| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20807346
Identifier: 20807346
GI number: 20807346
Start: 873162
End: 874667
Strand: Direct
Name: 20807346
Synonym: TTE0865
Alternate gene names: NA
Gene position: 873162-874667 (Clockwise)
Preceding gene: 20807345
Following gene: 20807348
Centisome position: 32.47
GC content: 34.46
Gene sequence:
>1506_bases ATGTTATCAAAGAAAGAGGATGCAAGACATCAAATAGAATTTGTAAGCATAGATCAATTAGTACCACAAGACCACCTTTT AAGAAAGATAGAAAAAGTCATAGACTTTAGCTTCATATACGATTTAGTAAAAGACAAATATTCCGAGGGTCACGGCAGAC CAAGCATAGACCCAGTAGTACTCATAAAAATACTTTTCATTCAATATCTTTTTGGCATACCATCGATGAGGAGGACAATA GCAGAAATAAAAACAAATGTAGCGTATAGATGGTTTTTAGGGTATGGGCTGACAGAAGAAATACCTCATTTTTCAACATT TAGTCAGAACTACATAAGAAGATTCAAAGGGACAGACATATTTGAGAAAATATTTACGAAGATTTTAGAAGAAGCAATAA AACATGGGCTAGTAAATGCAGAGGAAGTATTCATAGATTCAACCCATGTAAAAGCAAGTGCCAACAAGAAGAAATACACC AAAGAAATAGTAGAACAAGAAGCCAGGACTTATCAAGAAAAACTAGAAGAAGAAATAAACAAAGATAGAGAAGCTCATGG CAAAAAGCCATTAAAGAAAATCAAGAAGATAAAGACGAAAGAAGTGAAAGTAAGCAAAACAGACCCAGATAGCGGAATGT TAAACAAAAACGGAAAAGAAAAAATCTTTGCATATTCTTTTCATACAGCCTGCGATAAAAATGGATTTGTATTAGGAGTA AAAGTAACAGCAGCAAATGTACACGACAGTGTGATGTTTCAAGAAGTATTAGAAGAAGTTGAAAAGAGGGTAAGAAAACC GAAAGCAATAGCAGTAGATGCAGGCTATAAAAATCCGTACATATTAAAGACAATATTTGATAGACAAATAATACCAGCAG TACCATACACAAGGCCAAAAACAAAAGATGGTTTCATGAAAAAACATGAATTTGTTTATGATGAATACTATGACTGTTAC ATATGCCCGCAGAATGAAATATTAACATATGTTACAACCAACAGAGAAGGATATAGAGAATACAAATCAAACCCAGAAAA ATGTAAAAACTGTCCTCTAAGAGAAAAGTGTACCCAAAGTAAAGACTACACAAAGAGGATATTCAGGCACATATGGGAAG GATATGTAGAAGAAGCAGAACACCTAAGGCATACACCTTACTGTAAAGAAGTATATGAGAGAAGGAAAGAGACAATAGAG AGAGTATTTGCAGATTTAAAGGAGAAGCATGGTTTGCGATGGACGACGTTAAGAGGGAAGGAAAAATTGTCCATGCAAGC GATGCTTGTTTTTGCTGCCATGAATTTAAAGAAAATGGCCTTATGGTTATGGAGGAAGGGCAAAGGGCCCTTTGACATTT CAAAACTTTATCCATTATTTGGAGTTTTAAAGAAAATTTTATCCAGATATATACAGCCCCTGCTTTCGGTACTAAGAAAA CAGGGGCTAAAATTTTGCTTTGTCAACAAACTGAGAGGGATTAGAATTTTAATCCCTCTTTTCTAA
Upstream 100 bases:
>100_bases TCCCTCTCAGACTGTTGACAAAATATCGGGAACCCGTTATTATGAGAAGGGTTCCTTGTTTTTTTAACGGTACAAAGCAA AAGAGGAGAGGAGAAGAAAG
Downstream 100 bases:
>100_bases AAGTTCTGAAACAGTGACAAATTTATATCCCTCTTCTTTTAACTTTTTTATAATTTGAGGCAGTGCAGCCAAAGTGCTAG GTTTTCCTTCGTGCATGAGT
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISBma2 Transposase; IS4 Family Transposase; Transposase Is4 Family Protein; ISPsy22 Transposase Truncated; IS5 Family Transposase N-Terminal Domain Protein; Transposase IS4 Family; ISCps6 Transposase; Transposase And Inactivated Derivative; ISSag8 Transposase; ISGsu3 Transposase; Transposase-Related Protein; Transposase Mutator Type; IS5 Family Transposase N-Terminal Domain; Phage-Associated Cell Wall Hydrolase; ISGsu2 Transposase; ISPsy6 Transposase; IS4 Transposase; Transposase For IS; Transposase For Insertion Sequence NGRIS-8b; Truncated Transposase
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MLSKKEDARHQIEFVSIDQLVPQDHLLRKIEKVIDFSFIYDLVKDKYSEGHGRPSIDPVVLIKILFIQYLFGIPSMRRTI AEIKTNVAYRWFLGYGLTEEIPHFSTFSQNYIRRFKGTDIFEKIFTKILEEAIKHGLVNAEEVFIDSTHVKASANKKKYT KEIVEQEARTYQEKLEEEINKDREAHGKKPLKKIKKIKTKEVKVSKTDPDSGMLNKNGKEKIFAYSFHTACDKNGFVLGV KVTAANVHDSVMFQEVLEEVEKRVRKPKAIAVDAGYKNPYILKTIFDRQIIPAVPYTRPKTKDGFMKKHEFVYDEYYDCY ICPQNEILTYVTTNREGYREYKSNPEKCKNCPLREKCTQSKDYTKRIFRHIWEGYVEEAEHLRHTPYCKEVYERRKETIE RVFADLKEKHGLRWTTLRGKEKLSMQAMLVFAAMNLKKMALWLWRKGKGPFDISKLYPLFGVLKKILSRYIQPLLSVLRK QGLKFCFVNKLRGIRILIPLF
Sequences:
>Translated_501_residues MLSKKEDARHQIEFVSIDQLVPQDHLLRKIEKVIDFSFIYDLVKDKYSEGHGRPSIDPVVLIKILFIQYLFGIPSMRRTI AEIKTNVAYRWFLGYGLTEEIPHFSTFSQNYIRRFKGTDIFEKIFTKILEEAIKHGLVNAEEVFIDSTHVKASANKKKYT KEIVEQEARTYQEKLEEEINKDREAHGKKPLKKIKKIKTKEVKVSKTDPDSGMLNKNGKEKIFAYSFHTACDKNGFVLGV KVTAANVHDSVMFQEVLEEVEKRVRKPKAIAVDAGYKNPYILKTIFDRQIIPAVPYTRPKTKDGFMKKHEFVYDEYYDCY ICPQNEILTYVTTNREGYREYKSNPEKCKNCPLREKCTQSKDYTKRIFRHIWEGYVEEAEHLRHTPYCKEVYERRKETIE RVFADLKEKHGLRWTTLRGKEKLSMQAMLVFAAMNLKKMALWLWRKGKGPFDISKLYPLFGVLKKILSRYIQPLLSVLRK QGLKFCFVNKLRGIRILIPLF >Mature_501_residues MLSKKEDARHQIEFVSIDQLVPQDHLLRKIEKVIDFSFIYDLVKDKYSEGHGRPSIDPVVLIKILFIQYLFGIPSMRRTI AEIKTNVAYRWFLGYGLTEEIPHFSTFSQNYIRRFKGTDIFEKIFTKILEEAIKHGLVNAEEVFIDSTHVKASANKKKYT KEIVEQEARTYQEKLEEEINKDREAHGKKPLKKIKKIKTKEVKVSKTDPDSGMLNKNGKEKIFAYSFHTACDKNGFVLGV KVTAANVHDSVMFQEVLEEVEKRVRKPKAIAVDAGYKNPYILKTIFDRQIIPAVPYTRPKTKDGFMKKHEFVYDEYYDCY ICPQNEILTYVTTNREGYREYKSNPEKCKNCPLREKCTQSKDYTKRIFRHIWEGYVEEAEHLRHTPYCKEVYERRKETIE RVFADLKEKHGLRWTTLRGKEKLSMQAMLVFAAMNLKKMALWLWRKGKGPFDISKLYPLFGVLKKILSRYIQPLLSVLRK QGLKFCFVNKLRGIRILIPLF
Specific function: Unknown
COG id: COG3666
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59033; Mature: 59033
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKKEDARHQIEFVSIDQLVPQDHLLRKIEKVIDFSFIYDLVKDKYSEGHGRPSIDPVV CCCCCCCHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LIKILFIQYLFGIPSMRRTIAEIKTNVAYRWFLGYGLTEEIPHFSTFSQNYIRRFKGTDI HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHCCCHHCCCCHHHHHHHHHHHHCCCHH FEKIFTKILEEAIKHGLVNAEEVFIDSTHVKASANKKKYTKEIVEQEARTYQEKLEEEIN HHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC KDREAHGKKPLKKIKKIKTKEVKVSKTDPDSGMLNKNGKEKIFAYSFHTACDKNGFVLGV CHHHHCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEE KVTAANVHDSVMFQEVLEEVEKRVRKPKAIAVDAGYKNPYILKTIFDRQIIPAVPYTRPK EEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHCCCCCCCCCCCCCC TKDGFMKKHEFVYDEYYDCYICPQNEILTYVTTNREGYREYKSNPEKCKNCPLREKCTQS CCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHCCCCHHHHCCCCHHHHCCC KDYTKRIFRHIWEGYVEEAEHLRHTPYCKEVYERRKETIERVFADLKEKHGLRWTTLRGK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC EKLSMQAMLVFAAMNLKKMALWLWRKGKGPFDISKLYPLFGVLKKILSRYIQPLLSVLRK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLKFCFVNKLRGIRILIPLF CCCCEEHHHHCCCCEEEEECC >Mature Secondary Structure MLSKKEDARHQIEFVSIDQLVPQDHLLRKIEKVIDFSFIYDLVKDKYSEGHGRPSIDPVV CCCCCCCHHHHHHEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LIKILFIQYLFGIPSMRRTIAEIKTNVAYRWFLGYGLTEEIPHFSTFSQNYIRRFKGTDI HHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEHHHCCCHHCCCCHHHHHHHHHHHHCCCHH FEKIFTKILEEAIKHGLVNAEEVFIDSTHVKASANKKKYTKEIVEQEARTYQEKLEEEIN HHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC KDREAHGKKPLKKIKKIKTKEVKVSKTDPDSGMLNKNGKEKIFAYSFHTACDKNGFVLGV CHHHHCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCEEEEEEHHHCCCCCEEEEE KVTAANVHDSVMFQEVLEEVEKRVRKPKAIAVDAGYKNPYILKTIFDRQIIPAVPYTRPK EEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHCCCCCCCCCCCCCC TKDGFMKKHEFVYDEYYDCYICPQNEILTYVTTNREGYREYKSNPEKCKNCPLREKCTQS CCCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCCHHHHHHCCCCHHHHCCCCHHHHCCC KDYTKRIFRHIWEGYVEEAEHLRHTPYCKEVYERRKETIERVFADLKEKHGLRWTTLRGK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC EKLSMQAMLVFAAMNLKKMALWLWRKGKGPFDISKLYPLFGVLKKILSRYIQPLLSVLRK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QGLKFCFVNKLRGIRILIPLF CCCCEEHHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA