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The map label for this gene is OadB2 [H]

Identifier: 20807670

GI number: 20807670

Start: 1217417

End: 1218538

Strand: Direct

Name: OadB2 [H]

Synonym: TTE1215

Alternate gene names: 20807670

Gene position: 1217417-1218538 (Clockwise)

Preceding gene: 20807669

Following gene: 20807671

Centisome position: 45.27

GC content: 36.72

Gene sequence:

>1122_bases
ATGGAAGCTTTCAGGATTTTTATAGAGGGTATCTCAAATTTTACACTAGGACATTTGATAATGCTAGCAATTGGTGGAAT
TTTAATATATCTCGCCATAAAAAAGGAATACGAACCTATGCTTTTGCTCCCTATAGGATTTGGCATAATTCTTACTAATA
TTCCACTTTCTGCTGCAATAGGAAAAAATGGTTTTCTAACCCTTTTATATAATGCAGGTATCAATACAGAACTTTTTCCG
ATCCTAATTTTCATTGCTGTAGGAGCAATGGTGGATTTTACACCACTTTTTCAACAGCCTTTTATGATATTTTTTGGAGC
TGCTGCACAAGTAGGAATCTTCTTGACAATGATAGTAGCATATTTAATGGGATTTGATATTGGAGAAGCTGCTTCTATAG
GGATAATAGGTGCAGCAGATGGTCCTACTTCAATATATGTTTCGACATTGTTTGCTCCTCATTTGCTAGGACCTATTTCA
GTTGCAGCCTATTCCTATATGGCTTTAGTTCCAATAATTCAGCCCCCAATAATTCGAATGCTTACCACAAAGGAAGAACG
AAGAATAAGGATGGAATTAGAGCTGAAAGAGGTTCCAAAAGTTGTTCGAATAATTTTCCCAATAGCAGTAACACTTATCA
CTGGAATTTTGATACCTCAGAGTGTGCCACTCATTGGTTCTCTTATGTTTGGAAATTTAATAAAAGAAAGCGGTGTGGTT
GAGAGACTTTCTAAAGCTGCACAGAACGAACTAGCAAATATTACTACAATTTTACTTGGCATTACTATTGGTGCCACGAT
GACACCAGATAGATTTTTAAACCCTGCTACGCTATTGATTTTCGGAATGGGTCTTTTAGCTTTTATATTTGACACTGCTG
GTGGTGTTTTGTTTGCGAAGTTTTTAAATTTATTTTTGAAAAGAAAGGTTAACCCTATGATAGGTGCTGCAGGAATATCG
GCATTTCCTATGTCTGCTCGTGTTATTCAAAAGATGGCTCAGCAAGAGGATTTTACAAACTTCGTATTGATGCAATCGGT
GGCAGCCAATGTTTCTGGACAGATAGGATCGGTTGTGGCTGGAGGAATTTTGATAGGCCTTGTATCATCTTTATTCATGT
AA

Upstream 100 bases:

>100_bases
ATAAATTTTCTCCAATCAAGGCTGCCTCCTCTCAGAATCTTTCATGAGGGGAGGCAGCTAATTAAGGTCTTGAAATAACC
ATAAAAAGGAGAGAGCAGAA

Downstream 100 bases:

>100_bases
TCACCTAGTTTACAAAAAGAGGTGAAGCGCGATGATAAATATTTACACAGTGCTTAAAATTGCATTAGTAGGTATTACCA
TGACTTTTACAATGCTTATA

Product: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Products: NA

Alternate protein names: Carboxylyase [H]

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MEAFRIFIEGISNFTLGHLIMLAIGGILIYLAIKKEYEPMLLLPIGFGIILTNIPLSAAIGKNGFLTLLYNAGINTELFP
ILIFIAVGAMVDFTPLFQQPFMIFFGAAAQVGIFLTMIVAYLMGFDIGEAASIGIIGAADGPTSIYVSTLFAPHLLGPIS
VAAYSYMALVPIIQPPIIRMLTTKEERRIRMELELKEVPKVVRIIFPIAVTLITGILIPQSVPLIGSLMFGNLIKESGVV
ERLSKAAQNELANITTILLGITIGATMTPDRFLNPATLLIFGMGLLAFIFDTAGGVLFAKFLNLFLKRKVNPMIGAAGIS
AFPMSARVIQKMAQQEDFTNFVLMQSVAANVSGQIGSVVAGGILIGLVSSLFM

Sequences:

>Translated_373_residues
MEAFRIFIEGISNFTLGHLIMLAIGGILIYLAIKKEYEPMLLLPIGFGIILTNIPLSAAIGKNGFLTLLYNAGINTELFP
ILIFIAVGAMVDFTPLFQQPFMIFFGAAAQVGIFLTMIVAYLMGFDIGEAASIGIIGAADGPTSIYVSTLFAPHLLGPIS
VAAYSYMALVPIIQPPIIRMLTTKEERRIRMELELKEVPKVVRIIFPIAVTLITGILIPQSVPLIGSLMFGNLIKESGVV
ERLSKAAQNELANITTILLGITIGATMTPDRFLNPATLLIFGMGLLAFIFDTAGGVLFAKFLNLFLKRKVNPMIGAAGIS
AFPMSARVIQKMAQQEDFTNFVLMQSVAANVSGQIGSVVAGGILIGLVSSLFM
>Mature_373_residues
MEAFRIFIEGISNFTLGHLIMLAIGGILIYLAIKKEYEPMLLLPIGFGIILTNIPLSAAIGKNGFLTLLYNAGINTELFP
ILIFIAVGAMVDFTPLFQQPFMIFFGAAAQVGIFLTMIVAYLMGFDIGEAASIGIIGAADGPTSIYVSTLFAPHLLGPIS
VAAYSYMALVPIIQPPIIRMLTTKEERRIRMELELKEVPKVVRIIFPIAVTLITGILIPQSVPLIGSLMFGNLIKESGVV
ERLSKAAQNELANITTILLGITIGATMTPDRFLNPATLLIFGMGLLAFIFDTAGGVLFAKFLNLFLKRKVNPMIGAAGIS
AFPMSARVIQKMAQQEDFTNFVLMQSVAANVSGQIGSVVAGGILIGLVSSLFM

Specific function: Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD) [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.70 [H]

Molecular weight: Translated: 40066; Mature: 40066

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAFRIFIEGISNFTLGHLIMLAIGGILIYLAIKKEYEPMLLLPIGFGIILTNIPLSAAI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHC
GKNGFLTLLYNAGINTELFPILIFIAVGAMVDFTPLFQQPFMIFFGAAAQVGIFLTMIVA
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
YLMGFDIGEAASIGIIGAADGPTSIYVSTLFAPHLLGPISVAAYSYMALVPIIQPPIIRM
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHH
LTTKEERRIRMELELKEVPKVVRIIFPIAVTLITGILIPQSVPLIGSLMFGNLIKESGVV
HCCCHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERLSKAAQNELANITTILLGITIGATMTPDRFLNPATLLIFGMGLLAFIFDTAGGVLFAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH
FLNLFLKRKVNPMIGAAGISAFPMSARVIQKMAQQEDFTNFVLMQSVAANVSGQIGSVVA
HHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGILIGLVSSLFM
HHHHHHHHHHHCC
>Mature Secondary Structure
MEAFRIFIEGISNFTLGHLIMLAIGGILIYLAIKKEYEPMLLLPIGFGIILTNIPLSAAI
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHCCCHHHHC
GKNGFLTLLYNAGINTELFPILIFIAVGAMVDFTPLFQQPFMIFFGAAAQVGIFLTMIVA
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
YLMGFDIGEAASIGIIGAADGPTSIYVSTLFAPHLLGPISVAAYSYMALVPIIQPPIIRM
HHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHH
LTTKEERRIRMELELKEVPKVVRIIFPIAVTLITGILIPQSVPLIGSLMFGNLIKESGVV
HCCCHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
ERLSKAAQNELANITTILLGITIGATMTPDRFLNPATLLIFGMGLLAFIFDTAGGVLFAK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHH
FLNLFLKRKVNPMIGAAGISAFPMSARVIQKMAQQEDFTNFVLMQSVAANVSGQIGSVVA
HHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGILIGLVSSLFM
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10027965 [H]