Click here to switch to the map view.

The map label for this gene is AccB [H]

Identifier: 20807677

GI number: 20807677

Start: 1223473

End: 1223880

Strand: Direct

Name: AccB [H]

Synonym: TTE1222

Alternate gene names: 20807677

Gene position: 1223473-1223880 (Clockwise)

Preceding gene: 20807676

Following gene: 20807678

Centisome position: 45.49

GC content: 34.56

Gene sequence:

>408_bases
ATGAAAAAGTTTAAGGTTACTGTTAACGGGAAAATTTATAATGTAGAAATAGAAGAAATACAGGAAAATAAAACAACAAA
AGAGGTGAGTGAAGAAAAATCTCCACAGGTGGTGTTGTCTGAAAAAGTTGAGCAAGAAATTAAAAAAGAAGAAATTAAAC
CTAAAGAAGAGAAAGAAGTCAGAAAACCTGAGGGAGAAAAGACTATAACGGCTCCTATGCCTGGAACTATTGTTGACGTC
AGAGTAAAAGAAGGAGATAAAGTAAAAAGAGGGGATGTAATTGTTATTTTGGAGGCAATGAAGATGGAAAATGAAATCAT
GGCACCCGAAAACGGAACGATAGTAAGTGTAAATGTTGCTAAAGGCGATACAGTGAATAGAGGAGATATTATCGTAACCA
TGGAGTAA

Upstream 100 bases:

>100_bases
TAAAAACTATAAGGAGAATTGCTGATACTGTTCCTATATGGAATAAAATAGGGCGGTTAGAACAGATAACGAGAATGCCA
GAAAAGGGGAGGAAAAGAAT

Downstream 100 bases:

>100_bases
AAATATCATGGGGCAAATAGCGGAGAGGTTAAGTTAAAATGGGGGATCTTTTAGTAGTATTTCTATCCTTTCTTATAATT
ATTTTACTTGTAATGCTTAA

Product: biotin carboxyl carrier protein

Products: NA

Alternate protein names: Biotin carrier [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MKKFKVTVNGKIYNVEIEEIQENKTTKEVSEEKSPQVVLSEKVEQEIKKEEIKPKEEKEVRKPEGEKTITAPMPGTIVDV
RVKEGDKVKRGDVIVILEAMKMENEIMAPENGTIVSVNVAKGDTVNRGDIIVTME

Sequences:

>Translated_135_residues
MKKFKVTVNGKIYNVEIEEIQENKTTKEVSEEKSPQVVLSEKVEQEIKKEEIKPKEEKEVRKPEGEKTITAPMPGTIVDV
RVKEGDKVKRGDVIVILEAMKMENEIMAPENGTIVSVNVAKGDTVNRGDIIVTME
>Mature_135_residues
MKKFKVTVNGKIYNVEIEEIQENKTTKEVSEEKSPQVVLSEKVEQEIKKEEIKPKEEKEVRKPEGEKTITAPMPGTIVDV
RVKEGDKVKRGDVIVILEAMKMENEIMAPENGTIVSVNVAKGDTVNRGDIIVTME

Specific function: Biotin carrier subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

Organism=Homo sapiens, GI65506442, Length=67, Percent_Identity=47.7611940298507, Blast_Score=69, Evalue=9e-13,
Organism=Homo sapiens, GI189095269, Length=67, Percent_Identity=47.7611940298507, Blast_Score=69, Evalue=9e-13,
Organism=Homo sapiens, GI106049528, Length=94, Percent_Identity=37.2340425531915, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI106049295, Length=94, Percent_Identity=37.2340425531915, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI106049292, Length=94, Percent_Identity=37.2340425531915, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17567343, Length=67, Percent_Identity=44.7761194029851, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24651757, Length=117, Percent_Identity=36.7521367521368, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24651759, Length=117, Percent_Identity=36.7521367521368, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24652212, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652210, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652214, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI19921944, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652216, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363050, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652224, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652222, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652220, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24652218, Length=110, Percent_Identity=35.4545454545455, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 15195; Mature: 15195

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFKVTVNGKIYNVEIEEIQENKTTKEVSEEKSPQVVLSEKVEQEIKKEEIKPKEEKEV
CCEEEEEECCEEEEEEHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHH
RKPEGEKTITAPMPGTIVDVRVKEGDKVKRGDVIVILEAMKMENEIMAPENGTIVSVNVA
CCCCCCEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCEEECCCCCCEEEEEEC
KGDTVNRGDIIVTME
CCCCCCCCEEEEEEC
>Mature Secondary Structure
MKKFKVTVNGKIYNVEIEEIQENKTTKEVSEEKSPQVVLSEKVEQEIKKEEIKPKEEKEV
CCEEEEEECCEEEEEEHHHHHCCCCHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCHHHH
RKPEGEKTITAPMPGTIVDVRVKEGDKVKRGDVIVILEAMKMENEIMAPENGTIVSVNVA
CCCCCCEEEECCCCCEEEEEEECCCCCEECCCEEEEEEEECCCCEEECCCCCCEEEEEEC
KGDTVNRGDIIVTME
CCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]