity=37.6436781609195, Blast_Score=200, Evalue=1e-52, Organism=Escherichia coli, GI1789890, Length=268, Percent_Identity=35.4477611940299, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI48994997, Length=271, Percent_Identity=36.1623616236162, Blast_Score=144, Evalue=8e-36, Organism=Escherichia coli, GI1787547, Length=272, Percent_Identity=33.4558823529412, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1786398, Length=272, Percent_Identity=32.7205882352941, Blast_Score=137, Evalue=8e-34, Organism=Escherichia coli, GI1789891, Length=237, Percent_Identity=37.5527426160338, Blast_Score=131, Evalue=5e-32, Organism=Escherichia coli, GI1789032, Length=255, Percent_Identity=32.156862745098, Blast_Score=127, Evalue=7e-31, Organism=Escherichia coli, GI1788225, Length=268, Percent_Identity=33.2089552238806, Blast_Score=122, Evalue=5e-29, Organism=Escherichia coli, GI1788450, Length=291, Percent_Identity=28.1786941580756, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788761, Length=274, Percent_Identity=31.021897810219, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1787029, Length=271, Percent_Identity=29.8892988929889, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1786703, Length=250, Percent_Identity=32.4, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87081709, Length=267, Percent_Identity=29.2134831460674, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787712, Length=254, Percent_Identity=29.1338582677165, Blast_Score=101, Evalue=8e-23, Organism=Escherichia coli, GI87081834, Length=237, Percent_Identity=29.957805907173, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789672, Length=256, Percent_Identity=30.46875, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787370, Length=261, Percent_Identity=29.1187739463602, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=34.1772151898734, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1790162, Length=267, Percent_Identity=27.3408239700375, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI87081791, Length=274, Percent_Identity=30.6569343065693, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1786345, Length=232, Percent_Identity=31.8965517241379, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI48995001, Length=232, Percent_Identity=32.3275862068966, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1790739, Length=271, Percent_Identity=28.4132841328413, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786563, Length=243, Percent_Identity=31.6872427983539, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1787105, Length=232, Percent_Identity=31.4655172413793, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788644, Length=221, Percent_Identity=29.4117647058824, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789991, Length=286, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1786872, Length=234, Percent_Identity=30.7692307692308, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1786319, Length=258, Percent_Identity=29.0697674418605, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786803, Length=233, Percent_Identity=26.6094420600858, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789873, Length=230, Percent_Identity=28.695652173913, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1790544, Length=250, Percent_Identity=27.6, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789586, Length=260, Percent_Identity=28.0769230769231, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790467, Length=251, Percent_Identity=26.2948207171315, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082268, Length=254, Percent_Identity=27.9527559055118, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI87082267, Length=258, Percent_Identity=27.1317829457364, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790525, Length=248, Percent_Identity=28.2258064516129, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787164, Length=225, Percent_Identity=28.4444444444444, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI48994943, Length=256, Percent_Identity=24.21875, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790190, Length=239, Percent_Identity=24.6861924686192, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193211015, Length=258, Percent_Identity=29.0697674418605, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71996809, Length=258, Percent_Identity=29.0697674418605, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI193211017, Length=258, Percent_Identity=29.0697674418605, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25146777, Length=256, Percent_Identity=28.515625, Blast_Score=78, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17541710, Length=275, Percent_Identity=28, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17543740, Length=259, Percent_Identity=28.957528957529, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193208177, Length=243, Percent_Identity=27.1604938271605, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17565938, Length=266, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992290, Length=268, Percent_Identity=28.3582089552239, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71984940, Length=258, Percent_Identity=27.5193798449612, Blast_Score=64, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17567269, Length=237, Percent_Identity=28.2700421940928, Blast_Score=64, Evalue=1e-10, Organism=Drosophila melanogaster, GI221512771, Length=239, Percent_Identity=27.1966527196653, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=241, Percent_Identity=29.045643153527, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI85724864, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24580555, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI85816269, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24580553, Length=257, Percent_Identity=26.4591439688716, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24643674, Length=268, Percent_Identity=24.6268656716418, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24641565, Length=234, Percent_Identity=28.6324786324786, Blast_Score=66, Evalue=4e-11, Organism=Drosophila melanogaster, GI21357907, Length=257, Percent_Identity=27.6264591439689, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR010066 - InterPro: IPR013563 [H]
Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]
EC number: NA
Molecular weight: Translated: 37275; Mature: 37275
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEIRNLKVVFETDRGVVKAVNGIDLTLERGKILGLVGESGSGKSMTLLSILRLVPYPGK CCEEEEEEEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCC IVEGEILFEGEDLLKKSASQMREIRGKDIAMIFQDPMTTLNPVFPVGEQIRESLRVHNII EECCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHCC KPEKEGILGFLRERDRRKKEYEKAVELMEKVGISYPEKRYFSYPHQFSGGMQQRAIIAIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCEEEEEE LSCNPKLLLADEPTTALDVTIQAQILDLLRQINEVNGTSIIFVTHDLAVAAEFCDEIAVM EECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHH YAGQIVEKGAVDKVIGEPKHPYTKGLLKSIPKITRKKEKLYAIPGNVPDLASLSPKGCPF HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCH YERCEEAVEECKEVELPLIEVSDGEFVRCIKYL HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCC >Mature Secondary Structure MLEIRNLKVVFETDRGVVKAVNGIDLTLERGKILGLVGESGSGKSMTLLSILRLVPYPGK CCEEEEEEEEEECCCCCEEECCCCEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCCC IVEGEILFEGEDLLKKSASQMREIRGKDIAMIFQDPMTTLNPVFPVGEQIRESLRVHNII EECCEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHCC KPEKEGILGFLRERDRRKKEYEKAVELMEKVGISYPEKRYFSYPHQFSGGMQQRAIIAIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHCCCCCCCEEEEEE LSCNPKLLLADEPTTALDVTIQAQILDLLRQINEVNGTSIIFVTHDLAVAAEFCDEIAVM EECCCEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHH YAGQIVEKGAVDKVIGEPKHPYTKGLLKSIPKITRKKEKLYAIPGNVPDLASLSPKGCPF HHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHCCCCCCCCH YERCEEAVEECKEVELPLIEVSDGEFVRCIKYL HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; dipeptides [Periplasm]; H2O [C]
Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1901616; 1899858; 9384377 [H]