| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is mutS2
Identifier: 20808111
GI number: 20808111
Start: 1633388
End: 1635760
Strand: Reverse
Name: mutS2
Synonym: TTE1685
Alternate gene names: 20808111
Gene position: 1635760-1633388 (Counterclockwise)
Preceding gene: 20808112
Following gene: 20808110
Centisome position: 60.82
GC content: 38.64
Gene sequence:
>2373_bases ATGAAGGGAATGAGGGAAAAAACTTTAAAAAGCCTTGAGTTTGACAAAATAGTTAAGCTAATTGCGAATGAATGCGACTC AGAGCTTGGGAGAGAAAAAGTTTTTGACATAGAGATAAAAAAAGATTTAAAGGCAATAGAATTTGAATTAGACTTGCTCA ATGAGGCAGTGAAATTTATCTATTCCTATGGGGATATATCTTTTTCTTTTCAAGACATAAGAGAGCATGTAAAAAAAGCG CAGATTGATTACATCCTCTACAACAGGGAACTTTTAGGTATTAAAAATTTTCTCAGCCTTGTGGAGGAAGTCAAGGCCCA CTTTAAATCGCTGTATGACAGGGAAGACTTTTTATTGCTTAAAGAATTTGATAAAAGGCTTGTTCCTCTAAAAAGTTTAA AGGAGAAGATTGAGAATACGGTGATTTCTGAAGATGAGATCTCAGATGAAGCCTCTCCGGTTTTGAAAGCAATAAGGAGG CAGAAGGCATCAATAAATGAGAAGATAAAGTCTACTTTAAATTCTATAATTTCTACAAGGCAAAAAGAACTTCAAGAGCC AATAATAACAATGAGACAGGGAAGATATGTCGTGCCAGTAAAACAGGAATACAGGAATGTGTTTAAAGGCATAATACACG ACCAGTCTTCCACAGGGGCTACTTTGTTCATCGAGCCTATCCAAGTAGTAGATTTAAACAATGAATTGAGGGAGTTAGAA TTAAAGGAGCAGAAGGAGATAGAAAGGATACTTTTTGAACTTTCTCAAGAAGTTAAGAAGAATGCTGAAGCTATTTTCAA AGATGTTGAAGTGGTATCTGAACTGGATTTCCTATTTGCAAAAGCCCGTTATTCAATAAAGATAAAAGCTTCAAGGCCTG AGCTAAATACTTCAGGGTATGTAAATCTCAAAAAAGCGCGCCATCCTTTGATAGACCCTGAGAAAGTCGTTCCAATAGAC ATACACATAGGAAGAGAGTTTACTACCTTGGTAATTACAGGTCCTAACACAGGAGGTAAAACTGTCACTTTAAAGACAGT AGGGCTTTTGACTTTGATGGCGATGGCAGGAATAAACATTCCTGCAGAAGAGAAATCCCAGATTTCCATATTCGAAGATG TCTTTGTGGACATAGGCGATGAGCAGAGCATTGAGCAAAGTTTGAGCACCTTTTCTTCTCACATGACAAATATAGTGAGT ATTCTTAAAAAGGTCAATAAGAATTCTTTGGTGCTTTTGGATGAGTTGGGGGCAGGGACTGACCCTCTTGAAGGTTCTGC ACTTGCTATGAGCATCTTGGACTTTCTCCACAGGACAGGATGCAGGACAATAGCCACCACCCATTACAGTGAGCTCAAGC AGTACGCCTTGAAGACCAAGGGCGTGGAAAATGCCAGTGTCGAGTTTGATGTGGAGACCTTACGGCCTACTTACAGGCTT ATCATAGGTATTCCTGGAAGGAGCAATGCTTTTGAGATTTCAAGAAGGCTTGGGCTTTCAGAGGAAATAATTGAAAATGC CAAGAGCTACATGTCTGGTGAGGCCATAAGGTTTGAGGATGTCATTAAAGACGTAGAAGAAAAAAGAAAAGATCTAGAAA ATGCTTATCAGGAAGTAGAAAGGCTAAAAAAAGAAGTGGAAGTCTTAAAAGAGGAATTAGAAAAGGAGAAGAGAAAGCTC GAATCTCAAAAAGATAAAATATTGAAAGAGGCTAAAGAAAAAGCTAGGGAGATAATTAAAGAAGCAAAGCAGACTGCAGA GGAAGTAATAAAGAGGATAAAAGAGGCAGAAGAAAAAGAGAAAAACAAAGACAGGGCGATACAGGAAATAAGGGAGAAGA TCAAGAAAAATCTAGAAGAGTTGGAAGAAGAGGTTTTAAAACCTAAGGAATTTTCTTATGGCAAAATCCCTGATTCTTTA AAAGCTGGACAGACTGTTTATATTGTCCCATTAGACCAAAATGGAATTGTTCTCTCTCCACCGGATGCATCAGGAAATGT TGAAGTGCAGGCGGGAATTTTGAAGATGACAGTTCACATAAGCAATTTGAGAGTCAAAGAAGAGCAGGAACAGGAAGAAG TGAAAAAGGGTTACAGCAGGTTTATCAATGAAAAGGCAAAGTCGATAAGCCCCTCTCTTGATGTCAGAGGTATGACTTTG GACGATGCTCTTTTGGAAGTGGAAAAATACATTGACGATGCGTATCTGGCAGGGCTTAATCAAGTGACTATAATACACGG AAGGGGTACAGGAGTTTTGAGGACGGGAATTGCCAAATTTTTAAGAAATAGTAAGTATGTAAAATCCTTTAGGCTAGGCA GATATGGTGAGGGCGGTGATGGTGTCACCATTGTTGAATTGCACAGCAGATAG
Upstream 100 bases:
>100_bases AAATTTTACAAATGCATATAAAAGCATTAGAAGGAGAAAAAATTGAGGTTCCAGAGGGAAACTATACCAAAGGACATTTT TACAGAGGAGTTTTGTAGTC
Downstream 100 bases:
>100_bases GAGGGGACTTATGTACCTTGTGAGTGCCTGTTTGGCAGGGATAAACTGCAAATATGACGGCGGCAACAATGAAAGAGAAG AGATAAAAAATTTAGTAAGG
Product: recombination and DNA strand exchange inhibitor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MKGMREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFIYSYGDISFSFQDIREHVKKA QIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDREDFLLLKEFDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRR QKASINEKIKSTLNSIISTRQKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEPIQVVDLNNELRELE LKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYVNLKKARHPLIDPEKVVPID IHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVS ILKKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRL IIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKL ESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIPDSL KAGQTVYIVPLDQNGIVLSPPDASGNVEVQAGILKMTVHISNLRVKEEQEQEEVKKGYSRFINEKAKSISPSLDVRGMTL DDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGDGVTIVELHSR
Sequences:
>Translated_790_residues MKGMREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFIYSYGDISFSFQDIREHVKKA QIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDREDFLLLKEFDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRR QKASINEKIKSTLNSIISTRQKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEPIQVVDLNNELRELE LKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYVNLKKARHPLIDPEKVVPID IHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVS ILKKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRL IIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKL ESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIPDSL KAGQTVYIVPLDQNGIVLSPPDASGNVEVQAGILKMTVHISNLRVKEEQEQEEVKKGYSRFINEKAKSISPSLDVRGMTL DDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGDGVTIVELHSR >Mature_790_residues MKGMREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFIYSYGDISFSFQDIREHVKKA QIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDREDFLLLKEFDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRR QKASINEKIKSTLNSIISTRQKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEPIQVVDLNNELRELE LKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYVNLKKARHPLIDPEKVVPID IHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVS ILKKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRL IIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKL ESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIPDSL KAGQTVYIVPLDQNGIVLSPPDASGNVEVQAGILKMTVHISNLRVKEEQEQEEVKKGYSRFINEKAKSISPSLDVRGMTL DDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGDGVTIVELHSR
Specific function: This Protein Is Involved In The Repair Of Mismatches In DNA. It Is Possible That It Carries Out The Mismatch Recognition Step. This Protein Has A Weak Atpase Activity. [C]
COG id: COG1193
COG function: function code L; Mismatch repair ATPase (MutS family)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Smr domain
Homologues:
Organism=Homo sapiens, GI4504191, Length=299, Percent_Identity=31.438127090301, Blast_Score=124, Evalue=5e-28, Organism=Homo sapiens, GI26638666, Length=327, Percent_Identity=29.6636085626911, Blast_Score=114, Evalue=5e-25, Organism=Homo sapiens, GI4505253, Length=327, Percent_Identity=29.6636085626911, Blast_Score=114, Evalue=5e-25, Organism=Homo sapiens, GI284813531, Length=486, Percent_Identity=26.9547325102881, Blast_Score=112, Evalue=2e-24, Organism=Homo sapiens, GI36949366, Length=233, Percent_Identity=31.7596566523605, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI26638664, Length=330, Percent_Identity=30.6060606060606, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI4557761, Length=343, Percent_Identity=27.1137026239067, Blast_Score=109, Evalue=1e-23, Organism=Homo sapiens, GI262231786, Length=241, Percent_Identity=33.195020746888, Blast_Score=100, Evalue=5e-21, Organism=Escherichia coli, GI1789089, Length=278, Percent_Identity=28.4172661870504, Blast_Score=109, Evalue=8e-25, Organism=Caenorhabditis elegans, GI17508445, Length=330, Percent_Identity=26.3636363636364, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17534743, Length=294, Percent_Identity=27.891156462585, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17508447, Length=265, Percent_Identity=26.7924528301887, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17539736, Length=292, Percent_Identity=24.3150684931507, Blast_Score=82, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324482, Length=416, Percent_Identity=27.6442307692308, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6319935, Length=267, Percent_Identity=32.5842696629214, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320302, Length=308, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321912, Length=304, Percent_Identity=25.3289473684211, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6321109, Length=219, Percent_Identity=27.3972602739726, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6320047, Length=219, Percent_Identity=29.6803652968037, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664545, Length=279, Percent_Identity=30.1075268817204, Blast_Score=124, Evalue=4e-28, Organism=Drosophila melanogaster, GI24584320, Length=249, Percent_Identity=29.718875502008, Blast_Score=108, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTS2_THETN (Q8R9D0)
Other databases:
- EMBL: AE008691 - RefSeq: NP_623282.1 - ProteinModelPortal: Q8R9D0 - GeneID: 996365 - GenomeReviews: AE008691_GR - KEGG: tte:TTE1685 - NMPDR: fig|273068.3.peg.1666 - HOGENOM: HBG486560 - OMA: PGLVHDQ - ProtClustDB: PRK00409 - BioCyc: TTEN273068:TTE1685-MONOMER - HAMAP: MF_00092 - InterPro: IPR005747 - InterPro: IPR000432 - InterPro: IPR007696 - InterPro: IPR002625 - PANTHER: PTHR11361 - PIRSF: PIRSF005814 - SMART: SM00534 - SMART: SM00533 - SMART: SM00463 - TIGRFAMs: TIGR01069
Pfam domain/function: PF00488 MutS_V; PF01713 Smr; SSF48334 DNA_repair_MutS_domIII
EC number: NA
Molecular weight: Translated: 90016; Mature: 90016
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS00486 DNA_MISMATCH_REPAIR_2; PS50828 SMR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGMREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFI CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH YSYGDISFSFQDIREHVKKAQIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDREDFLLL HHHCCCEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KEFDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRRQKASINEKIKSTLNSIISTR HHHHHHCCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEPIQVVDLNNELRELE HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCHHHHHH LKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCC VNLKKARHPLIDPEKVVPIDIHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINI EEEHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCC PAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSILKKVNKNSLVLLDELGAGT CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC DPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCEEEE IIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKDVEEKRKDLENAYQEVE EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH RLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIPDSLKAGQTVYIVPLDQNGIVLSP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECC PDASGNVEVQAGILKMTVHISNLRVKEEQEQEEVKKGYSRFINEKAKSISPSLDVRGMTL CCCCCCEEEEECEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH DDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGD HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCC GVTIVELHSR CEEEEEECCC >Mature Secondary Structure MKGMREKTLKSLEFDKIVKLIANECDSELGREKVFDIEIKKDLKAIEFELDLLNEAVKFI CCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH YSYGDISFSFQDIREHVKKAQIDYILYNRELLGIKNFLSLVEEVKAHFKSLYDREDFLLL HHHCCCEEEHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH KEFDKRLVPLKSLKEKIENTVISEDEISDEASPVLKAIRRQKASINEKIKSTLNSIISTR HHHHHHCCCHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKELQEPIITMRQGRYVVPVKQEYRNVFKGIIHDQSSTGATLFIEPIQVVDLNNELRELE HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEECCCHHHHHH LKEQKEIERILFELSQEVKKNAEAIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCCC VNLKKARHPLIDPEKVVPIDIHIGREFTTLVITGPNTGGKTVTLKTVGLLTLMAMAGINI EEEHHCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCC PAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSILKKVNKNSLVLLDELGAGT CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCC DPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGVENASVEFDVETLRPTYRL CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCEEEE IIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFEDVIKDVEEKRKDLENAYQEVE EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHH RLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKAREIIKEAKQTAEEVIKRIKEAEEKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYGKIPDSLKAGQTVYIVPLDQNGIVLSP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEECC PDASGNVEVQAGILKMTVHISNLRVKEEQEQEEVKKGYSRFINEKAKSISPSLDVRGMTL CCCCCCEEEEECEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH DDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSFRLGRYGEGGD HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCC GVTIVELHSR CEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336