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The map label for this gene is ytcJ [H]

Identifier: 20807540

GI number: 20807540

Start: 1065807

End: 1067411

Strand: Direct

Name: ytcJ [H]

Synonym: TTE1066

Alternate gene names: 20807540

Gene position: 1065807-1067411 (Clockwise)

Preceding gene: 20807538

Following gene: 20807541

Centisome position: 39.63

GC content: 40.31

Gene sequence:

>1605_bases
ATGGATGTTGTAGGGTTTGTAAATGGAAAGATTTATACACGTTTTAATCCAAAGAAGATCGTAAATGCGTTAGTAGTGGT
AAATGAACGAGTGGTCTATGCAGGAGAAAATGAAAAAGCAAAGGAGATTGTAAAATTTCTAAATGGGGAAGTAGTTGATT
TGGAAGGCAAAACCGTTCTACCAGGCTTTATAGACTCCCACATGCATCTTGACGAACTAGGAATGTACCTGAATATGGTT
GACTTAAGAGGGGTTAGAAGCATAAAGGAGCTGAAGAAGAAAATCGGGGATTATGCCGAAAAAGCGCAAACTACTTGGGT
TATCGGGCATGGTTGGGATCAAGAACTATTTGAGGAAAAGAGCTGGCCAACAAGATGGGATTTAGACGAAGTTGTAAAAG
ATAGGCCTGTTATGCTTTCAAGAGTTTGCTTACATGCAGGTGTTCTTAACACTAAGGCAATGAAACTCACTGGACTTTTA
GAAATTGACTCTCCTGGAGTAATAAAGAACGAGGATGGAGAACCTACTGGGATAGTTGAAGAAGAGGCATTTGAACTTGC
GAGAGAGAAATTCAAGGAAACCTTGACTTTAGAAGATTATGAAAAGTTCTTTAAAAATGCAATGAGCTTTGCTGCCTCCC
AGGGGGTAACTACAGTAGGCTTTGTAAGTTGTGATGAGAAATCGATACAAGGACTTAGCAGACTAAAAGAAAAAGTGAAC
TTCTTAATAAGAGTTATAGTTTATCTAGAGCCGGGCAGAAGAGAAGTGAGCAATAAGGGAATGTACGGGAACAAAGATAT
TTTAGAGTCACTCAAAAAGCTTGGAACTAAGAGAGGGTTTGGAGATGAGAAGCTCAAGATTAATGGGATTAAAATTCTTG
CCGATGGGAGCTTAGGGGCTAGAACTGCCTGGCTTTCCAAACCGTATAGTGATGAACCATCTACAAGCGGTTATCCAAAC
ATTGATAAGAAAACATTAAAAGAGCTTATTAAAGAAGCACATGAAGCTGGACTGCAATTGGCGATTCACGGAATCGGGGA
TAAAACAATAGATATGATCCTCGACGCTTACGAGAATCTTGGAGATATTAAGAATGGAAGGCACAGGATAGAGCATGCGT
CGATTTTGAGAAAGGACCAAATCAAGAGAATAGCAAGACTTGGAGTGGTAGCTTCAGTACAGCCACGCTTTGTAATAACT
GACTGGTGGGCAAAGAGCAGGGTTGGAGATGAAAGGGTTAAGTGGATTTATCCATTTAAGAGTATGCTTGAGAATGATGT
AAGCATTGGCTTTGGAACCGATTGCCCTGTTGAGGTCCTTAACCCATGGGAGACAGTTTATGCAGCGGTAACTAGAGGAA
AATACGAAAATGTGCCCTATTATGAAGACAGTAAAGAGGAGTGCTTAACATTAGAAGAAGCTCTCTATGCCTACACGTTT
GGTTCTGCCTACATAATGTTCGAAGAGGTCAATCTGGGAACTCTCGAAGAAAGAAAGCTGGCGGACTTCATAGTCGTTGA
TAGAGATCCCTTTGAAGTCGAGGAAAATGAACTGAAAGGAATAAAAATCTTGGAAACCTATGTTGGAGGTAAGAGAGTAT
TTTAA

Upstream 100 bases:

>100_bases
CAAAAGAAGATACCGAGCGAAAAGCAGGGACATAAGGATGAACCCTTTCAATACCTTTTTCAATATTTCAATTCTATACC
CAACAATGGAGGGATGAAGT

Downstream 100 bases:

>100_bases
TTCCTTGGTCAGGTCCAAATTTTTGTGTAAAATTCCTCTGGTTAGACATTTATGATGCAATAAGCATCACCAGCAGAGGA
TGAAAATACTCATAAAATCT

Product: metal-dependent hydrolase with the TIM-barrel fold

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MDVVGFVNGKIYTRFNPKKIVNALVVVNERVVYAGENEKAKEIVKFLNGEVVDLEGKTVLPGFIDSHMHLDELGMYLNMV
DLRGVRSIKELKKKIGDYAEKAQTTWVIGHGWDQELFEEKSWPTRWDLDEVVKDRPVMLSRVCLHAGVLNTKAMKLTGLL
EIDSPGVIKNEDGEPTGIVEEEAFELAREKFKETLTLEDYEKFFKNAMSFAASQGVTTVGFVSCDEKSIQGLSRLKEKVN
FLIRVIVYLEPGRREVSNKGMYGNKDILESLKKLGTKRGFGDEKLKINGIKILADGSLGARTAWLSKPYSDEPSTSGYPN
IDKKTLKELIKEAHEAGLQLAIHGIGDKTIDMILDAYENLGDIKNGRHRIEHASILRKDQIKRIARLGVVASVQPRFVIT
DWWAKSRVGDERVKWIYPFKSMLENDVSIGFGTDCPVEVLNPWETVYAAVTRGKYENVPYYEDSKEECLTLEEALYAYTF
GSAYIMFEEVNLGTLEERKLADFIVVDRDPFEVEENELKGIKILETYVGGKRVF

Sequences:

>Translated_534_residues
MDVVGFVNGKIYTRFNPKKIVNALVVVNERVVYAGENEKAKEIVKFLNGEVVDLEGKTVLPGFIDSHMHLDELGMYLNMV
DLRGVRSIKELKKKIGDYAEKAQTTWVIGHGWDQELFEEKSWPTRWDLDEVVKDRPVMLSRVCLHAGVLNTKAMKLTGLL
EIDSPGVIKNEDGEPTGIVEEEAFELAREKFKETLTLEDYEKFFKNAMSFAASQGVTTVGFVSCDEKSIQGLSRLKEKVN
FLIRVIVYLEPGRREVSNKGMYGNKDILESLKKLGTKRGFGDEKLKINGIKILADGSLGARTAWLSKPYSDEPSTSGYPN
IDKKTLKELIKEAHEAGLQLAIHGIGDKTIDMILDAYENLGDIKNGRHRIEHASILRKDQIKRIARLGVVASVQPRFVIT
DWWAKSRVGDERVKWIYPFKSMLENDVSIGFGTDCPVEVLNPWETVYAAVTRGKYENVPYYEDSKEECLTLEEALYAYTF
GSAYIMFEEVNLGTLEERKLADFIVVDRDPFEVEENELKGIKILETYVGGKRVF
>Mature_534_residues
MDVVGFVNGKIYTRFNPKKIVNALVVVNERVVYAGENEKAKEIVKFLNGEVVDLEGKTVLPGFIDSHMHLDELGMYLNMV
DLRGVRSIKELKKKIGDYAEKAQTTWVIGHGWDQELFEEKSWPTRWDLDEVVKDRPVMLSRVCLHAGVLNTKAMKLTGLL
EIDSPGVIKNEDGEPTGIVEEEAFELAREKFKETLTLEDYEKFFKNAMSFAASQGVTTVGFVSCDEKSIQGLSRLKEKVN
FLIRVIVYLEPGRREVSNKGMYGNKDILESLKKLGTKRGFGDEKLKINGIKILADGSLGARTAWLSKPYSDEPSTSGYPN
IDKKTLKELIKEAHEAGLQLAIHGIGDKTIDMILDAYENLGDIKNGRHRIEHASILRKDQIKRIARLGVVASVQPRFVIT
DWWAKSRVGDERVKWIYPFKSMLENDVSIGFGTDCPVEVLNPWETVYAAVTRGKYENVPYYEDSKEECLTLEEALYAYTF
GSAYIMFEEVNLGTLEERKLADFIVVDRDPFEVEENELKGIKILETYVGGKRVF

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 60506; Mature: 60506

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS01137 TATD_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVGFVNGKIYTRFNPKKIVNALVVVNERVVYAGENEKAKEIVKFLNGEVVDLEGKTVL
CCCEEEECCEEEEEECHHHHHHHHHEEECEEEEECCCHHHHHHHHHHCCCEEEECCCEEC
PGFIDSHMHLDELGMYLNMVDLRGVRSIKELKKKIGDYAEKAQTTWVIGHGWDQELFEEK
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCC
SWPTRWDLDEVVKDRPVMLSRVCLHAGVLNTKAMKLTGLLEIDSPGVIKNEDGEPTGIVE
CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEECCCCCCCCCCH
EEAFELAREKFKETLTLEDYEKFFKNAMSFAASQGVTTVGFVSCDEKSIQGLSRLKEKVN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
FLIRVIVYLEPGRREVSNKGMYGNKDILESLKKLGTKRGFGDEKLKINGIKILADGSLGA
HHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCC
RTAWLSKPYSDEPSTSGYPNIDKKTLKELIKEAHEAGLQLAIHGIGDKTIDMILDAYENL
CHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
GDIKNGRHRIEHASILRKDQIKRIARLGVVASVQPRFVITDWWAKSRVGDERVKWIYPFK
HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCEEEEECHHHCCCCCCHHEEEECHH
SMLENDVSIGFGTDCPVEVLNPWETVYAAVTRGKYENVPYYEDSKEECLTLEEALYAYTF
HHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
GSAYIMFEEVNLGTLEERKLADFIVVDRDPFEVEENELKGIKILETYVGGKRVF
CCEEEEEEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MDVVGFVNGKIYTRFNPKKIVNALVVVNERVVYAGENEKAKEIVKFLNGEVVDLEGKTVL
CCCEEEECCEEEEEECHHHHHHHHHEEECEEEEECCCHHHHHHHHHHCCCEEEECCCEEC
PGFIDSHMHLDELGMYLNMVDLRGVRSIKELKKKIGDYAEKAQTTWVIGHGWDQELFEEK
CCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHCC
SWPTRWDLDEVVKDRPVMLSRVCLHAGVLNTKAMKLTGLLEIDSPGVIKNEDGEPTGIVE
CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCEECCCCCCCCCCH
EEAFELAREKFKETLTLEDYEKFFKNAMSFAASQGVTTVGFVSCDEKSIQGLSRLKEKVN
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHH
FLIRVIVYLEPGRREVSNKGMYGNKDILESLKKLGTKRGFGDEKLKINGIKILADGSLGA
HHHHEEEEECCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCC
RTAWLSKPYSDEPSTSGYPNIDKKTLKELIKEAHEAGLQLAIHGIGDKTIDMILDAYENL
CHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHH
GDIKNGRHRIEHASILRKDQIKRIARLGVVASVQPRFVITDWWAKSRVGDERVKWIYPFK
HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEECCCCEEEEECHHHCCCCCCHHEEEECHH
SMLENDVSIGFGTDCPVEVLNPWETVYAAVTRGKYENVPYYEDSKEECLTLEEALYAYTF
HHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEE
GSAYIMFEEVNLGTLEERKLADFIVVDRDPFEVEENELKGIKILETYVGGKRVF
CCEEEEEEECCCCCCCHHCCCCEEEECCCCCCCCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]