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The map label for this gene is yraN [C]

Identifier: 20807899

GI number: 20807899

Start: 1427053

End: 1427421

Strand: Direct

Name: yraN [C]

Synonym: TTE1452

Alternate gene names: 20807899

Gene position: 1427053-1427421 (Clockwise)

Preceding gene: 20807898

Following gene: 20807927

Centisome position: 53.06

GC content: 33.88

Gene sequence:

>369_bases
ATGAAAAAAGTGAACAAAAAAACAGTAGGCAGCGTAGGTGAAAAAATAGCTGCCCAGTATCTCTCTAAAAAGGGGTATAA
AATTTTAGAAAAAAACTTCAAGTGCAAAATTGGAGAAATAGACTTAATAGCCCTTTACAAAAACCAAATAGTCTTTGTAG
AAGTAAAAACGCGAACTTCTGTGAATTTTGGACTCCCCAGCGAAGCCGTAGACTTTCACAAGCAGCAGAAAATTGTAAAA
ATAGCTCAAGTTTACATAGCTAGCTCAAACTTCAAACAATACCAACCGCGATTTGACATAATTGAAGTGTACCTCAATCC
CGAAAAATTGACTTTAGAAAAAGTAAATCACATTTTAAATGCCTTTTAA

Upstream 100 bases:

>100_bases
AAAACAAAGGATATGGCACAAAGGAACACATCGAAGCTTTAAAAAAGTACGGGCCATGTCCTATTCACAGGCGGACTTAT
GTAGAAAAAATTCTGAAAGG

Downstream 100 bases:

>100_bases
TCTCTTAGTATAAGCCCCATCTTTTCCTTTACTTCTTTCAAGGTCTCAACTGCTACAGCTTCTGCCCTTTCAGCCCCTTC
TTTTAATACCCTTAAAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKKVNKKTVGSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTSVNFGLPSEAVDFHKQQKIVK
IAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILNAF

Sequences:

>Translated_122_residues
MKKVNKKTVGSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTSVNFGLPSEAVDFHKQQKIVK
IAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILNAF
>Mature_122_residues
MKKVNKKTVGSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTSVNFGLPSEAVDFHKQQKIVK
IAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILNAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1452_THETN (Q8R5S3)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623070.1
- ProteinModelPortal:   Q8R5S3
- GeneID:   996157
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1452
- NMPDR:   fig|273068.3.peg.1417
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- ProtClustDB:   PRK12497
- BioCyc:   TTEN273068:TTE1452-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14039; Mature: 14039

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNKKTVGSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCEEEEEEECCCEEEEEEECCCE
VNFGLPSEAVDFHKQQKIVKIAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILN
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
AF
CC
>Mature Secondary Structure
MKKVNKKTVGSVGEKIAAQYLSKKGYKILEKNFKCKIGEIDLIALYKNQIVFVEVKTRTS
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEECCEEEEEEECCCEEEEEEECCCE
VNFGLPSEAVDFHKQQKIVKIAQVYIASSNFKQYQPRFDIIEVYLNPEKLTLEKVNHILN
ECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHH
AF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336