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The map label for this gene is Udk [H]

Identifier: 20808197

GI number: 20808197

Start: 1725055

End: 1726698

Strand: Reverse

Name: Udk [H]

Synonym: TTE1778

Alternate gene names: 20808197

Gene position: 1726698-1725055 (Counterclockwise)

Preceding gene: 20808199

Following gene: 20808196

Centisome position: 64.2

GC content: 35.95

Gene sequence:

>1644_bases
ATGAAAATTATCGTCAAAGACAGGGAATACGAATACCCTGAAAATACTAGGTTAGAAGATATTGCTAGAGATTTTGAACA
CCTTTATAACGGAATAATAGTGGCAGCGAAAGTGAATAACGAATTGAGGGATTTGAATTGTACAATTTCTGAGGATAGTG
TAGTAGAATTTGTGGATACTACTGTAGAAGAAGGGACAAGAATATATAGGAGAAGTCTTACTTTTGTGTTTATAAAGGCT
GTAAAAGAGCTTCTACCAGGTGCTACTGTTACAATAGAACATTCCCTCGGGAAAGGCTTGTACTGTGAAATTCACGGTTA
TTCCATAAACAATAAGATAGTAGCATCGATTAAGGATAAAATGAAGGAAATAATAGATAAGAATTTGAAAATAGAGAGAA
AAATGCTTCCTAGAGAAGAAGCCATAAGGCTTTTTGAAAAAGAAGGTTTAATGGAAAAAGTTAGGCTTTTTAAAGATACT
GATAAAGAGAAAGTACCTGTTTATTACTGTGATGGCACAGTTGACTTTTTCTACAGTCCTTGCGTTCCATCAACAGGGTA
TTTAAAAGTATTTGACATAAGATTTTATTTCCCTGGAGTCATTTTGATTGCACCAGATATCTACAATCCACGTTCTCTTC
CTGTATTTGTGGATGTTCCAAAACTTGCTTCTATATTTAAAGAGGCAGAAGAATGGGCTCATATATTGGATATAAATTAT
GTGGCTTCTTTAAATGACCTCATAAAAAGAGGGGGAGCAAGAGATTTAATCCTGGTTTCCGAGGCTTTTCATGAGAAGAA
AATTTCAAAAATAGCTGATTACATCGCTTCAAATAAAATGATAAAAGTAGTCCTTATTGCTGGACCTTCTTCTTCAGGGA
AAACTTCTTTCATTCATAGGCTTAGCGTACAGCTCAGGGTAAACGGGTTAAAGCCTTTTGCTATTTCTCTGGACAATTAT
TTTGTTCCAAGAGAGCTTACTCCTCGGGATGAGTTTGGCAATTACGACTTCGAATCTATCGATGCCCTAGATTTGCCGCT
TTTTAATGAACATTTGATAAAACTTATACAGGGTGAAGAAGTAGAAATCCCTATTTTTAATTTTAAAACAGGGGAGAGAG
AGCCTGTAGGGAGAAAAGTTAAACTTGAGAAAAATCAGATTATCCTCATGGAGGGAATTCATGGACTTAATGAAAAGCTT
ACTATCCAAATTCCGAAAGACAATAAGTATAAAATATATGTAAGCGCAATAACTCAGCTTAATTTAGATGAACACAATAG
AATTCCAACTTCTCAGACAAGGCTTATAAGGCGAATAGTTAGGGACAGTCAATTTAGGTCTACAGATGCGGCGGAGACTA
TAAATATGTGGCCTAGGGTGAGGAAAGGAGAAGAACGCTGGATTTTCCCATATCAGGAGCAAGCGGATGTCATGTTCAAC
TCCTTCTTGCCCTATGAACTTCCTGTATTAAAAAAATACGCTGAACCCCTTTTAAAGAAGGTTTCCAAAGATGACCCTGC
TTACTCTATTGCAAAAGAGATGCTGGAATTTTTAAGCTATTTTTATCCAATAGAAGATGAACTTGCTATTCCGCCTAATT
CAATCATAAGAGAATTTATAGGTGGAAGCTGTCTGGATGTGTGA

Upstream 100 bases:

>100_bases
AAACATAGCCGTACGGCTCCGTGGGTAAAGTTAAAAGCCCCTTTTTGGGGCTTTTATTTTTTTATAAAATTGGAGTATAA
TAGTGTCGAGGTGAATTTTT

Downstream 100 bases:

>100_bases
GAAGAGGGGCTATATGTGTCCCTTTTTGTTTTTACAAAGAAGGGAATCGTATAATTTTGTAGAAATGAAAAATAAAAGGG
CTTTAATATTTTTTTACAAA

Product: uridine kinase

Products: NA

Alternate protein names: Threonine--tRNA ligase; ThrRS [H]

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MKIIVKDREYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDTTVEEGTRIYRRSLTFVFIKA
VKELLPGATVTIEHSLGKGLYCEIHGYSINNKIVASIKDKMKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKDT
DKEKVPVYYCDGTVDFFYSPCVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILDINY
VASLNDLIKRGGARDLILVSEAFHEKKISKIADYIASNKMIKVVLIAGPSSSGKTSFIHRLSVQLRVNGLKPFAISLDNY
FVPRELTPRDEFGNYDFESIDALDLPLFNEHLIKLIQGEEVEIPIFNFKTGEREPVGRKVKLEKNQIILMEGIHGLNEKL
TIQIPKDNKYKIYVSAITQLNLDEHNRIPTSQTRLIRRIVRDSQFRSTDAAETINMWPRVRKGEERWIFPYQEQADVMFN
SFLPYELPVLKKYAEPLLKKVSKDDPAYSIAKEMLEFLSYFYPIEDELAIPPNSIIREFIGGSCLDV

Sequences:

>Translated_547_residues
MKIIVKDREYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDTTVEEGTRIYRRSLTFVFIKA
VKELLPGATVTIEHSLGKGLYCEIHGYSINNKIVASIKDKMKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKDT
DKEKVPVYYCDGTVDFFYSPCVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILDINY
VASLNDLIKRGGARDLILVSEAFHEKKISKIADYIASNKMIKVVLIAGPSSSGKTSFIHRLSVQLRVNGLKPFAISLDNY
FVPRELTPRDEFGNYDFESIDALDLPLFNEHLIKLIQGEEVEIPIFNFKTGEREPVGRKVKLEKNQIILMEGIHGLNEKL
TIQIPKDNKYKIYVSAITQLNLDEHNRIPTSQTRLIRRIVRDSQFRSTDAAETINMWPRVRKGEERWIFPYQEQADVMFN
SFLPYELPVLKKYAEPLLKKVSKDDPAYSIAKEMLEFLSYFYPIEDELAIPPNSIIREFIGGSCLDV
>Mature_547_residues
MKIIVKDREYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDTTVEEGTRIYRRSLTFVFIKA
VKELLPGATVTIEHSLGKGLYCEIHGYSINNKIVASIKDKMKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKDT
DKEKVPVYYCDGTVDFFYSPCVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILDINY
VASLNDLIKRGGARDLILVSEAFHEKKISKIADYIASNKMIKVVLIAGPSSSGKTSFIHRLSVQLRVNGLKPFAISLDNY
FVPRELTPRDEFGNYDFESIDALDLPLFNEHLIKLIQGEEVEIPIFNFKTGEREPVGRKVKLEKNQIILMEGIHGLNEKL
TIQIPKDNKYKIYVSAITQLNLDEHNRIPTSQTRLIRRIVRDSQFRSTDAAETINMWPRVRKGEERWIFPYQEQADVMFN
SFLPYELPVLKKYAEPLLKKVSKDDPAYSIAKEMLEFLSYFYPIEDELAIPPNSIIREFIGGSCLDV

Specific function: Thrs Is Also A Translational Repressor Protein, It Controls The Translation Of Its Own Gene By Binding To Its mRNA. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: 700 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002314
- InterPro:   IPR006195
- InterPro:   IPR004154
- InterPro:   IPR012675
- InterPro:   IPR004095
- InterPro:   IPR012676
- InterPro:   IPR002320
- InterPro:   IPR018163
- InterPro:   IPR012947 [H]

Pfam domain/function: PF03129 HGTP_anticodon; PF02824 TGS; PF00587 tRNA-synt_2b; PF07973 tRNA_SAD [H]

EC number: =6.1.1.3 [H]

Molecular weight: Translated: 63150; Mature: 63150

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIVKDREYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDT
CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCHHHHHHHH
TVEEGTRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYSINNKIVASIKDK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECEECCCHHHHHHHHH
MKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKDTDKEKVPVYYCDGTVDFFYSP
HHHHHCCCCEEHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCEEEEECC
CVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILDINY
CCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH
VASLNDLIKRGGARDLILVSEAFHEKKISKIADYIASNKMIKVVLIAGPSSSGKTSFIHR
HHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHEEEE
LSVQLRVNGLKPFAISLDNYFVPRELTPRDEFGNYDFESIDALDLPLFNEHLIKLIQGEE
EEEEEEECCCCCEEEECCCEECCCCCCCCHHCCCCCCCCCCEECCCHHHHHHHHHHCCCC
VEIPIFNFKTGEREPVGRKVKLEKNQIILMEGIHGLNEKLTIQIPKDNKYKIYVSAITQL
EEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEEC
NLDEHNRIPTSQTRLIRRIVRDSQFRSTDAAETINMWPRVRKGEERWIFPYQEQADVMFN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHH
SFLPYELPVLKKYAEPLLKKVSKDDPAYSIAKEMLEFLSYFYPIEDELAIPPNSIIREFI
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GGSCLDV
CCCCCCC
>Mature Secondary Structure
MKIIVKDREYEYPENTRLEDIARDFEHLYNGIIVAAKVNNELRDLNCTISEDSVVEFVDT
CEEEEECCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCEEEECCCHHHHHHHH
TVEEGTRIYRRSLTFVFIKAVKELLPGATVTIEHSLGKGLYCEIHGYSINNKIVASIKDK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECEECCCHHHHHHHHH
MKEIIDKNLKIERKMLPREEAIRLFEKEGLMEKVRLFKDTDKEKVPVYYCDGTVDFFYSP
HHHHHCCCCEEHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEECCCEEEEECC
CVPSTGYLKVFDIRFYFPGVILIAPDIYNPRSLPVFVDVPKLASIFKEAEEWAHILDINY
CCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHH
VASLNDLIKRGGARDLILVSEAFHEKKISKIADYIASNKMIKVVLIAGPSSSGKTSFIHR
HHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHEEEE
LSVQLRVNGLKPFAISLDNYFVPRELTPRDEFGNYDFESIDALDLPLFNEHLIKLIQGEE
EEEEEEECCCCCEEEECCCEECCCCCCCCHHCCCCCCCCCCEECCCHHHHHHHHHHCCCC
VEIPIFNFKTGEREPVGRKVKLEKNQIILMEGIHGLNEKLTIQIPKDNKYKIYVSAITQL
EEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCCCCCEEEEEECCCCCEEEEEEEEEEC
NLDEHNRIPTSQTRLIRRIVRDSQFRSTDAAETINMWPRVRKGEERWIFPYQEQADVMFN
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCEECCCCHHHHHHHH
SFLPYELPVLKKYAEPLLKKVSKDDPAYSIAKEMLEFLSYFYPIEDELAIPPNSIIREFI
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
GGSCLDV
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA