| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is CstA [H]
Identifier: 20807350
GI number: 20807350
Start: 876692
End: 878488
Strand: Reverse
Name: CstA [H]
Synonym: TTE0869
Alternate gene names: 20807350
Gene position: 878488-876692 (Counterclockwise)
Preceding gene: 20807351
Following gene: 20807349
Centisome position: 32.66
GC content: 41.85
Gene sequence:
>1797_bases ATGAATGGCTTAACACTAGTAATCATCACACTAAGCGTCTACGCCCTGGCATACCGCTTTTATGGAGCATGGATCGGAGC AAAAATTTTAGCATTTGATGAAAACAGGACAACTCCTGCATACAGGCTTGAAAATGGCTACGATTACGTGCCAACAAACA AATGGGTTTTATTTGGTCACCACTTTGCAGCAATAGCAGGAGCAGGTCCTCTTGTAGGTCCAGTGCTCGCTGCCCAGTTT GGATACCTTCCAGGAGCATTATGGATTTTAATCGGAGCCGTCCTGGCAGGAGCAGTCCATGACATGGTAATACTGTTTGC ATCAGTCCGATATGATGGTTCCTCCATAATAGACATTGCAAGAAAAGAAGTAGGCAAAGTATCAGGTATAGCTACAGCTA TAGCAGTTCTATTTATACTTGTTCTTGCAATGGCAGGACTTGCACTAGTTGTAGTAAACGCTTTATACAACAGCCCGTGG GGTACTTTTACAGTAGCAGCTACAATTTTAATAGCAATGTACATGGGAATTCACATGAAGTATATAAGAAAGGACGACAT AGTAGGAGCTACAATAATAGGCGTTATACTGCTTGTATTGTCTGTTATAGCAGGACCTTATGTTGAAAAGACAGCGTTAG GGCATTTCCTCACTTTCAATGCCAAGCAAATGACAGTGATTTTAGCAACCTACGGTTTTGCCGCTGCAGTTTTACCTGTA TGGCTGTTACTTGTGCCAAGAGATTACCTCAGCACTTATCTAAAATTAGGCGTTATGGCACTTCTTGCTATAGGAGTTAT AATTGTAAACCCTGAAATAAGGATGCCTGCAATTACACAGTATGTAGCTGGAGGAGGTCCTATAATCCCCGGAAAGGTAT GGCCTTATGTGTTTATAACAATCGCCTGCGGTGCGATTTCAGGTTTCCACTCGCTAATATCTTCTGGAACAACACCTAAG ATGATCAAAAATGAAAAAGACATTCTACCTGTCGCATACGGAGCAATGCTGGCAGAGGGCTTTGTCGCAATGATGGCCTT GATTGCTGCAACAAGCTTAATACCAGCCGACTACTTCGCTATAAACGTTCCCCCGCAAGTGTTTGAAAAGTTAGGAATGC ATCCAGTCGAGCTTCAACACCTCTCTCAGATGGTGGGAGAAAATGTCGCAGGAAGACCTGGCGGCGGAGTGACACTGGCA GTTGGAATGACTTATATATTTGAAAAAATACCATGGATAGCCCATTTGAGCTCCTACATCTATCACTTTATAATATTGTT TGAAGCTCTATTCATACTGACTACAATAGACGCCGGAACAAGAGTAGGGAGATACCTCTTGCAGGAAGCAGGTGGCTTAA TTTACAAGCCTTTTGCAGATAGAAACTGGTGGCCAGGAATAATAATCACAAGCTTTTTAATCTCCTTCTCCTGGGGCTAC CTTGTTTACGGAGGAAGTGTATCTACAATCTGGCCTATATTTGGAGCTTCTAACCAGCTGCTTGCAGGAATAGCACTGGC ACTGGGTACAACTGTTATAATTAAAAAAGGCAAAGCCCAGCACGCATGGGTGACATTTGTGCCATTCCTGTTTGTGTCAA TTACTACTCTATATGCAAGTTATTTAAATATTGTAAATAACTACCTACCAAAAGGAAATTGGGTACTAGTAATTCTCTCT GCAGCAGTAATGATATTAGCCATCACAATAATAGTAGACTCCTTCATCAAGTGGTACAAATGGCTGGTTACTGATAAACT CACAAAAGAGCAGATTGAAGCAAGCGTATTTAATTAA
Upstream 100 bases:
>100_bases TAGAAATTTACCATCTCATCTTAAAATTGCTGAAAGCGTTTAATTAGTATGATAAATTTTAATATGCAAGATTTTAAACT CAACTTGGGAGGGATGGTGA
Downstream 100 bases:
>100_bases TGCAGAAACGGGGTGTGTTATTTGAAAATTAGTGACGCTGCAAAAGAATATATACTAAAAAAAGGCGGCAATATATACAT CAAATACCACGACATACGAA
Product: carbon starvation protein, membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MNGLTLVIITLSVYALAYRFYGAWIGAKILAFDENRTTPAYRLENGYDYVPTNKWVLFGHHFAAIAGAGPLVGPVLAAQF GYLPGALWILIGAVLAGAVHDMVILFASVRYDGSSIIDIARKEVGKVSGIATAIAVLFILVLAMAGLALVVVNALYNSPW GTFTVAATILIAMYMGIHMKYIRKDDIVGATIIGVILLVLSVIAGPYVEKTALGHFLTFNAKQMTVILATYGFAAAVLPV WLLLVPRDYLSTYLKLGVMALLAIGVIIVNPEIRMPAITQYVAGGGPIIPGKVWPYVFITIACGAISGFHSLISSGTTPK MIKNEKDILPVAYGAMLAEGFVAMMALIAATSLIPADYFAINVPPQVFEKLGMHPVELQHLSQMVGENVAGRPGGGVTLA VGMTYIFEKIPWIAHLSSYIYHFIILFEALFILTTIDAGTRVGRYLLQEAGGLIYKPFADRNWWPGIIITSFLISFSWGY LVYGGSVSTIWPIFGASNQLLAGIALALGTTVIIKKGKAQHAWVTFVPFLFVSITTLYASYLNIVNNYLPKGNWVLVILS AAVMILAITIIVDSFIKWYKWLVTDKLTKEQIEASVFN
Sequences:
>Translated_598_residues MNGLTLVIITLSVYALAYRFYGAWIGAKILAFDENRTTPAYRLENGYDYVPTNKWVLFGHHFAAIAGAGPLVGPVLAAQF GYLPGALWILIGAVLAGAVHDMVILFASVRYDGSSIIDIARKEVGKVSGIATAIAVLFILVLAMAGLALVVVNALYNSPW GTFTVAATILIAMYMGIHMKYIRKDDIVGATIIGVILLVLSVIAGPYVEKTALGHFLTFNAKQMTVILATYGFAAAVLPV WLLLVPRDYLSTYLKLGVMALLAIGVIIVNPEIRMPAITQYVAGGGPIIPGKVWPYVFITIACGAISGFHSLISSGTTPK MIKNEKDILPVAYGAMLAEGFVAMMALIAATSLIPADYFAINVPPQVFEKLGMHPVELQHLSQMVGENVAGRPGGGVTLA VGMTYIFEKIPWIAHLSSYIYHFIILFEALFILTTIDAGTRVGRYLLQEAGGLIYKPFADRNWWPGIIITSFLISFSWGY LVYGGSVSTIWPIFGASNQLLAGIALALGTTVIIKKGKAQHAWVTFVPFLFVSITTLYASYLNIVNNYLPKGNWVLVILS AAVMILAITIIVDSFIKWYKWLVTDKLTKEQIEASVFN >Mature_598_residues MNGLTLVIITLSVYALAYRFYGAWIGAKILAFDENRTTPAYRLENGYDYVPTNKWVLFGHHFAAIAGAGPLVGPVLAAQF GYLPGALWILIGAVLAGAVHDMVILFASVRYDGSSIIDIARKEVGKVSGIATAIAVLFILVLAMAGLALVVVNALYNSPW GTFTVAATILIAMYMGIHMKYIRKDDIVGATIIGVILLVLSVIAGPYVEKTALGHFLTFNAKQMTVILATYGFAAAVLPV WLLLVPRDYLSTYLKLGVMALLAIGVIIVNPEIRMPAITQYVAGGGPIIPGKVWPYVFITIACGAISGFHSLISSGTTPK MIKNEKDILPVAYGAMLAEGFVAMMALIAATSLIPADYFAINVPPQVFEKLGMHPVELQHLSQMVGENVAGRPGGGVTLA VGMTYIFEKIPWIAHLSSYIYHFIILFEALFILTTIDAGTRVGRYLLQEAGGLIYKPFADRNWWPGIIITSFLISFSWGY LVYGGSVSTIWPIFGASNQLLAGIALALGTTVIIKKGKAQHAWVTFVPFLFVSITTLYASYLNIVNNYLPKGNWVLVILS AAVMILAITIIVDSFIKWYKWLVTDKLTKEQIEASVFN
Specific function: Peptide Utilization During Carbon Starvation. [C]
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CstA family [H]
Homologues:
Organism=Escherichia coli, GI1786814, Length=567, Percent_Identity=46.3844797178131, Blast_Score=502, Evalue=1e-143, Organism=Escherichia coli, GI87082431, Length=584, Percent_Identity=46.2328767123288, Blast_Score=489, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003706 [H]
Pfam domain/function: PF02554 CstA [H]
EC number: NA
Molecular weight: Translated: 64863; Mature: 64863
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLTLVIITLSVYALAYRFYGAWIGAKILAFDENRTTPAYRLENGYDYVPTNKWVLFGH CCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEC HFAAIAGAGPLVGPVLAAQFGYLPGALWILIGAVLAGAVHDMVILFASVRYDGSSIIDIA HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RKEVGKVSGIATAIAVLFILVLAMAGLALVVVNALYNSPWGTFTVAATILIAMYMGIHMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YIRKDDIVGATIIGVILLVLSVIAGPYVEKTALGHFLTFNAKQMTVILATYGFAAAVLPV HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHH WLLLVPRDYLSTYLKLGVMALLAIGVIIVNPEIRMPAITQYVAGGGPIIPGKVWPYVFIT HHHHHCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHH IACGAISGFHSLISSGTTPKMIKNEKDILPVAYGAMLAEGFVAMMALIAATSLIPADYFA HHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE INVPPQVFEKLGMHPVELQHLSQMVGENVAGRPGGGVTLAVGMTYIFEKIPWIAHLSSYI ECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHH YHFIILFEALFILTTIDAGTRVGRYLLQEAGGLIYKPFADRNWWPGIIITSFLISFSWGY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC LVYGGSVSTIWPIFGASNQLLAGIALALGTTVIIKKGKAQHAWVTFVPFLFVSITTLYAS EEECCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH YLNIVNNYLPKGNWVLVILSAAVMILAITIIVDSFIKWYKWLVTDKLTKEQIEASVFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNGLTLVIITLSVYALAYRFYGAWIGAKILAFDENRTTPAYRLENGYDYVPTNKWVLFGH CCCCEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEC HFAAIAGAGPLVGPVLAAQFGYLPGALWILIGAVLAGAVHDMVILFASVRYDGSSIIDIA HHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RKEVGKVSGIATAIAVLFILVLAMAGLALVVVNALYNSPWGTFTVAATILIAMYMGIHMK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YIRKDDIVGATIIGVILLVLSVIAGPYVEKTALGHFLTFNAKQMTVILATYGFAAAVLPV HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEECCCCEEEEEEHHHHHHHHHHH WLLLVPRDYLSTYLKLGVMALLAIGVIIVNPEIRMPAITQYVAGGGPIIPGKVWPYVFIT HHHHHCHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHCCCCCCCCCCHHHHHHHH IACGAISGFHSLISSGTTPKMIKNEKDILPVAYGAMLAEGFVAMMALIAATSLIPADYFA HHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE INVPPQVFEKLGMHPVELQHLSQMVGENVAGRPGGGVTLAVGMTYIFEKIPWIAHLSSYI ECCCHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHCHHHHHHHHHH YHFIILFEALFILTTIDAGTRVGRYLLQEAGGLIYKPFADRNWWPGIIITSFLISFSWGY HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC LVYGGSVSTIWPIFGASNQLLAGIALALGTTVIIKKGKAQHAWVTFVPFLFVSITTLYAS EEECCCHHHHHHHHCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH YLNIVNNYLPKGNWVLVILSAAVMILAITIIVDSFIKWYKWLVTDKLTKEQIEASVFN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969504; 9384377 [H]