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The map label for this gene is ydjC [C]

Identifier: 20806851

GI number: 20806851

Start: 354828

End: 355577

Strand: Direct

Name: ydjC [C]

Synonym: TTE0334

Alternate gene names: 20806851

Gene position: 354828-355577 (Clockwise)

Preceding gene: 20806850

Following gene: 20806852

Centisome position: 13.19

GC content: 30.13

Gene sequence:

>750_bases
GTGAAGTATCTTATTGTAAATGGAGATGATTTTGGTCTTACAAAAGGTGTAAATAAGGGGATTGTTGAAAGCTACAAAAA
TGGCATTTTAAGAAGTACTTCTATAATGTGTAACATGCCTTATGCTGATGAGGCTTCTCAAATAAAAGAGATATGTCCTG
ATTTGGGATTTGGGATACACATTACATTAGATGCTGGTAAACCTTTGAATAGTCCTTATAAGGTAAGTACCCTAGTGGAT
GAAAAAGGATATTTTAAAAAAGGTTTTTCCCATTCTTTAAATGAAGCAGATATTGATCAGATAAAAATAGAGATAGAGGA
GCAAATTAAAAAGGCATTTTCTTTAGGGGTTCCTATAACCCATATGGATAGCCATCATGGTGTGCAAAGTCACCCTAAAG
TGATAGAAATATTTATAGATATGGCTATAAAGTATAATTTGCCTGTACGTGCAACTCCCTTGGATAAAGAAGTTATATTA
AAATCAGGTGTGAAAACAATTGATAATTTTGTTTATACCTTTTATGATGAAGGAGTAGAAAAGGAAAATCTTTTGTTTAT
TTTAAAAAAACTAGAGAATGGAATAACAGAAATAATGACTCACCCTGCTTATGTAGATGATGAATTAATGAGAGTTTCTT
CTTATAATACTAAAAGAGAAATAGAAAGAAAAATATTAACCGATCCAGATGTGATTCAATTTGTTAAAGAAAATAATATA
ACACTAGTAAATTACTCAATTTTCAGGTAA

Upstream 100 bases:

>100_bases
TTAAGAGAAAATAAAAGATAATAGAGGGAAGGCGTAAATATAATACCATATCCTGGAGAGAATTTCCTCCAGGATATGGA
TCCTTAAAGGAGTGAGGAAA

Downstream 100 bases:

>100_bases
TTTGTAAAATTTTATAAGGAGGGGAATATATCATGAGAATTTTGTTAATTTGTGGCGCAGGAATGTCAACAAGTTTGTTA
GTAGAAAAGATGAAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKYLIVNGDDFGLTKGVNKGIVESYKNGILRSTSIMCNMPYADEASQIKEICPDLGFGIHITLDAGKPLNSPYKVSTLVD
EKGYFKKGFSHSLNEADIDQIKIEIEEQIKKAFSLGVPITHMDSHHGVQSHPKVIEIFIDMAIKYNLPVRATPLDKEVIL
KSGVKTIDNFVYTFYDEGVEKENLLFILKKLENGITEIMTHPAYVDDELMRVSSYNTKREIERKILTDPDVIQFVKENNI
TLVNYSIFR

Sequences:

>Translated_249_residues
MKYLIVNGDDFGLTKGVNKGIVESYKNGILRSTSIMCNMPYADEASQIKEICPDLGFGIHITLDAGKPLNSPYKVSTLVD
EKGYFKKGFSHSLNEADIDQIKIEIEEQIKKAFSLGVPITHMDSHHGVQSHPKVIEIFIDMAIKYNLPVRATPLDKEVIL
KSGVKTIDNFVYTFYDEGVEKENLLFILKKLENGITEIMTHPAYVDDELMRVSSYNTKREIERKILTDPDVIQFVKENNI
TLVNYSIFR
>Mature_249_residues
MKYLIVNGDDFGLTKGVNKGIVESYKNGILRSTSIMCNMPYADEASQIKEICPDLGFGIHITLDAGKPLNSPYKVSTLVD
EKGYFKKGFSHSLNEADIDQIKIEIEEQIKKAFSLGVPITHMDSHHGVQSHPKVIEIFIDMAIKYNLPVRATPLDKEVIL
KSGVKTIDNFVYTFYDEGVEKENLLFILKKLENGITEIMTHPAYVDDELMRVSSYNTKREIERKILTDPDVIQFVKENNI
TLVNYSIFR

Specific function: Unknown

COG id: COG3394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0249 family

Homologues:

Organism=Homo sapiens, GI63054868, Length=289, Percent_Identity=23.1833910034602, Blast_Score=75, Evalue=4e-14,
Organism=Escherichia coli, GI1788028, Length=253, Percent_Identity=31.2252964426877, Blast_Score=111, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y334_THETN (Q8RCS8)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622022.1
- ProteinModelPortal:   Q8RCS8
- SMR:   Q8RCS8
- GeneID:   996298
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0334
- NMPDR:   fig|273068.3.peg.147
- HOGENOM:   HBG716502
- OMA:   AVRPFSD
- ProtClustDB:   CLSK900731
- BioCyc:   TTEN273068:TTE0334-MONOMER
- HAMAP:   MF_01246
- InterPro:   IPR002509
- InterPro:   IPR006879
- InterPro:   IPR022948
- Gene3D:   G3DSA:3.20.20.370

Pfam domain/function: PF04794 YdjC

EC number: NA

Molecular weight: Translated: 28297; Mature: 28297

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLIVNGDDFGLTKGVNKGIVESYKNGILRSTSIMCNMPYADEASQIKEICPDLGFGIH
CEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECEEEEECCCCCCHHHHHHHHHCCCCCEE
ITLDAGKPLNSPYKVSTLVDEKGYFKKGFSHSLNEADIDQIKIEIEEQIKKAFSLGVPIT
EEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCHHHHEEHHHHHHHHHHHCCCCEE
HMDSHHGVQSHPKVIEIFIDMAIKYNLPVRATPLDKEVILKSGVKTIDNFVYTFYDEGVE
ECCCCCCCCCCCHHEEHEEEHHEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KENLLFILKKLENGITEIMTHPAYVDDELMRVSSYNTKREIERKILTDPDVIQFVKENNI
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCE
TLVNYSIFR
EEEEEEECC
>Mature Secondary Structure
MKYLIVNGDDFGLTKGVNKGIVESYKNGILRSTSIMCNMPYADEASQIKEICPDLGFGIH
CEEEEECCCCCCCCCCCCHHHHHHHHCCCEEECEEEEECCCCCCHHHHHHHHHCCCCCEE
ITLDAGKPLNSPYKVSTLVDEKGYFKKGFSHSLNEADIDQIKIEIEEQIKKAFSLGVPIT
EEEECCCCCCCCEEEEEEECCCCHHHCCCCCCCCCCCHHHHEEHHHHHHHHHHHCCCCEE
HMDSHHGVQSHPKVIEIFIDMAIKYNLPVRATPLDKEVILKSGVKTIDNFVYTFYDEGVE
ECCCCCCCCCCCHHEEHEEEHHEEECCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
KENLLFILKKLENGITEIMTHPAYVDDELMRVSSYNTKREIERKILTDPDVIQFVKENNI
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCE
TLVNYSIFR
EEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336