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The map label for this gene is GlpG

Identifier: 20806909

GI number: 20806909

Start: 418788

End: 419471

Strand: Reverse

Name: GlpG

Synonym: TTE0400

Alternate gene names: NA

Gene position: 419471-418788 (Counterclockwise)

Preceding gene: 20806910

Following gene: 20806901

Centisome position: 15.6

GC content: 43.27

Gene sequence:

>684_bases
ATGTTTCCAATCAGGGATAATATACCAAGCAGAAGACCACCCGTTATTACGCTCTCGCTCATAATAATAAATTCGCTCAT
ATTTTTCACTCTTTCAAGTGCTTCATACAGCACTTTTGCCGAGTTTGTTTACAAATACGGGCTTATACCGGCAAAAATTA
CAAAACTGATTATATCCGGTGTACCGCTTTCCGGCAGCAACTTATACCCTTTTATCACCAGTATGTTTCTTCACGGTAAC
ACATTTCACCTAATTAGCAACATGTGGATACTCTGGCTGTTCGGAGATAATGTTGAAGATAGGATGGGCCATATAAGATT
CCTCATTTTCTACCTCCTTAGTGGGGTAATCGCAGGTGTATTTCACCTGGTTTTTAATCCCATCTCACCAGTGCCGGTGG
TAGGGGCTTCTGGAGCTATTGCAGGCATTATGGGTGCATATTTCGTATTATTCCCGTCGGCAAGGATAATTACGCTGGTA
CCAAGCTTTTTCCTGGTTCCAGTCTTCCTTCCGATACCAGCCGTGGTCTACCTCTTCCTATGGTTCCTGACACAGCTCTA
TTCCGGCATGGTCTATTCTGTCATTGGTGGTACAACGGTTGGTGGAATAGCCTGGTGGGCGCATATAGGAGGATTTATCA
GTGGTGTGTTGTTAAATAGGTTCTTCCTTAGAGATAGGTATTAA

Upstream 100 bases:

>100_bases
TTTTTCAGAATTACTTGTGCTATAATCTTAATATAATTTTGATTTGATACGGAACTCGGTTTTCCTGCAAAGGTAGAATA
AAAAAAGTGGAGGGTTAAAG

Downstream 100 bases:

>100_bases
TTAACTCGTGCTCACAATGGCGATTTCTCCACAGTCCCAAGGAAGCTAATATGTACCCAATAATCCATTTTTTCTGGCAT
ATCTACTACTCATGCCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; S54 Family Peptidase; Peptidase Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Transmembrane Rhomboid Family Protein; Integral Membrane Rhomboid Family Protein; Subfamily; Rhomboid Serine Protease; Regulatory Proteins IclR

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MFPIRDNIPSRRPPVITLSLIIINSLIFFTLSSASYSTFAEFVYKYGLIPAKITKLIISGVPLSGSNLYPFITSMFLHGN
TFHLISNMWILWLFGDNVEDRMGHIRFLIFYLLSGVIAGVFHLVFNPISPVPVVGASGAIAGIMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGMVYSVIGGTTVGGIAWWAHIGGFISGVLLNRFFLRDRY

Sequences:

>Translated_227_residues
MFPIRDNIPSRRPPVITLSLIIINSLIFFTLSSASYSTFAEFVYKYGLIPAKITKLIISGVPLSGSNLYPFITSMFLHGN
TFHLISNMWILWLFGDNVEDRMGHIRFLIFYLLSGVIAGVFHLVFNPISPVPVVGASGAIAGIMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGMVYSVIGGTTVGGIAWWAHIGGFISGVLLNRFFLRDRY
>Mature_227_residues
MFPIRDNIPSRRPPVITLSLIIINSLIFFTLSSASYSTFAEFVYKYGLIPAKITKLIISGVPLSGSNLYPFITSMFLHGN
TFHLISNMWILWLFGDNVEDRMGHIRFLIFYLLSGVIAGVFHLVFNPISPVPVVGASGAIAGIMGAYFVLFPSARIITLV
PSFFLVPVFLPIPAVVYLFLWFLTQLYSGMVYSVIGGTTVGGIAWWAHIGGFISGVLLNRFFLRDRY

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25285; Mature: 25285

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIRDNIPSRRPPVITLSLIIINSLIFFTLSSASYSTFAEFVYKYGLIPAKITKLIISG
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPLSGSNLYPFITSMFLHGNTFHLISNMWILWLFGDNVEDRMGHIRFLIFYLLSGVIAGV
CCCCCCCHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHLVFNPISPVPVVGASGAIAGIMGAYFVLFPSARIITLVPSFFLVPVFLPIPAVVYLFL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQLYSGMVYSVIGGTTVGGIAWWAHIGGFISGVLLNRFFLRDRY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPIRDNIPSRRPPVITLSLIIINSLIFFTLSSASYSTFAEFVYKYGLIPAKITKLIISG
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHC
VPLSGSNLYPFITSMFLHGNTFHLISNMWILWLFGDNVEDRMGHIRFLIFYLLSGVIAGV
CCCCCCCHHHHHHHHHHCCCHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHLVFNPISPVPVVGASGAIAGIMGAYFVLFPSARIITLVPSFFLVPVFLPIPAVVYLFL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WFLTQLYSGMVYSVIGGTTVGGIAWWAHIGGFISGVLLNRFFLRDRY
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA