Click here to switch to the map view.

The map label for this gene is PorB2 [H]

Identifier: 20807665

GI number: 20807665

Start: 1210968

End: 1211792

Strand: Direct

Name: PorB2 [H]

Synonym: TTE1210

Alternate gene names: 20807665

Gene position: 1210968-1211792 (Clockwise)

Preceding gene: 20807664

Following gene: 20807666

Centisome position: 45.03

GC content: 43.76

Gene sequence:

>825_bases
ATGGCTTCTAGGCTTGTGGAGGAATACTTCAGAAAGGAAACGTTACCAAACATATGGTGCCCAGGCTGTAGCAATGGAAT
AGTGGCAATGGCAATAGTGAGAGCGATAGACAACTTAAAAATTGGCAAAGACAAAGTGGTAGTAGTATCAGGGATAGGAT
GTTCTTCAAGGGCTTCAGGTTACTTAGACTTTAACACCTTACACACCACTCACGGCAGGGCAATAGCTTTTGCCACAGGA
GTAAAATTTGCAAATCCAGAACTTACGGTGATAGTGATAACAGGGGACGGGGACAATGCGGCTATAGGTGGAAACCATTT
CATCCACGCAGCGAGGAGGAACATAGACATAACGGTCGTCATGTACAACAACCACATATACGGCATGACAGGAGGTCAGG
CATCACCTACAATACCAAGGTACGATAAAGCCACAACAGCACCCTATGGCAGCATAGACAGGGATTTTGACATATGCAAA
TTGGCTATAGGTGCAGGAGCAACTTATGTGGCCAGAGGCACAGCCTATCACGTACAGCAACTTGTAAAACTCATAGAAAA
AGGGATTTCCCACAAAGGCTTTTCTTTCATTGAAGCCATGAGCATATGCCCCACCTACTATGGCAGAAGGAACAAAAAGG
GAAGCCCAGCAGACATGTTGAAGTGGCTTAAAGATAATTCGATTGACATAAACAAGGCAGCTAAAATGAAGCCGGAAGAA
TTGGAAGGCAAGATAATAATAGGCGAATTTGTAAACATAGAGGCTCCTGAGTACACAGAAGAGTATCAAAAGATGGTAGA
GAGATTGAAGGTGAGTGTAAAATGA

Upstream 100 bases:

>100_bases
GTAGTAAAGAGGGAAGGGGAGGTAGAGAATATAAACAAGGCGAACGGGGAATTTTTTACTCCTTGTGAAATTGTAGAGAA
GGTAAAGGAGAGAATAAAAA

Downstream 100 bases:

>100_bases
GGTCGCTTGAAATAAGGTTAGGAGGGTCTGGAGGACAGGGGTTAATTCTTGCAGGAATAATTTTGGCAGAAGCGGCAATA
CTGGATGGGAAGGTAAGCGT

Product: 2-oxoglutarate ferredoxin oxidoreductase subunit beta

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase beta chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit beta [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MASRLVEEYFRKETLPNIWCPGCSNGIVAMAIVRAIDNLKIGKDKVVVVSGIGCSSRASGYLDFNTLHTTHGRAIAFATG
VKFANPELTVIVITGDGDNAAIGGNHFIHAARRNIDITVVMYNNHIYGMTGGQASPTIPRYDKATTAPYGSIDRDFDICK
LAIGAGATYVARGTAYHVQQLVKLIEKGISHKGFSFIEAMSICPTYYGRRNKKGSPADMLKWLKDNSIDINKAAKMKPEE
LEGKIIIGEFVNIEAPEYTEEYQKMVERLKVSVK

Sequences:

>Translated_274_residues
MASRLVEEYFRKETLPNIWCPGCSNGIVAMAIVRAIDNLKIGKDKVVVVSGIGCSSRASGYLDFNTLHTTHGRAIAFATG
VKFANPELTVIVITGDGDNAAIGGNHFIHAARRNIDITVVMYNNHIYGMTGGQASPTIPRYDKATTAPYGSIDRDFDICK
LAIGAGATYVARGTAYHVQQLVKLIEKGISHKGFSFIEAMSICPTYYGRRNKKGSPADMLKWLKDNSIDINKAAKMKPEE
LEGKIIIGEFVNIEAPEYTEEYQKMVERLKVSVK
>Mature_273_residues
ASRLVEEYFRKETLPNIWCPGCSNGIVAMAIVRAIDNLKIGKDKVVVVSGIGCSSRASGYLDFNTLHTTHGRAIAFATGV
KFANPELTVIVITGDGDNAAIGGNHFIHAARRNIDITVVMYNNHIYGMTGGQASPTIPRYDKATTAPYGSIDRDFDICKL
AIGAGATYVARGTAYHVQQLVKLIEKGISHKGFSFIEAMSICPTYYGRRNKKGSPADMLKWLKDNSIDINKAAKMKPEEL
EGKIIIGEFVNIEAPEYTEEYQKMVERLKVSVK

Specific function: Unknown

COG id: COG1013

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011766 [H]

Pfam domain/function: PF02775 TPP_enzyme_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 30069; Mature: 29938

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRLVEEYFRKETLPNIWCPGCSNGIVAMAIVRAIDNLKIGKDKVVVVSGIGCSSRASG
CHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
YLDFNTLHTTHGRAIAFATGVKFANPELTVIVITGDGDNAAIGGNHFIHAARRNIDITVV
EEEECEEECCCCCEEEEEECCEECCCCEEEEEEECCCCCCEECCCCEEEEECCCCEEEEE
MYNNHIYGMTGGQASPTIPRYDKATTAPYGSIDRDFDICKLAIGAGATYVARGTAYHVQQ
EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEEECCHHHHHHH
LVKLIEKGISHKGFSFIEAMSICPTYYGRRNKKGSPADMLKWLKDNSIDINKAAKMKPEE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHH
LEGKIIIGEFVNIEAPEYTEEYQKMVERLKVSVK
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASRLVEEYFRKETLPNIWCPGCSNGIVAMAIVRAIDNLKIGKDKVVVVSGIGCSSRASG
HHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCC
YLDFNTLHTTHGRAIAFATGVKFANPELTVIVITGDGDNAAIGGNHFIHAARRNIDITVV
EEEECEEECCCCCEEEEEECCEECCCCEEEEEEECCCCCCEECCCCEEEEECCCCEEEEE
MYNNHIYGMTGGQASPTIPRYDKATTAPYGSIDRDFDICKLAIGAGATYVARGTAYHVQQ
EECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECCCCCEEEECCHHHHHHH
LVKLIEKGISHKGFSFIEAMSICPTYYGRRNKKGSPADMLKWLKDNSIDINKAAKMKPEE
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHCCCHHH
LEGKIIIGEFVNIEAPEYTEEYQKMVERLKVSVK
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]