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The map label for this gene is rimP

Identifier: 20807844

GI number: 20807844

Start: 1379218

End: 1379673

Strand: Reverse

Name: rimP

Synonym: TTE1397

Alternate gene names: 20807844

Gene position: 1379673-1379218 (Counterclockwise)

Preceding gene: 20807845

Following gene: 20807843

Centisome position: 51.3

GC content: 39.91

Gene sequence:

>456_bases
ATGTCTAGGATTGAGGAAATTACAAAAGAATTGGTGATGCCAATATTGGAAGAGAATAATTTTGAACTGGTGGATGTGGA
GTATAAAAAAGAAGGCAAGCACTGGTATTTGAGGGTGTATATAGACAAAGAAGGCGGGATAACGCTTGATGACTGTCAGC
TGGTGAGCGAGTACTTAAGCGATAGATTGGATGAGGTAGACCCGATAGATCACAGCTATATTTTGGAAGTATCCTCGCCA
GGGCTTGACAGGCCCTTAAAGACTCCTCGAGATTTTAAGAGAAACCTCGGGAAAGAAGTTGAAGTATCTCTTTACCAGCC
CATTGACAAGAGAAAAAAATTTACAGGAGAGCTCCTTGAGTTCACAGGAGATAAAATAATCCTTCTATGTGAAGGAGAGA
AGAGGGAGTTTGAAATGAAGAATGTAAGGCTTGTTAAACCTGTGATAAAGTTTTAA

Upstream 100 bases:

>100_bases
TTACCAAAAGGTGTATGGTATAATTAGTATGGCAACCTAGAGGACTTTAAAAAGAGTGGGAGTTTCCCACTCTTTAGTTT
ATATTTAAGGAGGATCGGAG

Downstream 100 bases:

>100_bases
AATTAAGGAGGGAGAGTAAGCGCAATGAATGCAGAATTTATTGAGGCATTGAATTCAATATGCGAAGAAAAAGGAATACC
TAAAGAGACTATGTTTGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKEGGITLDDCQLVSEYLSDRLDEVDPIDHSYILEVSSP
GLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLEFTGDKIILLCEGEKREFEMKNVRLVKPVIKF

Sequences:

>Translated_151_residues
MSRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKEGGITLDDCQLVSEYLSDRLDEVDPIDHSYILEVSSP
GLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLEFTGDKIILLCEGEKREFEMKNVRLVKPVIKF
>Mature_150_residues
SRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKEGGITLDDCQLVSEYLSDRLDEVDPIDHSYILEVSSPG
LDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLEFTGDKIILLCEGEKREFEMKNVRLVKPVIKF

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=39.7350993377483, Blast_Score=108, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_THETN (Q8RA33)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623015.1
- ProteinModelPortal:   Q8RA33
- SMR:   Q8RA33
- GeneID:   997610
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE1397
- NMPDR:   fig|273068.3.peg.1362
- HOGENOM:   HBG668072
- OMA:   PYEKIAN
- ProtClustDB:   PRK00092
- BioCyc:   TTEN273068:TTE1397-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17796; Mature: 17665

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKEGGITLDDCQLVSEYLS
CCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEHHHHHHHHHHHH
DRLDEVDPIDHSYILEVSSPGLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLE
HHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
FTGDKIILLCEGEKREFEMKNVRLVKPVIKF
HCCCEEEEEECCCCCCCHHCCEEEHHHHHCC
>Mature Secondary Structure 
SRIEEITKELVMPILEENNFELVDVEYKKEGKHWYLRVYIDKEGGITLDDCQLVSEYLS
CHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCCEEHHHHHHHHHHHH
DRLDEVDPIDHSYILEVSSPGLDRPLKTPRDFKRNLGKEVEVSLYQPIDKRKKFTGELLE
HHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
FTGDKIILLCEGEKREFEMKNVRLVKPVIKF
HCCCEEEEEECCCCCCCHHCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336