| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is yunF [H]
Identifier: 20808169
GI number: 20808169
Start: 1696475
End: 1697215
Strand: Direct
Name: yunF [H]
Synonym: TTE1750
Alternate gene names: 20808169
Gene position: 1696475-1697215 (Clockwise)
Preceding gene: 20808164
Following gene: 20808186
Centisome position: 63.08
GC content: 37.38
Gene sequence:
>741_bases ATGGGGAAAAAGCTCTACATAGGGACATCCGGTTGGGCATACTCCCACTGGAAAGAAATTTTTTATCCTTCTAACCTTCC TTATGAAGAAAGGCTTAGCTTTTATTCAAAGCATTTTCTGAGCGCTGAAGTAAATTCTTCTTTCTACCACTTACCTCAAG AAAAAACTTTGATGAAATGGTATACCTCTACTCCTGAAGGTTTCATCTTTTCTGTAAAAGCCTCCCGCCACATAACTCAC TTAAAAAAACTTTGTGATGTGGAAGAAGCGTGGAACAATTTCAAAAAAAGGATAGACCTGTTGAAGGACAAGTTAGGACC TATTCTCCTGCAATTCCCTCCAAGTTTTAAAAAAGACCAAGAAAATGTAGAAAAAATCATAAACTTTTTAAGAGGGAAAG AAAACTACAAATTTGCCTTGGAATTCAGGCATAAAAGCTGGCTTGATGAAGAAGTCTATGACCTTATGAGGAAATTGAAA GTCGCCTGGGTAATAGCAGATTCCTCCCGGTATCCTAAGGCAAAAGTTGTCACAGCAGATTTTGCTTACATTAGAATGCA TGGGCCTGAAGCTTTGTTCAGTTCCTCCTATTCAGAAGAAGAACTTGAGGAATTGGCAAAAGACATAGAAGAATATTTAA AAAATTGCGATGAAATTTACGTGTATTTCAACAATGACGTCAACGGCTGCGCAATTCAAAATGCCAAAACTTTAATAAAA CTCACGGCACATATGCTTTGA
Upstream 100 bases:
>100_bases AAGATATGCAACTCCCTAATTTGACAAAACTATTGTCATATAGATTTTTTGTGTTGTATCATACTCTTAAAAGCAACACA TTCTGAAAGGAGGAAAAAAG
Downstream 100 bases:
>100_bases GAAATTTAGCTTTTCCTTTAACTTTGTATTTATCTACAAAAGCGGGTATGACAATAGTTTCTCCTGCCTTTACTACTTTT GTCCCTTCTTCCCACTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MGKKLYIGTSGWAYSHWKEIFYPSNLPYEERLSFYSKHFLSAEVNSSFYHLPQEKTLMKWYTSTPEGFIFSVKASRHITH LKKLCDVEEAWNNFKKRIDLLKDKLGPILLQFPPSFKKDQENVEKIINFLRGKENYKFALEFRHKSWLDEEVYDLMRKLK VAWVIADSSRYPKAKVVTADFAYIRMHGPEALFSSSYSEEELEELAKDIEEYLKNCDEIYVYFNNDVNGCAIQNAKTLIK LTAHML
Sequences:
>Translated_246_residues MGKKLYIGTSGWAYSHWKEIFYPSNLPYEERLSFYSKHFLSAEVNSSFYHLPQEKTLMKWYTSTPEGFIFSVKASRHITH LKKLCDVEEAWNNFKKRIDLLKDKLGPILLQFPPSFKKDQENVEKIINFLRGKENYKFALEFRHKSWLDEEVYDLMRKLK VAWVIADSSRYPKAKVVTADFAYIRMHGPEALFSSSYSEEELEELAKDIEEYLKNCDEIYVYFNNDVNGCAIQNAKTLIK LTAHML >Mature_245_residues GKKLYIGTSGWAYSHWKEIFYPSNLPYEERLSFYSKHFLSAEVNSSFYHLPQEKTLMKWYTSTPEGFIFSVKASRHITHL KKLCDVEEAWNNFKKRIDLLKDKLGPILLQFPPSFKKDQENVEKIINFLRGKENYKFALEFRHKSWLDEEVYDLMRKLKV AWVIADSSRYPKAKVVTADFAYIRMHGPEALFSSSYSEEELEELAKDIEEYLKNCDEIYVYFNNDVNGCAIQNAKTLIKL TAHML
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 29045; Mature: 28913
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKLYIGTSGWAYSHWKEIFYPSNLPYEERLSFYSKHFLSAEVNSSFYHLPQEKTLMKW CCCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH YTSTPEGFIFSVKASRHITHLKKLCDVEEAWNNFKKRIDLLKDKLGPILLQFPPSFKKDQ HCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCH ENVEKIINFLRGKENYKFALEFRHKSWLDEEVYDLMRKLKVAWVIADSSRYPKAKVVTAD HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEEEEC FAYIRMHGPEALFSSSYSEEELEELAKDIEEYLKNCDEIYVYFNNDVNGCAIQNAKTLIK EEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHH LTAHML HHHHCC >Mature Secondary Structure GKKLYIGTSGWAYSHWKEIFYPSNLPYEERLSFYSKHFLSAEVNSSFYHLPQEKTLMKW CCEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH YTSTPEGFIFSVKASRHITHLKKLCDVEEAWNNFKKRIDLLKDKLGPILLQFPPSFKKDQ HCCCCCCEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCH ENVEKIINFLRGKENYKFALEFRHKSWLDEEVYDLMRKLKVAWVIADSSRYPKAKVVTAD HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHEEEEEEECCCCCCCEEEEEEC FAYIRMHGPEALFSSSYSEEELEELAKDIEEYLKNCDEIYVYFNNDVNGCAIQNAKTLIK EEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHH LTAHML HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]