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The map label for this gene is odh [H]

Identifier: 20807404

GI number: 20807404

Start: 927496

End: 928596

Strand: Direct

Name: odh [H]

Synonym: TTE0923

Alternate gene names: 20807404

Gene position: 927496-928596 (Clockwise)

Preceding gene: 20807403

Following gene: 20807405

Centisome position: 34.49

GC content: 40.69

Gene sequence:

>1101_bases
ATGAAAATGCCTTATTTTGCTGTAATCGGGGCGGGGAACGGGGGGCAGGCAATTGCAGGACATCTCGCTTTAAAAGGGTT
TAAAGTAAATTTATACAATAGAACTTATGAAAAATTGATTCCAATAATACAAAGAGGCGGTATAGAGCTAGAAGGAGAAG
TTGAAGGATTTGGGAAACTGAATCTTGTGACTGACGATATAAGCAAAGCCGTAAAAGATGTGGATATGATACTAGTTGCT
GTGCCTGCGTCTGCCCACGCCATGATTGCAGAAGAGCTTTTGCCCTACTTGCAAAGAGGCCAGATAGTGGTATTAAATCC
CGGAAGAACAGGGGGAGCATTGGAAGTTTACAACATACTTAAAAAGAGAAGTGATTTAGAGGTTGTTATTGCTGAAACTG
ATACTTTTATCTATGCCTGCAGGTCTTCTAATGGGAAAGCTAAAATATACAAGATTAAAGACATAGTATCAGTTGCGGCA
ATTCCTAAAGATAAAACGGAAGAAGTAGTGGAAATTCTCAATATCGCTTTTCCACAGTTTGTAGCTGCTGAGAACGTGTT
AGAAACCAGCTTCAACAATTTTGGAGCAATTTTCCATCCCGCTCCAACGCTTTTAAATGCTGCTCGGATTGAGACTACCA
AGGGAAATTTTGAGTACTATAGAGAAGGGATTTCGCCTTCTGTCGCCAAAATCCTTGAAAAGATTGACAATGAGAGAATG
ATGGTGGCAAAGGCTTTAGGCGTGAAAACTATCTCTGCTAAAAGATGGCTTAAAGAAAGTTACAATGCCGATGGGGATAC
GCTTTATGAAGCTATACAGAACACAAAAGCTTATATAGGGCTTATGGCTCCTGATACTGTAAATTGCAGGTATATTTTTG
AAGATGTTCCTATGAGCCTTGTGCCTATCTCTTCTATTGGGAAAGAAATAGGTGTAAAAACGCCCACAATTGACGCGATA
ATACATCTGGCATCCGTGATGCATGGAAAAGATTACTGGGAAATAGGGAGAACTGCCGATAAATTGGGAATACGTGGGAT
GTCGCCTAAGGAGATCATAGAACTAGTAGAAGGGAAGAGAAAGGAGGTTGCGACAGCATGA

Upstream 100 bases:

>100_bases
TAGCATGTAAGGTGTCTTATTGTCTTTTTTGGCACCGAAGATAAAGCTATAGAAGTCCTTCTATAGCTTTTTCATTTCTT
TAAAAAGGGGGTGTATGGGC

Downstream 100 bases:

>100_bases
GAAAGCTTATCGTGGCTGGTTCAATTGGAAATTGTGTCCATGTTGCTGGAGTGTACAATTTTTTGAGGTTTGCAGAACAG
CAGGGTTATGAGACGGTGTT

Product: NAD/NADP octopine/nopaline dehydrogenas

Products: NA

Alternate protein names: N-(1-D-carboxyethyl)-L-norvaline dehydrogenase [H]

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKMPYFAVIGAGNGGQAIAGHLALKGFKVNLYNRTYEKLIPIIQRGGIELEGEVEGFGKLNLVTDDISKAVKDVDMILVA
VPASAHAMIAEELLPYLQRGQIVVLNPGRTGGALEVYNILKKRSDLEVVIAETDTFIYACRSSNGKAKIYKIKDIVSVAA
IPKDKTEEVVEILNIAFPQFVAAENVLETSFNNFGAIFHPAPTLLNAARIETTKGNFEYYREGISPSVAKILEKIDNERM
MVAKALGVKTISAKRWLKESYNADGDTLYEAIQNTKAYIGLMAPDTVNCRYIFEDVPMSLVPISSIGKEIGVKTPTIDAI
IHLASVMHGKDYWEIGRTADKLGIRGMSPKEIIELVEGKRKEVATA

Sequences:

>Translated_366_residues
MKMPYFAVIGAGNGGQAIAGHLALKGFKVNLYNRTYEKLIPIIQRGGIELEGEVEGFGKLNLVTDDISKAVKDVDMILVA
VPASAHAMIAEELLPYLQRGQIVVLNPGRTGGALEVYNILKKRSDLEVVIAETDTFIYACRSSNGKAKIYKIKDIVSVAA
IPKDKTEEVVEILNIAFPQFVAAENVLETSFNNFGAIFHPAPTLLNAARIETTKGNFEYYREGISPSVAKILEKIDNERM
MVAKALGVKTISAKRWLKESYNADGDTLYEAIQNTKAYIGLMAPDTVNCRYIFEDVPMSLVPISSIGKEIGVKTPTIDAI
IHLASVMHGKDYWEIGRTADKLGIRGMSPKEIIELVEGKRKEVATA
>Mature_366_residues
MKMPYFAVIGAGNGGQAIAGHLALKGFKVNLYNRTYEKLIPIIQRGGIELEGEVEGFGKLNLVTDDISKAVKDVDMILVA
VPASAHAMIAEELLPYLQRGQIVVLNPGRTGGALEVYNILKKRSDLEVVIAETDTFIYACRSSNGKAKIYKIKDIVSVAA
IPKDKTEEVVEILNIAFPQFVAAENVLETSFNNFGAIFHPAPTLLNAARIETTKGNFEYYREGISPSVAKILEKIDNERM
MVAKALGVKTISAKRWLKESYNADGDTLYEAIQNTKAYIGLMAPDTVNCRYIFEDVPMSLVPISSIGKEIGVKTPTIDAI
IHLASVMHGKDYWEIGRTADKLGIRGMSPKEIIELVEGKRKEVATA

Specific function: In the forward direction acts also on secondary amine dicarboxylates such as N-(1-carboxyethyl)methionine and N-(1- carboxyethyl)phenylalanine. In the reverse direction, the enzyme also acts on neutral amino acids as an amino donor. They include L-amino a

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysopine/nopaline/octopine/opine/vitopine dehydrogenases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR011128
- InterPro:   IPR016040
- InterPro:   IPR003421 [H]

Pfam domain/function: PF01210 NAD_Gly3P_dh_N; PF02317 Octopine_DH [H]

EC number: =1.5.1.28 [H]

Molecular weight: Translated: 40122; Mature: 40122

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMPYFAVIGAGNGGQAIAGHLALKGFKVNLYNRTYEKLIPIIQRGGIELEGEVEGFGKL
CCCCEEEEEECCCCCCCEEHEEEEEEEEEEECHHHHHHHHHHHHHCCEEEEECCCCCEEE
NLVTDDISKAVKDVDMILVAVPASAHAMIAEELLPYLQRGQIVVLNPGRTGGALEVYNIL
EEEHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
KKRSDLEVVIAETDTFIYACRSSNGKAKIYKIKDIVSVAAIPKDKTEEVVEILNIAFPQF
HCCCCCEEEEEECCEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VAAENVLETSFNNFGAIFHPAPTLLNAARIETTKGNFEYYREGISPSVAKILEKIDNERM
HHHHHHHHHHHCCCCCEECCCHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHCCCCE
MVAKALGVKTISAKRWLKESYNADGDTLYEAIQNTKAYIGLMAPDTVNCRYIFEDVPMSL
EHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEE
VPISSIGKEIGVKTPTIDAIIHLASVMHGKDYWEIGRTADKLGIRGMSPKEIIELVEGKR
EEHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCHHHHHHHHCCCC
KEVATA
HHCCCC
>Mature Secondary Structure
MKMPYFAVIGAGNGGQAIAGHLALKGFKVNLYNRTYEKLIPIIQRGGIELEGEVEGFGKL
CCCCEEEEEECCCCCCCEEHEEEEEEEEEEECHHHHHHHHHHHHHCCEEEEECCCCCEEE
NLVTDDISKAVKDVDMILVAVPASAHAMIAEELLPYLQRGQIVVLNPGRTGGALEVYNIL
EEEHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHH
KKRSDLEVVIAETDTFIYACRSSNGKAKIYKIKDIVSVAAIPKDKTEEVVEILNIAFPQF
HCCCCCEEEEEECCEEEEEEECCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
VAAENVLETSFNNFGAIFHPAPTLLNAARIETTKGNFEYYREGISPSVAKILEKIDNERM
HHHHHHHHHHHCCCCCEECCCHHHHHHHHEEECCCCHHHHHCCCCHHHHHHHHHHCCCCE
MVAKALGVKTISAKRWLKESYNADGDTLYEAIQNTKAYIGLMAPDTVNCRYIFEDVPMSL
EHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCCCEE
VPISSIGKEIGVKTPTIDAIIHLASVMHGKDYWEIGRTADKLGIRGMSPKEIIELVEGKR
EEHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCHHHHHHHHCCCC
KEVATA
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7487048; 2753861; 9665174 [H]