| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20807602
Identifier: 20807602
GI number: 20807602
Start: 1145713
End: 1146501
Strand: Direct
Name: 20807602
Synonym: TTE1145
Alternate gene names: NA
Gene position: 1145713-1146501 (Clockwise)
Preceding gene: 20807601
Following gene: 20807603
Centisome position: 42.6
GC content: 37.9
Gene sequence:
>789_bases ATGGTGAGTGTAGTGAAAGCAATTAAAGCTGAGTTTTTTAAGTTTTACTTTGACCTAAAGCGATACTTATTCAACTACAT TGTTGGACTTATTTCAACTGCTATTTTTTTGAGTGGGCTCTACTGGGCAGTAAATTCCTTGTTTACGCAGAGTGGGCAGG CAGTAGCTTTTGTTGGATTGCTGCTGTGGCTTTTTACCCCATCTGCGTTATCTGATGCCACAAGTCATCTTGCAGAGGAA CGATACTTGGGAACGCTGGAACGCATATCTATAACCAAGACCCCATTTATTCATATTTTGATTGCTCGCAATATTGTGCA TTGCCTGTTTACTCTAATTCAGACTCTTGTGGTTGGTGGCATACTCTATGTGGTGTTTAAGCCTGACTTAAGCTATATGT CCTCATCATGGAGAGTAACTGCGATGGCAGTAGTTATCGGTATGTTGATAATCCTTACTCTTTATGCCTTTGGATTTTTC ATAGCATCTTTGGGGATGATTTTTAAACGGGTAGGAGCAACGACATCTATTCTAGAATATCTTATTTTATTCTTTTCAGG AATAGTCATACCCTGGAGTACCATGCCAGCTTCACTACAAGCTTTTTCTAATATATTGCCAATGACTTGGGGAGTAAAAG CACTTGAGAGCCTAATTAATGGCGGTAATTTTATTGGAAGTTTTGTAGGACTAGTAGTTTATACAGTATTAATTGCCATA ATTTCTATAGTAACCTTCCGGTATGCCATGCTAGTTGTTAAGAAAAAAGGAGAATATGCTTTTTATTAA
Upstream 100 bases:
>100_bases GCAAAAGGAATTGTTTTATTCGGTTTTTTCCGATCCTGATTTTAAGTGTTAAACTTGGAGAAAAAAAGTCCGGATTTTGA GGCGATTTTTAGGAGGTTAT
Downstream 100 bases:
>100_bases TATGCTATCTAAGGATATGTAAGTCCCTGTTTTTGAAGTTAAGAAACAGGGACTTAGCAAGTTATAACAATGCCTTATGT TGCAGGTGTATTAGTGAGCC
Product: ABC-type multidrug transport system, permease component
Products: NA
Alternate protein names: Multidrug ABC Transporter; ABC Transporter; ABC-2 Type Transporter Superfamily Protein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MVSVVKAIKAEFFKFYFDLKRYLFNYIVGLISTAIFLSGLYWAVNSLFTQSGQAVAFVGLLLWLFTPSALSDATSHLAEE RYLGTLERISITKTPFIHILIARNIVHCLFTLIQTLVVGGILYVVFKPDLSYMSSSWRVTAMAVVIGMLIILTLYAFGFF IASLGMIFKRVGATTSILEYLILFFSGIVIPWSTMPASLQAFSNILPMTWGVKALESLINGGNFIGSFVGLVVYTVLIAI ISIVTFRYAMLVVKKKGEYAFY
Sequences:
>Translated_262_residues MVSVVKAIKAEFFKFYFDLKRYLFNYIVGLISTAIFLSGLYWAVNSLFTQSGQAVAFVGLLLWLFTPSALSDATSHLAEE RYLGTLERISITKTPFIHILIARNIVHCLFTLIQTLVVGGILYVVFKPDLSYMSSSWRVTAMAVVIGMLIILTLYAFGFF IASLGMIFKRVGATTSILEYLILFFSGIVIPWSTMPASLQAFSNILPMTWGVKALESLINGGNFIGSFVGLVVYTVLIAI ISIVTFRYAMLVVKKKGEYAFY >Mature_262_residues MVSVVKAIKAEFFKFYFDLKRYLFNYIVGLISTAIFLSGLYWAVNSLFTQSGQAVAFVGLLLWLFTPSALSDATSHLAEE RYLGTLERISITKTPFIHILIARNIVHCLFTLIQTLVVGGILYVVFKPDLSYMSSSWRVTAMAVVIGMLIILTLYAFGFF IASLGMIFKRVGATTSILEYLILFFSGIVIPWSTMPASLQAFSNILPMTWGVKALESLINGGNFIGSFVGLVVYTVLIAI ISIVTFRYAMLVVKKKGEYAFY
Specific function: Unknown
COG id: COG0842
COG function: function code V; ABC-type multidrug transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29200; Mature: 29200
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS51012 ABC_TM2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVVKAIKAEFFKFYFDLKRYLFNYIVGLISTAIFLSGLYWAVNSLFTQSGQAVAFVGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLWLFTPSALSDATSHLAEERYLGTLERISITKTPFIHILIARNIVHCLFTLIQTLVVGG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILYVVFKPDLSYMSSSWRVTAMAVVIGMLIILTLYAFGFFIASLGMIFKRVGATTSILEY HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LILFFSGIVIPWSTMPASLQAFSNILPMTWGVKALESLINGGNFIGSFVGLVVYTVLIAI HHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISIVTFRYAMLVVKKKGEYAFY HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVSVVKAIKAEFFKFYFDLKRYLFNYIVGLISTAIFLSGLYWAVNSLFTQSGQAVAFVGL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LLWLFTPSALSDATSHLAEERYLGTLERISITKTPFIHILIARNIVHCLFTLIQTLVVGG HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ILYVVFKPDLSYMSSSWRVTAMAVVIGMLIILTLYAFGFFIASLGMIFKRVGATTSILEY HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LILFFSGIVIPWSTMPASLQAFSNILPMTWGVKALESLINGGNFIGSFVGLVVYTVLIAI HHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ISIVTFRYAMLVVKKKGEYAFY HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA