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The map label for this gene is FlgC [H]

Identifier: 20807891

GI number: 20807891

Start: 1419161

End: 1419601

Strand: Reverse

Name: FlgC [H]

Synonym: TTE1444

Alternate gene names: 20807891

Gene position: 1419601-1419161 (Counterclockwise)

Preceding gene: 20807892

Following gene: 20807890

Centisome position: 52.78

GC content: 41.04

Gene sequence:

>441_bases
ATGAATTTGTTTAGTTCAATGGATATAAGCGCAACCGGGTTGACTGCAGAGAGAGTCAGAATGGATGTGGTATCGCAAAA
TATTGCCAATGCCAACACTACAAGGACAGTTCAAGGCGGTCCTTACAGGAGAAAGCTGGTGGTTTTTAAGGAAATTCAAC
CAGACAGCTTTCAGAGCATTCTCGAAAAAGTAAAAGGAAAATACACGGGTAAGGGAGTAGAAGTGGTACAGATAATAGAA
GATGAACAAACTCCTTTAAGGCGAGTCTATGACCCGGGTCATCCAGATGCGGACCAGCAGGGTTATGTTTCTTACCCTAA
TGTAAATATTGTGGCTGAGATGGTAGATATGATTTCTGCAACTCGAGCCTATGAAGCCAATGTAACCGCTTTTAATGCTG
CCAAATCTATGTTTCAAAAGTCTTTAGAAATAGGAAAATGA

Upstream 100 bases:

>100_bases
GCTTGCTAAAAATCAGCTCTACTATTACGCTCTTGTTCAAAGAGTCAGCGGAGAACTCAATTCCATCATGACAGCCGTAA
AAGACGGGAGGTAATGTTGA

Downstream 100 bases:

>100_bases
AGGGGTAGAGGAAAATGATAAATCAGATTACCGGTATACAGCCTGTTACTCTCACAGAGACCAATAATATTGCACCCTCA
ACCAGCAAGATAAACAGTTT

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSILEKVKGKYTGKGVEVVQIIE
DEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISATRAYEANVTAFNAAKSMFQKSLEIGK

Sequences:

>Translated_146_residues
MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSILEKVKGKYTGKGVEVVQIIE
DEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISATRAYEANVTAFNAAKSMFQKSLEIGK
>Mature_146_residues
MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSILEKVKGKYTGKGVEVVQIIE
DEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISATRAYEANVTAFNAAKSMFQKSLEIGK

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=146, Percent_Identity=42.4657534246575, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 16223; Mature: 16223

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCHHHHHH
LEKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISA
HHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
TRAYEANVTAFNAAKSMFQKSLEIGK
HHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLFSSMDISATGLTAERVRMDVVSQNIANANTTRTVQGGPYRRKLVVFKEIQPDSFQSI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEECCCCHHHHHH
LEKVKGKYTGKGVEVVQIIEDEQTPLRRVYDPGHPDADQQGYVSYPNVNIVAEMVDMISA
HHHHCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHH
TRAYEANVTAFNAAKSMFQKSLEIGK
HHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]