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The map label for this gene is HslV [H]

Identifier: 20807895

GI number: 20807895

Start: 1422397

End: 1422927

Strand: Reverse

Name: HslV [H]

Synonym: TTE1448

Alternate gene names: 20807895

Gene position: 1422927-1422397 (Counterclockwise)

Preceding gene: 20807896

Following gene: 20807894

Centisome position: 52.91

GC content: 39.92

Gene sequence:

>531_bases
ATGTTTAGAGGCACTACTATAGTTGCAGTCAGAAGAGGAGATAGGGTATCTGTGGCGGGAGACGGACAGGTCACTTTTGG
AGACAGCACTATATTAAAACACGGAGCTAAAAAAATAAGGAGGCTTTACAACGGAGAAGTCATAGTAGGTTTTGCAGGAT
CTGTAGCAGATGCCATGACCTTATCTCAAAAATTTGAAGAGAAATTAGAACAATATGGCGGCAATTTAAAGAGGGCAGCT
GTTGAGTTGGCACAGGAGTGGAGAAAAGACAAGATTTTAAGAAAACTGGAAGCGCTTTTGATTGCTGCAGATAAAAAAGA
TACTTTGCTGATATCTGGAACAGGGGAAGTTATAGAACCGGATGAAGATGTCATTGGAATAGGATCCGGAGGGAATTACG
CTATGGCTGCTGCTTTGGCTTTAAGGTATAACACAGATTTAGATACAGAAGAAATTGCGAGAAAAGCTTTGGAAATAGCT
TCAAAGATATGCGTGTATACAAATAACAATATTACAGTAGAGACACTCTAG

Upstream 100 bases:

>100_bases
GATATCAGAAAGAAACTAATTAAATGAATTTATCAAAAATTTTGAATTAATCTTGAAGCTTTTCACAAAATGTGTTATAA
ATGTTTAAAGGGGTGTAATT

Downstream 100 bases:

>100_bases
GGGGTGAGGAATGTGAAAAATTACACGCCTAAAGAAATTGTAGCAGAACTTGACAAATACATAGTCGGACAAAAGGAAGC
AAAAAAGTCTGTGGCAGTTG

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTLSQKFEEKLEQYGGNLKRAA
VELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPDEDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIA
SKICVYTNNNITVETL

Sequences:

>Translated_176_residues
MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTLSQKFEEKLEQYGGNLKRAA
VELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPDEDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIA
SKICVYTNNNITVETL
>Mature_176_residues
MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMTLSQKFEEKLEQYGGNLKRAA
VELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEPDEDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIA
SKICVYTNNNITVETL

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=58.1395348837209, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.-

Molecular weight: Translated: 19120; Mature: 19120

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMT
CCCCEEEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
LSQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEECC
DEDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIASKICVYTNNNITVETL
CCCEEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEC
>Mature Secondary Structure
MFRGTTIVAVRRGDRVSVAGDGQVTFGDSTILKHGAKKIRRLYNGEVIVGFAGSVADAMT
CCCCEEEEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHH
LSQKFEEKLEQYGGNLKRAAVELAQEWRKDKILRKLEALLIAADKKDTLLISGTGEVIEP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCEECC
DEDVIGIGSGGNYAMAAALALRYNTDLDTEEIARKALEIASKICVYTNNNITVETL
CCCEEEECCCCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA