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The map label for this gene is TrkA [H]

Identifier: 20806723

GI number: 20806723

Start: 204137

End: 204790

Strand: Direct

Name: TrkA [H]

Synonym: TTE0197

Alternate gene names: 20806723

Gene position: 204137-204790 (Clockwise)

Preceding gene: 20806722

Following gene: 20806724

Centisome position: 7.59

GC content: 35.47

Gene sequence:

>654_bases
ATGAAACAATTTGTTGTTATTGGGTTAGGAAGCTTTGGCATAAGTTTGGCCAAAACTTTATATGAAATGGGCAATGACGT
ACTGGTTATAGATAAAGATGAAGAGTTGGTACAATCTATGGCTGGTTTGGTAACTCATGCAGTGCGGGCTGATGCTACTG
ATGAAAATGTACTTAAGTCACTTGGTGTGAAAAATTTTGATGTGGCCATAGTCGCTATAGGAAAGAATATGGAATCAAGT
ATTATGATAACAATGTTGGTCAAAGAGATGGGAGTAAAATATGTAATAGCAAAAGCTCACAATGAATTACATGCAAGAGT
TCTTTACAAAGTGGGAGCAGATAGAGTGGTGATGCCTGAAAAAGATATGGGTATAAGGGTTGCCAGGAATATTTTTTCAA
GCAATTTATTGGATCTTATTGAGTTTTCTAAAGATTACAGCATAGCAGAAATTCTCCCAATTGAAGAGTGGTTTCATAAG
ACATTAAAGGAGATAAGGATGAGGGAAAGATACGGATTAAATGTCATAGCTGCAAAAAAGATGAATAATGAGATTATTGT
GTCACCGGGGCCAGATTATGTGGTTGATGAAGGTGATATATTGGCTGTTTGCGGCAAAAATATAGATATTAAGAAATTCG
AGATAAAAATGTAG

Upstream 100 bases:

>100_bases
AACATTGGCGTTAGCATTGGCACAAAGGCAGAAGAAACCTAAACCTATTATGAAGTATGTGGAAGAAAAAATTATGGTAG
GTTAAAATAGAGGTGGAACG

Downstream 100 bases:

>100_bases
ATTATAAGAAAGCAAGAAAAATAAAGCCATTGGAGATTTATATAACATTTCATTATATCAGTAGGTGCCAAAATGTTATG
AATCTATGGATGTAACTGGA

Product: K+ transport systems, NAD-binding component

Products: NA

Alternate protein names: K(+)-uptake protein ktrC; ORF4 [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKQFVVIGLGSFGISLAKTLYEMGNDVLVIDKDEELVQSMAGLVTHAVRADATDENVLKSLGVKNFDVAIVAIGKNMESS
IMITMLVKEMGVKYVIAKAHNELHARVLYKVGADRVVMPEKDMGIRVARNIFSSNLLDLIEFSKDYSIAEILPIEEWFHK
TLKEIRMRERYGLNVIAAKKMNNEIIVSPGPDYVVDEGDILAVCGKNIDIKKFEIKM

Sequences:

>Translated_217_residues
MKQFVVIGLGSFGISLAKTLYEMGNDVLVIDKDEELVQSMAGLVTHAVRADATDENVLKSLGVKNFDVAIVAIGKNMESS
IMITMLVKEMGVKYVIAKAHNELHARVLYKVGADRVVMPEKDMGIRVARNIFSSNLLDLIEFSKDYSIAEILPIEEWFHK
TLKEIRMRERYGLNVIAAKKMNNEIIVSPGPDYVVDEGDILAVCGKNIDIKKFEIKM
>Mature_217_residues
MKQFVVIGLGSFGISLAKTLYEMGNDVLVIDKDEELVQSMAGLVTHAVRADATDENVLKSLGVKNFDVAIVAIGKNMESS
IMITMLVKEMGVKYVIAKAHNELHARVLYKVGADRVVMPEKDMGIRVARNIFSSNLLDLIEFSKDYSIAEILPIEEWFHK
TLKEIRMRERYGLNVIAAKKMNNEIIVSPGPDYVVDEGDILAVCGKNIDIKKFEIKM

Specific function: Catalytic subunit of the KtrCD potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24264; Mature: 24264

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFVVIGLGSFGISLAKTLYEMGNDVLVIDKDEELVQSMAGLVTHAVRADATDENVLKS
CCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGVKNFDVAIVAIGKNMESSIMITMLVKEMGVKYVIAKAHNELHARVLYKVGADRVVMPE
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCEEECCC
KDMGIRVARNIFSSNLLDLIEFSKDYSIAEILPIEEWFHKTLKEIRMRERYGLNVIAAKK
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECHHHHHHHHHHHHHHHHHCCCEEEEEEC
MNNEIIVSPGPDYVVDEGDILAVCGKNIDIKKFEIKM
CCCEEEEECCCCEEECCCCEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKQFVVIGLGSFGISLAKTLYEMGNDVLVIDKDEELVQSMAGLVTHAVRADATDENVLKS
CCEEEEEEECHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LGVKNFDVAIVAIGKNMESSIMITMLVKEMGVKYVIAKAHNELHARVLYKVGADRVVMPE
CCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCEEECCC
KDMGIRVARNIFSSNLLDLIEFSKDYSIAEILPIEEWFHKTLKEIRMRERYGLNVIAAKK
CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHEECHHHHHHHHHHHHHHHHHCCCEEEEEEC
MNNEIIVSPGPDYVVDEGDILAVCGKNIDIKKFEIKM
CCCEEEEECCCCEEECCCCEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969500; 9384377 [H]