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The map label for this gene is rsgA

Identifier: 20807942

GI number: 20807942

Start: 1464246

End: 1465133

Strand: Reverse

Name: rsgA

Synonym: TTE1499

Alternate gene names: 20807942

Gene position: 1465133-1464246 (Counterclockwise)

Preceding gene: 20807943

Following gene: 20807941

Centisome position: 54.48

GC content: 38.51

Gene sequence:

>888_bases
TTGGAGAGGATACAGGGAAGGATTGTAAGAGGGATTGCTGGATTTTATTATGTTGCTACCGAGCGCGGCATTATAGAATG
CCGTGCTCGTGGAAAATTTAGAAAAGACAATATAATTCCATTAGTAGGAGATATTGCAGAGGTCCAGCTGGTGAATGAGA
AGGAAGGCTATATACTGGAAATTTTACCCAGGAAAAATCAACTGGTAAGGCCGCCTGTTGCCAATGTAGACCAGGCCATA
ATAGTCTTTGCCATATCTAAGCCAGAGATAAACAGAGTTCTTTTGGACAAGATGATTGTGGTTGCTGAAATTAACAAGAT
AGAGCCTGTGGTCTGCATAAACAAAGTAGATATGGAAAAAAGAGAGGAAGTAGAAAATTTGATCAATGTTTACAGAAAAA
TAGGCTATAAAGCTGTCGGTACTTCTGCAGTAACTGGAGAAGGCATGGAAGAATTGAAGAGCTATTTAAAAGATAAAATT
TCTTTTTTTGCTGGTCCTTCCGGGGTAGGTAAGTCTTCTCTCATAAATCTCATACAGTCCAACATAAGGTTGAAAACCGG
GGAATTGAGTGAAAAGCTCGGGAGAGGAAGGCACACCACAAGAAGTGTAGAATTTTTACCCCTTGATTTTGGAGGATATG
TTTTAGATACTCCTGGTTTTACGGCTTTGGAAATTGACATTCCCAAAGAAGAGTTGAGGAATTATTTTAGAGAATTTATA
GAATTTCAAGAAAATTGCAGGTTTAATTCCTGTCTCCATGTGAATGAACCTGATTGTGCAGTTACTGAAGCAGTGGATGA
GGGCATTATAGACAGGCAAAGGTATATAAGTTATTTGACTCTTTTAAGGGAGGTAAAAGAGAAGGAGAAGAGGAGGTATA
AAAATTGA

Upstream 100 bases:

>100_bases
TAGCCCTTTGACTGTGCCTGTTACGGCTCATAAAGGGAAAGCTGTCATTGAAGTGGATATTGATGGACAAGTATACAGCA
GAGTGGAGGCGAGATTTTAA

Downstream 100 bases:

>100_bases
AGATCGCACCTTCTATACTTTCAGCCGATTTTGCAAACCTTTTACAGGATGTAAAGGAAATAGAAGAAGATGCTGACCTT
TTGCACATAGATGTGATGGA

Product: GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MERIQGRIVRGIAGFYYVATERGIIECRARGKFRKDNIIPLVGDIAEVQLVNEKEGYILEILPRKNQLVRPPVANVDQAI
IVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEKREEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKI
SFFAGPSGVGKSSLINLIQSNIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEIDIPKEELRNYFREFI
EFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRRYKN

Sequences:

>Translated_295_residues
MERIQGRIVRGIAGFYYVATERGIIECRARGKFRKDNIIPLVGDIAEVQLVNEKEGYILEILPRKNQLVRPPVANVDQAI
IVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEKREEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKI
SFFAGPSGVGKSSLINLIQSNIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEIDIPKEELRNYFREFI
EFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRRYKN
>Mature_295_residues
MERIQGRIVRGIAGFYYVATERGIIECRARGKFRKDNIIPLVGDIAEVQLVNEKEGYILEILPRKNQLVRPPVANVDQAI
IVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEKREEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKI
SFFAGPSGVGKSSLINLIQSNIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEIDIPKEELRNYFREFI
EFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRRYKN

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=229, Percent_Identity=35.3711790393013, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_THETN (Q8R9T7)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623113.1
- ProteinModelPortal:   Q8R9T7
- SMR:   Q8R9T7
- GeneID:   997916
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1499
- NMPDR:   fig|273068.3.peg.1460
- HOGENOM:   HBG652450
- OMA:   TRARGVF
- BioCyc:   TTEN273068:TTE1499-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00157

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 33704; Mature: 33704

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIQGRIVRGIAGFYYVATERGIIECRARGKFRKDNIIPLVGDIAEVQLVNEKEGYILE
CCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCEEE
ILPRKNQLVRPPVANVDQAIIVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEK
EECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH
REEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKISFFAGPSGVGKSSLINLIQS
HHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
NIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEIDIPKEELRNYFREFI
CCEEECCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCHHHHHHHHHHHH
EFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRRYKN
HHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERIQGRIVRGIAGFYYVATERGIIECRARGKFRKDNIIPLVGDIAEVQLVNEKEGYILE
CCCHHHHHHHHHHHHEEEECCCCEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCEEE
ILPRKNQLVRPPVANVDQAIIVFAISKPEINRVLLDKMIVVAEINKIEPVVCINKVDMEK
EECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHH
REEVENLINVYRKIGYKAVGTSAVTGEGMEELKSYLKDKISFFAGPSGVGKSSLINLIQS
HHHHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
NIRLKTGELSEKLGRGRHTTRSVEFLPLDFGGYVLDTPGFTALEIDIPKEELRNYFREFI
CCEEECCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCHHHHHHHHHHHH
EFQENCRFNSCLHVNEPDCAVTEAVDEGIIDRQRYISYLTLLREVKEKEKRRYKN
HHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336