| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is PspC [C]
Identifier: 20807345
GI number: 20807345
Start: 872646
End: 873053
Strand: Direct
Name: PspC [C]
Synonym: TTE0864
Alternate gene names: 20807345
Gene position: 872646-873053 (Clockwise)
Preceding gene: 20807344
Following gene: 20807346
Centisome position: 32.45
GC content: 38.73
Gene sequence:
>408_bases ATGAGTAAAAGGCTTTACAGGTCGAGGGAGCAGAGGATTTTTGGAGGAGTTTGTGGAGGCATTGCTGAATATTTTAATGT AGATGTGACTTTAGTAAGGCTTATATGCCTTGTCACAGTGATTTTTGGCGGAGGAGGGCTTCTCTTTTACTTGATAGCGT GGATTATAATTCCTGAAAATCCCTATCAGACAGGGAAGGCAGTGGATAAAACGAAAAATGAGATGGGCGAAGTAGGAAGT GAAAAAGAGATTAAAGATAATAGAGCGAATGAAGTGTTGGGATGGGGATTGATAATTTTAGGCCTTTTGATTTTGCTGCC GAAATTATTTCCATTTGTGAGCTTTAGAATGCTGTGGCCAATAGTCTTAATTGGACTTGGTATATGGATATTATTAAAGA GGGATTAG
Upstream 100 bases:
>100_bases GCTATTTTGCTGGCAATTTTAATGTTATTTTTTACTAGCGAAATTTTTTATTTACCGCCTTTTGATTTAAGAATATGGTA GCAGATTGGAGGAAATGTGA
Downstream 100 bases:
>100_bases AATTTTAATCCCTCTCAGACTGTTGACAAAATATCGGGAACCCGTTATTATGAGAAGGGTTCCTTGTTTTTTTAACGGTA CAAAGCAAAAGAGGAGAGGA
Product: putative stress-responsive transcriptional regulator
Products: NA
Alternate protein names: Stress-Responsive Transcriptional Regulator
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKRLYRSREQRIFGGVCGGIAEYFNVDVTLVRLICLVTVIFGGGGLLFYLIAWIIIPENPYQTGKAVDKTKNEMGEVGS EKEIKDNRANEVLGWGLIILGLLILLPKLFPFVSFRMLWPIVLIGLGIWILLKRD
Sequences:
>Translated_135_residues MSKRLYRSREQRIFGGVCGGIAEYFNVDVTLVRLICLVTVIFGGGGLLFYLIAWIIIPENPYQTGKAVDKTKNEMGEVGS EKEIKDNRANEVLGWGLIILGLLILLPKLFPFVSFRMLWPIVLIGLGIWILLKRD >Mature_134_residues SKRLYRSREQRIFGGVCGGIAEYFNVDVTLVRLICLVTVIFGGGGLLFYLIAWIIIPENPYQTGKAVDKTKNEMGEVGSE KEIKDNRANEVLGWGLIILGLLILLPKLFPFVSFRMLWPIVLIGLGIWILLKRD
Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]
COG id: COG1983
COG function: function code KT; Putative stress-responsive transcriptional regulator
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15241; Mature: 15109
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRLYRSREQRIFGGVCGGIAEYFNVDVTLVRLICLVTVIFGGGGLLFYLIAWIIIPEN CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PYQTGKAVDKTKNEMGEVGSEKEIKDNRANEVLGWGLIILGLLILLPKLFPFVSFRMLWP CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVLIGLGIWILLKRD HHHHHHHHHHHEECC >Mature Secondary Structure SKRLYRSREQRIFGGVCGGIAEYFNVDVTLVRLICLVTVIFGGGGLLFYLIAWIIIPEN CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PYQTGKAVDKTKNEMGEVGSEKEIKDNRANEVLGWGLIILGLLILLPKLFPFVSFRMLWP CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVLIGLGIWILLKRD HHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA