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The map label for this gene is yebC [C]

Identifier: 20807595

GI number: 20807595

Start: 1136580

End: 1137317

Strand: Direct

Name: yebC [C]

Synonym: TTE1135

Alternate gene names: 20807595

Gene position: 1136580-1137317 (Clockwise)

Preceding gene: 20807594

Following gene: 20807597

Centisome position: 42.26

GC content: 39.84

Gene sequence:

>738_bases
ATGTTTATGGCTGGACATTCCAAATGGGCTAATATAAAGCACAAAAAAGAAAAAATGGACGCTAAAAAAGGGAGAATCTT
TACTAAACTTACAAAAGATATCATAAAAGCGGCAAAAGAGGGAGGGGGAGACCCCGAGACTAACAGTAAACTGAAATTAG
CAATTGAAAGGGCAAAAGCCTTTAATTTGCCCAGTGAAAATATTCAAAGGGCTATTAAGAGAGGTACTGGTGAATTAGGA
GGAGCAAAGCTTGAAGAGGTAATTTACGAAGGATATGGCCCGGCAGGTACAGCTATAATTGTTGAGGCTTTAACCGACAA
CAAGAACCGCACAGCAGGTGAAATAAGGCATATTTTTGACAGAAATGGCGGCACTCTGGGGGCTGCTGGATCTGTAACAT
GGATGTTTGACAAAGTAGGAGTTATAGTAGTGGAAAAAACTGATTCCATAAATGAAGAGGACTTGATGATGGTGGCGATA
GAGGCCGGAGCGGAGGATTTTTCGGCGGACGAGGGAGAATTTGAGATTATAACTGACCCTTCTAATTTCCAAGAAGTAAG
GGAGGCTATAGAAAAAGCAGGATATAAAATTTCTGAGGCAGAAATTACAATGCTTCCTAAAAACACCATTAAGCTAAGTC
CTGAAGACTATGAGAAATTCGAGAAATTGATTGACAAACTTGAGGACAATGACGATGTTCAGAATGTTTACCACAATGTA
GAATTAGAAGATGAGTAG

Upstream 100 bases:

>100_bases
AGCTAAGAAATTAGGAAAAGGGAAGAAAGTCCTTGCGATAGCGCCAGACAGTGGAGAAAGGTATTTAAGCACTCAGATTT
TCAGAGAACATTGAGGAGGG

Downstream 100 bases:

>100_bases
GAATAAAAAGAAAGAGATAGAAAGCTAAATATGCTCTATCTCTTTCTTTTCTTTTTCTGTAAGTATTTTATGTAAGTCAA
GGTTGATAATCAACCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MFMAGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKAFNLPSENIQRAIKRGTGELG
GAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFDRNGGTLGAAGSVTWMFDKVGVIVVEKTDSINEEDLMMVAI
EAGAEDFSADEGEFEIITDPSNFQEVREAIEKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNV
ELEDE

Sequences:

>Translated_245_residues
MFMAGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKAFNLPSENIQRAIKRGTGELG
GAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFDRNGGTLGAAGSVTWMFDKVGVIVVEKTDSINEEDLMMVAI
EAGAEDFSADEGEFEIITDPSNFQEVREAIEKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNV
ELEDE
>Mature_245_residues
MFMAGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKAFNLPSENIQRAIKRGTGELG
GAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFDRNGGTLGAAGSVTWMFDKVGVIVVEKTDSINEEDLMMVAI
EAGAEDFSADEGEFEIITDPSNFQEVREAIEKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNV
ELEDE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=35.6275303643725, Blast_Score=161, Evalue=6e-40,
Organism=Escherichia coli, GI1788171, Length=244, Percent_Identity=48.7704918032787, Blast_Score=245, Evalue=3e-66,
Organism=Escherichia coli, GI1788294, Length=234, Percent_Identity=44.017094017094, Blast_Score=186, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17556100, Length=244, Percent_Identity=27.4590163934426, Blast_Score=88, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.6996197718631, Blast_Score=125, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24583305, Length=249, Percent_Identity=29.718875502008, Blast_Score=104, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 27184; Mature: 27184

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMAGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKA
CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHH
FNLPSENIQRAIKRGTGELGGAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFD
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
RNGGTLGAAGSVTWMFDKVGVIVVEKTDSINEEDLMMVAIEAGAEDFSADEGEFEIITDP
CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECC
SNFQEVREAIEKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNV
CCHHHHHHHHHHCCCEECCCEEEEECCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHCC
ELEDE
EECCC
>Mature Secondary Structure
MFMAGHSKWANIKHKKEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKA
CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHH
FNLPSENIQRAIKRGTGELGGAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFD
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
RNGGTLGAAGSVTWMFDKVGVIVVEKTDSINEEDLMMVAIEAGAEDFSADEGEFEIITDP
CCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECC
SNFQEVREAIEKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNV
CCHHHHHHHHHHCCCEECCCEEEEECCCCEEECCHHHHHHHHHHHHHCCCCHHHHHHHCC
ELEDE
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]