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The map label for this gene is Tar8 [H]

Identifier: 20808196

GI number: 20808196

Start: 1723376

End: 1724911

Strand: Reverse

Name: Tar8 [H]

Synonym: TTE1777

Alternate gene names: 20808196

Gene position: 1724911-1723376 (Counterclockwise)

Preceding gene: 20808197

Following gene: 20808195

Centisome position: 64.14

GC content: 37.11

Gene sequence:

>1536_bases
ATGGCTATTTTTTATTACATGGCAGGAGTTATTGCAATTATTTTAGTAGTAGCTTTTTTGTACTGGTGGATAGTTAAAAG
GCGTGTAACTTTGGTGTTAAGGGAAATGAAGGAGGCAATTGATTCAATTGCAAAAGGGGACCTGTCAAGAAAAGTTGACA
TAAAAGGCGATAAAGAGTTAAAAGAACTGGCTAAATCTCTCAATAGCTTCTTGGAAAATTTTAAAACGCTTATTATGGAG
TCTCAGCAGACCGCAGAGCAAACAGTGGTGGGTTCAAAAAAATTGATGATTGCAATTGATAACGTTACCACTGCTGCAAA
AGAAATTTCAACTGCCTTAGAAGAAATTGCAAAAGGAGCAGAGGAACAAGCGGTAGCTGCACAGAAGACAGCCAAAAATG
CCAGTGAGGCTTTTGAGCTGAATGAAAAGGTTAAGAATAAATTTGAAGAGACAAAGAATTTAAGTATTAGTATGGAAAAA
GAGATTAAAGAAAATGAAGAGATTATGCTAGAACTAATGAAGAGGATGGAGGAAAGTGCTAATAAAAACAAAAAACTTAT
AGAGGAAGTATCTGAATTAAGAGAAAGGGCAAATAAAATAACTGACATAATCGGAATGGTAAACAAAATTGCTGACCAGA
CAAATTTACTGGCATTGAATGCAGCAATTGAAGCAGCAAGAGCGGGAGAACATGGAAAAGGGTTTGCAGTTGTAGCAGAA
GAGGTGAGAAAACTTGCAGAGCAGTCAGCTTCTGCAGCGGGGGAAATAGTGCTTCTCACAAAAAGCATTCAAGATAAAAT
AAAAGAAGTTTCAGTGAAATTGGAGGAAGAGATTAAAGGAGTATTGGAAAATTTATCTTATGCAAATCAGGTAAAAGACA
AACTAGAAAGCGTTGTAAATGCAAGTGAAAATGTGGTGGAGGCAGTTGCTTTTGTGGACGATCTTGTCAATTCTCAATAC
GAAAAAATAAAAGAGATTGCGGAATTAAATCATAAGATTGCAGCAGTGACACAGGAGACTGCAGCGAATACGGAGGAGAC
CTTGGCTTCTACAGAAGAACAGGTGTCTTCTATGGAAGAGCTAAGAGAGATGATGAACCGCCTGGATAGCTTTGCTGAAA
AACTTCAAAATCTAGTGAAGAAGTTCTCAGGAACAGTAAAGCTTACAGTGGAACAAAAGAGAAGAGTAGAAGAGGCAAAA
AAAATACTGCAAAGAATAGCGGAAGAAAAAGGAGAAGAGTTGTTTGGAGATAGAGCAAAGGATATAATCATGGATATTGT
GAAAAGATATCCTAATTTTGAATTGGCTTTTTCAATACTGGGAAATGGAGATATAAAAGCGATTTCTGTTGAAGTTGATA
TATCTAATGTGTATCACAGAACCTGGTTTCAGAGGGCTATTGAGGGGGAAGTGACAGTAACAGAGCCTTACATTTCTTTG
GCGACAAATGAAATTTGCGTGACAATAGCAATTCCTGTCTACAAGGGAGAGAAAGTAATTGGAGTTTTTGGAGGAGACGT
TCAATTAGGCAAATAA

Upstream 100 bases:

>100_bases
GAATCGTATAATTTTGTAGAAATGAAAAATAAAAGGGCTTTAATATTTTTTTACAAATGCCGATTTTTTAGTTAGATACT
AAATGAGGAGGAGGACTGTT

Downstream 100 bases:

>100_bases
AAGAGAAAAATATGCATAAAATAAAATAGATTATAGTTGAAATATTATTTTTAAAGTGGTATAATATGCTTGAAATGGAA
TTTGGGTTTTTTGGGTCAAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3 [H]

Number of amino acids: Translated: 511; Mature: 510

Protein sequence:

>511_residues
MAIFYYMAGVIAIILVVAFLYWWIVKRRVTLVLREMKEAIDSIAKGDLSRKVDIKGDKELKELAKSLNSFLENFKTLIME
SQQTAEQTVVGSKKLMIAIDNVTTAAKEISTALEEIAKGAEEQAVAAQKTAKNASEAFELNEKVKNKFEETKNLSISMEK
EIKENEEIMLELMKRMEESANKNKKLIEEVSELRERANKITDIIGMVNKIADQTNLLALNAAIEAARAGEHGKGFAVVAE
EVRKLAEQSASAAGEIVLLTKSIQDKIKEVSVKLEEEIKGVLENLSYANQVKDKLESVVNASENVVEAVAFVDDLVNSQY
EKIKEIAELNHKIAAVTQETAANTEETLASTEEQVSSMEELREMMNRLDSFAEKLQNLVKKFSGTVKLTVEQKRRVEEAK
KILQRIAEEKGEELFGDRAKDIIMDIVKRYPNFELAFSILGNGDIKAISVEVDISNVYHRTWFQRAIEGEVTVTEPYISL
ATNEICVTIAIPVYKGEKVIGVFGGDVQLGK

Sequences:

>Translated_511_residues
MAIFYYMAGVIAIILVVAFLYWWIVKRRVTLVLREMKEAIDSIAKGDLSRKVDIKGDKELKELAKSLNSFLENFKTLIME
SQQTAEQTVVGSKKLMIAIDNVTTAAKEISTALEEIAKGAEEQAVAAQKTAKNASEAFELNEKVKNKFEETKNLSISMEK
EIKENEEIMLELMKRMEESANKNKKLIEEVSELRERANKITDIIGMVNKIADQTNLLALNAAIEAARAGEHGKGFAVVAE
EVRKLAEQSASAAGEIVLLTKSIQDKIKEVSVKLEEEIKGVLENLSYANQVKDKLESVVNASENVVEAVAFVDDLVNSQY
EKIKEIAELNHKIAAVTQETAANTEETLASTEEQVSSMEELREMMNRLDSFAEKLQNLVKKFSGTVKLTVEQKRRVEEAK
KILQRIAEEKGEELFGDRAKDIIMDIVKRYPNFELAFSILGNGDIKAISVEVDISNVYHRTWFQRAIEGEVTVTEPYISL
ATNEICVTIAIPVYKGEKVIGVFGGDVQLGK
>Mature_510_residues
AIFYYMAGVIAIILVVAFLYWWIVKRRVTLVLREMKEAIDSIAKGDLSRKVDIKGDKELKELAKSLNSFLENFKTLIMES
QQTAEQTVVGSKKLMIAIDNVTTAAKEISTALEEIAKGAEEQAVAAQKTAKNASEAFELNEKVKNKFEETKNLSISMEKE
IKENEEIMLELMKRMEESANKNKKLIEEVSELRERANKITDIIGMVNKIADQTNLLALNAAIEAARAGEHGKGFAVVAEE
VRKLAEQSASAAGEIVLLTKSIQDKIKEVSVKLEEEIKGVLENLSYANQVKDKLESVVNASENVVEAVAFVDDLVNSQYE
KIKEIAELNHKIAAVTQETAANTEETLASTEEQVSSMEELREMMNRLDSFAEKLQNLVKKFSGTVKLTVEQKRRVEEAKK
ILQRIAEEKGEELFGDRAKDIIMDIVKRYPNFELAFSILGNGDIKAISVEVDISNVYHRTWFQRAIEGEVTVTEPYISLA
TNEICVTIAIPVYKGEKVIGVFGGDVQLGK

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=304, Percent_Identity=29.2763157894737, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1788195, Length=321, Percent_Identity=27.4143302180685, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1788194, Length=363, Percent_Identity=26.1707988980716, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787690, Length=358, Percent_Identity=26.536312849162, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1789453, Length=282, Percent_Identity=28.7234042553192, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57077; Mature: 56946

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIFYYMAGVIAIILVVAFLYWWIVKRRVTLVLREMKEAIDSIAKGDLSRKVDIKGDKEL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHH
KELAKSLNSFLENFKTLIMESQQTAEQTVVGSKKLMIAIDNVTTAAKEISTALEEIAKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
EEQAVAAQKTAKNASEAFELNEKVKNKFEETKNLSISMEKEIKENEEIMLELMKRMEESA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHHH
NKNKKLIEEVSELRERANKITDIIGMVNKIADQTNLLALNAAIEAARAGEHGKGFAVVAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
EVRKLAEQSASAAGEIVLLTKSIQDKIKEVSVKLEEEIKGVLENLSYANQVKDKLESVVN
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASENVVEAVAFVDDLVNSQYEKIKEIAELNHKIAAVTQETAANTEETLASTEEQVSSMEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LREMMNRLDSFAEKLQNLVKKFSGTVKLTVEQKRRVEEAKKILQRIAEEKGEELFGDRAK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHH
DIIMDIVKRYPNFELAFSILGNGDIKAISVEVDISNVYHRTWFQRAIEGEVTVTEPYISL
HHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHCCCEEEECCHHHH
ATNEICVTIAIPVYKGEKVIGVFGGDVQLGK
CCCCEEEEEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure 
AIFYYMAGVIAIILVVAFLYWWIVKRRVTLVLREMKEAIDSIAKGDLSRKVDIKGDKEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHH
KELAKSLNSFLENFKTLIMESQQTAEQTVVGSKKLMIAIDNVTTAAKEISTALEEIAKGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHCCC
EEQAVAAQKTAKNASEAFELNEKVKNKFEETKNLSISMEKEIKENEEIMLELMKRMEESA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHHHHHHHHHH
NKNKKLIEEVSELRERANKITDIIGMVNKIADQTNLLALNAAIEAARAGEHGKGFAVVAE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
EVRKLAEQSASAAGEIVLLTKSIQDKIKEVSVKLEEEIKGVLENLSYANQVKDKLESVVN
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
ASENVVEAVAFVDDLVNSQYEKIKEIAELNHKIAAVTQETAANTEETLASTEEQVSSMEE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LREMMNRLDSFAEKLQNLVKKFSGTVKLTVEQKRRVEEAKKILQRIAEEKGEELFGDRAK
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHH
DIIMDIVKRYPNFELAFSILGNGDIKAISVEVDISNVYHRTWFQRAIEGEVTVTEPYISL
HHHHHHHHHCCCCEEEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHCCCEEEECCHHHH
ATNEICVTIAIPVYKGEKVIGVFGGDVQLGK
CCCCEEEEEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377 [H]