| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is SrmR [C]
Identifier: 20807510
GI number: 20807510
Start: 1036561
End: 1037493
Strand: Direct
Name: SrmR [C]
Synonym: TTE1031
Alternate gene names: 20807510
Gene position: 1036561-1037493 (Clockwise)
Preceding gene: 20807508
Following gene: 20807511
Centisome position: 38.54
GC content: 29.9
Gene sequence:
>933_bases ATGGGAGAAATCCCATTTGAGCAATCATATGCGATTAAAGATTTGGGTAACGAGTTAGAGAAGTTAATGAGAAAAATTAA TGGCTTAAATTTACCTCTTTATGATGAGAATTTTGCTCTAATTTGTGAACTACAAATAGACATGCCACAAAACAAGCACG AGGAAGAGTTCATAAAGAGAAAAACAAAAGATTTTTTAAGAAATGCGTTAGATACACATTTTCTTTTTACTTTACCTAAA ACCGATGAAATATTATTATTTCTTGGGTTTGATAGAAATAGATATGAAAATCGGACATATAGGAATATGTTAAGAGAAGT TTTTTGTAAACTGCAAAGAGAAATACGCACTTTAACTTCACATTTCAAATTAGTAGTAGGAGTCAGTTCATCAATAAAAG GGGAGTTTTCCTTTAAAAAAGCCTATACTGAGGCTCATGTAGCGAAAGAGGTAGGAAAGAGGATTTACAAGGAAGAAACC CTTACTTTTTATGACGATTTAGGTATATACAAATTTTTGCGTTTTGTTGATAGAGAAGATATTTTGAAAGACGAAAGTAT CCGTTGTATTTACGAATATGACAAAAAGCACAATACAAATCTACTAGAAACCTTAGAAGCATTTATGGATAATAATGGAA GTATAAAGAAGACGGCTGAGAAAACTTTTATGCATCCAAATACGATTAAATATAGGTTAAATAAAATAAAGGAATTGGCA GGAGAAGATATACTAAAGGACGAAAGTAAGAGATTCTACTACTATCTATTGACAAAAGCAATAAGACTAATTTTGGATTT GAGTAATGTGTTTACTATTCATAGCAAAAAATACACAACATGCTATTTTTTTTGTCCTTTTAAGACATATGTTTTTTCCA ATACTGTTATTATAATTAAATTTAAGCGAAAGCTCCAAAATTATAGGAGGTGA
Upstream 100 bases:
>100_bases AAAAAAAAAAAATATTAGATAATTCAAAAGGATTTTATCGAATTTTGTCGAATATAAATAAAAAAAGAGGATTAGGTTAT TTATGGGGAGGGTTTATTGC
Downstream 100 bases:
>100_bases ACTTTAGATAGCATAAAAGCACAAAAGAAAAAATGTTAAAGGAAGGTAGAGCATGACATCTGACGTTACTCATTCTTTAT TTTACATGCTACTAGCAAGA
Product: regulator of polyketide synthase expression
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator PucR Family; CdaR Family Transcriptional Regulator; Purine Catabolism Regulatory Protein; PucR Family Transcriptional Regulator; Purine Catabolism PurC Domain-Containing Protein; Purine Catabolism PurC-Like Protein; Regulator Of Polyketide Synthase Expression; Regulatory Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGEIPFEQSYAIKDLGNELEKLMRKINGLNLPLYDENFALICELQIDMPQNKHEEEFIKRKTKDFLRNALDTHFLFTLPK TDEILLFLGFDRNRYENRTYRNMLREVFCKLQREIRTLTSHFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEET LTFYDDLGIYKFLRFVDREDILKDESIRCIYEYDKKHNTNLLETLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKELA GEDILKDESKRFYYYLLTKAIRLILDLSNVFTIHSKKYTTCYFFCPFKTYVFSNTVIIIKFKRKLQNYRR
Sequences:
>Translated_310_residues MGEIPFEQSYAIKDLGNELEKLMRKINGLNLPLYDENFALICELQIDMPQNKHEEEFIKRKTKDFLRNALDTHFLFTLPK TDEILLFLGFDRNRYENRTYRNMLREVFCKLQREIRTLTSHFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEET LTFYDDLGIYKFLRFVDREDILKDESIRCIYEYDKKHNTNLLETLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKELA GEDILKDESKRFYYYLLTKAIRLILDLSNVFTIHSKKYTTCYFFCPFKTYVFSNTVIIIKFKRKLQNYRR >Mature_309_residues GEIPFEQSYAIKDLGNELEKLMRKINGLNLPLYDENFALICELQIDMPQNKHEEEFIKRKTKDFLRNALDTHFLFTLPKT DEILLFLGFDRNRYENRTYRNMLREVFCKLQREIRTLTSHFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEETL TFYDDLGIYKFLRFVDREDILKDESIRCIYEYDKKHNTNLLETLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKELAG EDILKDESKRFYYYLLTKAIRLILDLSNVFTIHSKKYTTCYFFCPFKTYVFSNTVIIIKFKRKLQNYRR
Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37198; Mature: 37066
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEIPFEQSYAIKDLGNELEKLMRKINGLNLPLYDENFALICELQIDMPQNKHEEEFIKR CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCCCHHHHHHH KTKDFLRNALDTHFLFTLPKTDEILLFLGFDRNRYENRTYRNMLREVFCKLQREIRTLTS HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEETLTFYDDLGIYKFLRFVDRED HHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ILKDESIRCIYEYDKKHNTNLLETLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKELA HCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHH GEDILKDESKRFYYYLLTKAIRLILDLSNVFTIHSKKYTTCYFFCPFKTYVFSNTVIIIK CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCHHHHHHCCCEEEEE FKRKLQNYRR EHHHHHCCCC >Mature Secondary Structure GEIPFEQSYAIKDLGNELEKLMRKINGLNLPLYDENFALICELQIDMPQNKHEEEFIKR CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEEEEECCCCCCCHHHHHHH KTKDFLRNALDTHFLFTLPKTDEILLFLGFDRNRYENRTYRNMLREVFCKLQREIRTLTS HHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH HFKLVVGVSSSIKGEFSFKKAYTEAHVAKEVGKRIYKEETLTFYDDLGIYKFLRFVDRED HHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ILKDESIRCIYEYDKKHNTNLLETLEAFMDNNGSIKKTAEKTFMHPNTIKYRLNKIKELA HCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCEEHHHHHHCCCCCHHHHHHHHHHHHH GEDILKDESKRFYYYLLTKAIRLILDLSNVFTIHSKKYTTCYFFCPFKTYVFSNTVIIIK CCHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEEEECCHHHHHHCCCEEEEE FKRKLQNYRR EHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA