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The map label for this gene is RacX [C]

Identifier: 20808149

GI number: 20808149

Start: 1674467

End: 1675171

Strand: Reverse

Name: RacX [C]

Synonym: TTE1724

Alternate gene names: 20808149

Gene position: 1675171-1674467 (Counterclockwise)

Preceding gene: 20808151

Following gene: 20808147

Centisome position: 62.29

GC content: 37.73

Gene sequence:

>705_bases
ATGGGAAAAAAGAGAAAGATAGTTGGGATTCTGGGAGGATTAGGGCCGATGGCTACTGTAGATTTATTTCGTAGAATTGT
TGAATTTACTCCTGCTAAAGTAGACCAGGAACATTTGAGGATTATAATCGATTGTAATCCTCAGATACCAGATCGTACCA
AAGCTATTTTATATGGAGGTCCTGATCCTACTCCTGAGCTTATAGCGACAGCGAAGAATTTAGTGAAAGCAGGGGCTGAT
TTTATAGTAATTCCTTGTAACACAGCTCATTATTTCTTAGACTATTTAAAAAGAGAGGTAGATATCCCTATTATAAATAT
GATTGAAGAAACAGCCCGTTATGTAAGAAATAACTATCCTTATGCAGAATGCGTGGGCTTGTTAGCTACTTCGGGAACTA
TAAAAAGCAACCTTTACCATAAGGCTTTTAAAAAGTTTGGTATTAGTGTTTTAGCAGGGGATGAAAAGAAGACTATGGAA
GCTATATACGGTGAAGAAGGAATAAAGGCAGGCAATTTGGGAGAGAAACCGAGGAGGTTATTAAAAGAAGCAGCTCAAGA
ACTTATTAGGAGAGGAGCACAGGTTATAATAGCTGGTTGCACCGAGATTTCATTAGTTTTAGGAGAAGAAGATGTTTCCC
TACCTTTAGTAGATCCTCTAACTATCTTGGCTAAGGTAGCAGTAGAATTGGCTTTAGGGATATAA

Upstream 100 bases:

>100_bases
GTTGATAAGCTTAATATCATTTAAGCCTTATCAATAACCGTTTGAACGGATTTCAAAGTAAACACTTTTGACAGGACCAA
ATTAAGGAGGGGGATTTTTT

Downstream 100 bases:

>100_bases
GAGCTGTTGAATTAGTGTTACCTTTAATATGAGTAGAATCCATAGAAACAAACTCACCAGAGATAACGCCCAAATATTTG
AGGATATTAACCTGATTTTT

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MGKKRKIVGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCNPQIPDRTKAILYGGPDPTPELIATAKNLVKAGAD
FIVIPCNTAHYFLDYLKREVDIPIINMIEETARYVRNNYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTME
AIYGEEGIKAGNLGEKPRRLLKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSLPLVDPLTILAKVAVELALGI

Sequences:

>Translated_234_residues
MGKKRKIVGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCNPQIPDRTKAILYGGPDPTPELIATAKNLVKAGAD
FIVIPCNTAHYFLDYLKREVDIPIINMIEETARYVRNNYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTME
AIYGEEGIKAGNLGEKPRRLLKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSLPLVDPLTILAKVAVELALGI
>Mature_233_residues
GKKRKIVGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCNPQIPDRTKAILYGGPDPTPELIATAKNLVKAGADF
IVIPCNTAHYFLDYLKREVDIPIINMIEETARYVRNNYPYAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEA
IYGEEGIKAGNLGEKPRRLLKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSLPLVDPLTILAKVAVELALGI

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=231, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 25612; Mature: 25481

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKRKIVGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCNPQIPDRTKAILYGG
CCCCCEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECC
PDPTPELIATAKNLVKAGADFIVIPCNTAHYFLDYLKREVDIPIINMIEETARYVRNNYP
CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
YAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIYGEEGIKAGNLGEKPRRL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHH
LKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSLPLVDPLTILAKVAVELALGI
HHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKKRKIVGILGGLGPMATVDLFRRIVEFTPAKVDQEHLRIIIDCNPQIPDRTKAILYGG
CCCCEEEEHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCEEEECC
PDPTPELIATAKNLVKAGADFIVIPCNTAHYFLDYLKREVDIPIINMIEETARYVRNNYP
CCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
YAECVGLLATSGTIKSNLYHKAFKKFGISVLAGDEKKTMEAIYGEEGIKAGNLGEKPRRL
HHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHH
LKEAAQELIRRGAQVIIAGCTEISLVLGEEDVSLPLVDPLTILAKVAVELALGI
HHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]