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The map label for this gene is yhaM [C]

Identifier: 20806790

GI number: 20806790

Start: 282590

End: 283861

Strand: Direct

Name: yhaM [C]

Synonym: TTE0269

Alternate gene names: 20806790

Gene position: 282590-283861 (Clockwise)

Preceding gene: 20806787

Following gene: 20806794

Centisome position: 10.51

GC content: 40.02

Gene sequence:

>1272_bases
ATGAGAAAAGACCTTTTAATATTAACAGATATTTTAAAGGCAAATGTGGCGCCTGCTCTGGGCTGTACAGAGCCTGGAGC
TGTAGCTTATGCTGTCTCAAAAGCTAGAGAAATTTTAGGGGAAGAGCCACGGGAAGTATATGTAGCAGTAGATAGGGATA
TTTTAAAAAATGGAATGTTTGTTTCTATTCCTGGCACAAAGGAAAAAGGCCTTGTGTTTGCTGCTGCACTGGCTCTTGTT
TGTGGGAAATCTGAGTATAAGCTGGAGGCTTTAAGAGAAGCAACAGAAGAAGATATTAAAAAGGCTCACAAAATAGTAAA
TAGAAAAGCTGTAAAGATTGTTCTTGAAAAAGATGCAGAAGGACTTTATATAAAAGCTTCTGTCGTAGGGGATAAACACA
GAGCCACTGTTATAGTAAAAGATGCTCATGACAACATTGTATATGAAGAAAGAGATGGAGTTGTGCTAAAAGCAAAAGAG
GAGAATTTAAAGGAGGACAAGTCTTGGCTTAAAGCGAAAATTAAAGAATTCACAATAGAGGATTTTCTGGATTACTGCGA
CAGTGTGGATTTTAAAGAGATTGAATTTATAGGCGAAGGAATAGAAATGAACAAAAAGATAGCTTACGCAGGGCTGAATG
AAGAGGTAGGGGTAGGCATTGGAAAGATGTTAAAAAGACAGATAAGGGATGAAGAATCTTTGGCAAAAGCTTTAACAGCA
GCCGCTTCAGAGGCGAGAATGTCTGGATATCCACTTCCGGTTATGAGCAGTGCAGGTTCTGGAAATCACGGGCTTGTGGC
AATACTGCCCATTGCGATCATAGGGGAAGAAAGAGGTTATGACAGGGAAAAGATTATAAGAGCTATAACGTTAAGCCATC
TTTTAACTGCCTATGTTAAAGCTTATATAGGTGTTTTGTCTCCTATATGTGGCTGTGGAGTTGCAGCAGGTGTGGGGATG
AGCGCAGGGCTAACTTATCTATTGGGAGGTAGTAGGAAACAGATAAAAGGAGCAGTCAGCAACATGCTGGCGGGGCTTTC
TGGGATGATATGCGATGGTGCCAAGATTGGATGCGCGTACAAACTTTCTATTTCGGTCACAGCGGCATTAGAAGCGTCAA
AATTCGCCATGGAAAATATATTCATACCTTCTGACAACGGAATTTTGGGAAATACGGCAGAAGAAAGCATAAAGAATTTG
GGCAGGATTTCTGTTGAAGGCATGAAAAACGCAGATGATGTAATTCTGGATATAATGTTAAAAAAACAATAA

Upstream 100 bases:

>100_bases
AGAAATATGCTTTTTCAAAGGTTTATTTTCGGGTGAATATTTGTGGCATAAAAATTGCGTAATAAAAATGCGGGTAAATA
AAACTTTTGGAGTGATTAGT

Downstream 100 bases:

>100_bases
AAGCGGGCTTGAAGATTTCAAGCCCGCTTTGTTGAAAAAAAGGGATATTTTATGGGTGACCTTATTTCAAAGGTTTGTGT
ACGAACCACCAGTCAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRKDLLILTDILKANVAPALGCTEPGAVAYAVSKAREILGEEPREVYVAVDRDILKNGMFVSIPGTKEKGLVFAAALALV
CGKSEYKLEALREATEEDIKKAHKIVNRKAVKIVLEKDAEGLYIKASVVGDKHRATVIVKDAHDNIVYEERDGVVLKAKE
ENLKEDKSWLKAKIKEFTIEDFLDYCDSVDFKEIEFIGEGIEMNKKIAYAGLNEEVGVGIGKMLKRQIRDEESLAKALTA
AASEARMSGYPLPVMSSAGSGNHGLVAILPIAIIGEERGYDREKIIRAITLSHLLTAYVKAYIGVLSPICGCGVAAGVGM
SAGLTYLLGGSRKQIKGAVSNMLAGLSGMICDGAKIGCAYKLSISVTAALEASKFAMENIFIPSDNGILGNTAEESIKNL
GRISVEGMKNADDVILDIMLKKQ

Sequences:

>Translated_423_residues
MRKDLLILTDILKANVAPALGCTEPGAVAYAVSKAREILGEEPREVYVAVDRDILKNGMFVSIPGTKEKGLVFAAALALV
CGKSEYKLEALREATEEDIKKAHKIVNRKAVKIVLEKDAEGLYIKASVVGDKHRATVIVKDAHDNIVYEERDGVVLKAKE
ENLKEDKSWLKAKIKEFTIEDFLDYCDSVDFKEIEFIGEGIEMNKKIAYAGLNEEVGVGIGKMLKRQIRDEESLAKALTA
AASEARMSGYPLPVMSSAGSGNHGLVAILPIAIIGEERGYDREKIIRAITLSHLLTAYVKAYIGVLSPICGCGVAAGVGM
SAGLTYLLGGSRKQIKGAVSNMLAGLSGMICDGAKIGCAYKLSISVTAALEASKFAMENIFIPSDNGILGNTAEESIKNL
GRISVEGMKNADDVILDIMLKKQ
>Mature_423_residues
MRKDLLILTDILKANVAPALGCTEPGAVAYAVSKAREILGEEPREVYVAVDRDILKNGMFVSIPGTKEKGLVFAAALALV
CGKSEYKLEALREATEEDIKKAHKIVNRKAVKIVLEKDAEGLYIKASVVGDKHRATVIVKDAHDNIVYEERDGVVLKAKE
ENLKEDKSWLKAKIKEFTIEDFLDYCDSVDFKEIEFIGEGIEMNKKIAYAGLNEEVGVGIGKMLKRQIRDEESLAKALTA
AASEARMSGYPLPVMSSAGSGNHGLVAILPIAIIGEERGYDREKIIRAITLSHLLTAYVKAYIGVLSPICGCGVAAGVGM
SAGLTYLLGGSRKQIKGAVSNMLAGLSGMICDGAKIGCAYKLSISVTAALEASKFAMENIFIPSDNGILGNTAEESIKNL
GRISVEGMKNADDVILDIMLKKQ

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family

Homologues:

Organism=Escherichia coli, GI48994923, Length=415, Percent_Identity=34.2168674698795, Blast_Score=212, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y269_THETN (Q8RCY6)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_621961.1
- GeneID:   997019
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0269
- NMPDR:   fig|273068.3.peg.1132
- HOGENOM:   HBG296671
- OMA:   LSGMICD
- ProtClustDB:   CLSK812152
- BioCyc:   TTEN273068:TTE0269-MONOMER
- HAMAP:   MF_01845
- InterPro:   IPR005130
- InterPro:   IPR021144
- PIRSF:   PIRSF006054

Pfam domain/function: PF03313 SDH_alpha

EC number: NA

Molecular weight: Translated: 45528; Mature: 45528

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKDLLILTDILKANVAPALGCTEPGAVAYAVSKAREILGEEPREVYVAVDRDILKNGMF
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCE
VSIPGTKEKGLVFAAALALVCGKSEYKLEALREATEEDIKKAHKIVNRKAVKIVLEKDAE
EEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
GLYIKASVVGDKHRATVIVKDAHDNIVYEERDGVVLKAKEENLKEDKSWLKAKIKEFTIE
CEEEEEEEECCCCCEEEEEEECCCCCEEECCCCEEEEECHHCHHHHHHHHHHHHHHHHHH
DFLDYCDSVDFKEIEFIGEGIEMNKKIAYAGLNEEVGVGIGKMLKRQIRDEESLAKALTA
HHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCHHCCCHHHHHHHHHCCHHHHHHHHHH
AASEARMSGYPLPVMSSAGSGNHGLVAILPIAIIGEERGYDREKIIRAITLSHLLTAYVK
HHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AYIGVLSPICGCGVAAGVGMSAGLTYLLGGSRKQIKGAVSNMLAGLSGMICDGAKIGCAY
HHHHHHHHHHHHHHHHCCCHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEECCCEECEEE
KLSISVTAALEASKFAMENIFIPSDNGILGNTAEESIKNLGRISVEGMKNADDVILDIML
EEEEEEEEEHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHEEEEEE
KKQ
CCC
>Mature Secondary Structure
MRKDLLILTDILKANVAPALGCTEPGAVAYAVSKAREILGEEPREVYVAVDRDILKNGMF
CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCE
VSIPGTKEKGLVFAAALALVCGKSEYKLEALREATEEDIKKAHKIVNRKAVKIVLEKDAE
EEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC
GLYIKASVVGDKHRATVIVKDAHDNIVYEERDGVVLKAKEENLKEDKSWLKAKIKEFTIE
CEEEEEEEECCCCCEEEEEEECCCCCEEECCCCEEEEECHHCHHHHHHHHHHHHHHHHHH
DFLDYCDSVDFKEIEFIGEGIEMNKKIAYAGLNEEVGVGIGKMLKRQIRDEESLAKALTA
HHHHHHCCCCCHHHHHHCCCCCCCCEEEEECCCCHHCCCHHHHHHHHHCCHHHHHHHHHH
AASEARMSGYPLPVMSSAGSGNHGLVAILPIAIIGEERGYDREKIIRAITLSHLLTAYVK
HHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
AYIGVLSPICGCGVAAGVGMSAGLTYLLGGSRKQIKGAVSNMLAGLSGMICDGAKIGCAY
HHHHHHHHHHHHHHHHCCCHHCCCCEEECCCHHHHHHHHHHHHHHHCCEEECCCEECEEE
KLSISVTAALEASKFAMENIFIPSDNGILGNTAEESIKNLGRISVEGMKNADDVILDIML
EEEEEEEEEHHHHHHHHHHEEECCCCCCCCCCHHHHHHHCCCEEECCCCCCHHHEEEEEE
KKQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11997336