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The map label for this gene is CodB

Identifier: 20808154

GI number: 20808154

Start: 1678387

End: 1679565

Strand: Reverse

Name: CodB

Synonym: TTE1730

Alternate gene names: NA

Gene position: 1679565-1678387 (Counterclockwise)

Preceding gene: 20808155

Following gene: 20808153

Centisome position: 62.45

GC content: 31.89

Gene sequence:

>1179_bases
ATGAAAATTAAAAATTTTACCCTTTTTCTAATATGGGCAGGTGCAGCAATCTCAATTGCTGAAATCTATACAGGTTCGCT
ATTTGCACCTCTGGGTTTAACTAAAGGTTTGTTGGCTATTTTAATAGGCCATATCATTGGTACATTATTTTTCTCGCTTG
GGGGTCTTATGTCATATATCCTCAAGTTGCCAGCAATAAAATCAACAAAAGTTGTTTTGTGCAATAAGGGTACAATTTTT
TTAGGGGCACTAAACATTTTGCAATTGATTGGATGGACAGCAGTCATGATTATACAATCAGCAAAAGCTTTTAATGGTGC
TCTTGGTATGTCTGTTAGTGTAGGAATACTTTTTGTAGGCATATCTGTTTTATTATGGTCACTATTTTTTGAAAGTGAAG
CATACTGGGTAAATAACATTGCAGTAATATTGTTGTTTATATTGACTATTGGTGTTGTAGCATTTTTAAAGGGCGGGGAA
ATTTTAACACCAGAAGGTAACATAAGTTTTGCAGATGCAATCGAACTTGCCGTTGCTATGCCTGTATCCTGGCTGCCTTT
AGTAGGAGATTATACGATCAACAGTGAAAATAGAAAATCTAGCTTTATATATACATTTTTAGGTTATTTTATTGCAAGCT
GCTTTATGTATTTTATAGGGCTTTTTGTTTCCTTAAAGACGGGAGGGAAAGATATAATTTCATATTTTGCATCAATAAAA
TCTGGGTTTATACCATTGCTAATAATACTTTTATCAACAGTGACAACCACTTTTATGGATGTATACTCTGCTGCGATATC
TACAATGGCAGTTATTAAAACAAGGCTCAGTAAAAAAGAGCTATTAATAATTTATTCGCTGACAGGTATCATAGCAGCAT
ATCTATTCCCAATTGATAAATATCAAAACTTTTTATATGCTATCGGTAGTGTATTTATTCCAGTATACACAGTAGTTTTT
GTAGGCTTCTTTATATTAAAATATGAAGAAAGTGGGTACCTTAATATTCCTGCAGTTGTATCATCTATCATTGGAATTAT
TACGTATAATTACATGGTATATAACGGTACTTCATTATTGAAATGGTATCTAACTCCTACTATAACAACAATATTTTTGA
CTGCTTTAATTTATACTGTAACACAAACTTTTTTTAAGAGAAAAGAGAAAATTTTGTGA

Upstream 100 bases:

>100_bases
AGTACAATAGGCTCGGTGATAGGATATGTAGTGGTATTGGTTTTAGCAAAATATAAGAAATTTATCTCATAAATTTAAAT
TAAGAAAGCAGGTGTGAATT

Downstream 100 bases:

>100_bases
TTGATGAAATTGTAAAAACTCTTGAACGACGTAAAAGGGAAAGTGCCACTTATACATGTCATCACAAATTATGTTGTGAT
GAATGATAATGCAAACGCAC

Product: purine-cytosine permease and related proteins

Products: NA

Alternate protein names: Permease For Cytosine/Purines Uracil Thiamine Allantoin; Permease; Cytosine Permease; Thiamine/Thiamine Cation Symporter; CytX-Like Hydroxymethylpyrimidine Transporter Protein; Purine-Cytosine Permease ; Cytosine/Purines/Uracil Permease; NCS1 Nucleoside Transporter

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKIKNFTLFLIWAGAAISIAEIYTGSLFAPLGLTKGLLAILIGHIIGTLFFSLGGLMSYILKLPAIKSTKVVLCNKGTIF
LGALNILQLIGWTAVMIIQSAKAFNGALGMSVSVGILFVGISVLLWSLFFESEAYWVNNIAVILLFILTIGVVAFLKGGE
ILTPEGNISFADAIELAVAMPVSWLPLVGDYTINSENRKSSFIYTFLGYFIASCFMYFIGLFVSLKTGGKDIISYFASIK
SGFIPLLIILLSTVTTTFMDVYSAAISTMAVIKTRLSKKELLIIYSLTGIIAAYLFPIDKYQNFLYAIGSVFIPVYTVVF
VGFFILKYEESGYLNIPAVVSSIIGIITYNYMVYNGTSLLKWYLTPTITTIFLTALIYTVTQTFFKRKEKIL

Sequences:

>Translated_392_residues
MKIKNFTLFLIWAGAAISIAEIYTGSLFAPLGLTKGLLAILIGHIIGTLFFSLGGLMSYILKLPAIKSTKVVLCNKGTIF
LGALNILQLIGWTAVMIIQSAKAFNGALGMSVSVGILFVGISVLLWSLFFESEAYWVNNIAVILLFILTIGVVAFLKGGE
ILTPEGNISFADAIELAVAMPVSWLPLVGDYTINSENRKSSFIYTFLGYFIASCFMYFIGLFVSLKTGGKDIISYFASIK
SGFIPLLIILLSTVTTTFMDVYSAAISTMAVIKTRLSKKELLIIYSLTGIIAAYLFPIDKYQNFLYAIGSVFIPVYTVVF
VGFFILKYEESGYLNIPAVVSSIIGIITYNYMVYNGTSLLKWYLTPTITTIFLTALIYTVTQTFFKRKEKIL
>Mature_392_residues
MKIKNFTLFLIWAGAAISIAEIYTGSLFAPLGLTKGLLAILIGHIIGTLFFSLGGLMSYILKLPAIKSTKVVLCNKGTIF
LGALNILQLIGWTAVMIIQSAKAFNGALGMSVSVGILFVGISVLLWSLFFESEAYWVNNIAVILLFILTIGVVAFLKGGE
ILTPEGNISFADAIELAVAMPVSWLPLVGDYTINSENRKSSFIYTFLGYFIASCFMYFIGLFVSLKTGGKDIISYFASIK
SGFIPLLIILLSTVTTTFMDVYSAAISTMAVIKTRLSKKELLIIYSLTGIIAAYLFPIDKYQNFLYAIGSVFIPVYTVVF
VGFFILKYEESGYLNIPAVVSSIIGIITYNYMVYNGTSLLKWYLTPTITTIFLTALIYTVTQTFFKRKEKIL

Specific function: Unknown

COG id: COG1457

COG function: function code F; Purine-cytosine permease and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43134; Mature: 43134

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKNFTLFLIWAGAAISIAEIYTGSLFAPLGLTKGLLAILIGHIIGTLFFSLGGLMSYI
CCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLPAIKSTKVVLCNKGTIFLGALNILQLIGWTAVMIIQSAKAFNGALGMSVSVGILFVG
HHCCCCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ISVLLWSLFFESEAYWVNNIAVILLFILTIGVVAFLKGGEILTPEGNISFADAIELAVAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHC
PVSWLPLVGDYTINSENRKSSFIYTFLGYFIASCFMYFIGLFVSLKTGGKDIISYFASIK
CCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SGFIPLLIILLSTVTTTFMDVYSAAISTMAVIKTRLSKKELLIIYSLTGIIAAYLFPIDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
YQNFLYAIGSVFIPVYTVVFVGFFILKYEESGYLNIPAVVSSIIGIITYNYMVYNGTSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHEEECCCHHH
KWYLTPTITTIFLTALIYTVTQTFFKRKEKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIKNFTLFLIWAGAAISIAEIYTGSLFAPLGLTKGLLAILIGHIIGTLFFSLGGLMSYI
CCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKLPAIKSTKVVLCNKGTIFLGALNILQLIGWTAVMIIQSAKAFNGALGMSVSVGILFVG
HHCCCCCCCEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
ISVLLWSLFFESEAYWVNNIAVILLFILTIGVVAFLKGGEILTPEGNISFADAIELAVAM
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHC
PVSWLPLVGDYTINSENRKSSFIYTFLGYFIASCFMYFIGLFVSLKTGGKDIISYFASIK
CCHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SGFIPLLIILLSTVTTTFMDVYSAAISTMAVIKTRLSKKELLIIYSLTGIIAAYLFPIDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHH
YQNFLYAIGSVFIPVYTVVFVGFFILKYEESGYLNIPAVVSSIIGIITYNYMVYNGTSLL
HHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHEEECCCHHH
KWYLTPTITTIFLTALIYTVTQTFFKRKEKIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA