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The map label for this gene is rsmI [H]

Identifier: 20806633

GI number: 20806633

Start: 106400

End: 107227

Strand: Direct

Name: rsmI [H]

Synonym: TTE0104

Alternate gene names: 20806633

Gene position: 106400-107227 (Clockwise)

Preceding gene: 20806632

Following gene: 20806634

Centisome position: 3.96

GC content: 38.29

Gene sequence:

>828_bases
ATGGAAGAGTATGGGACATTGTATTTGTGCCCCACACCTATTGGCAATTTGGAAGATATAACTCTTAGGGTTTTGAGGGT
TTTAAGTGAGGTGGACCTTATTGCAGCAGAAGATACCAGACAGACACTGAAGTTGTTAAATCACTACGAAATAAAAAAAT
CCCTTGTAAGTTACCATGAACATAATAAAGTAACGATGGGACCCAAGCTAATAGAAAAATTGAAAAGTGGAAAATCTATT
GCACTGGTGACTGATGCGGGTACCCCTTCGATTTCAGATCCCGGGGAAGAATTAGTTAGGCTCTGCATACAGGAAGGCAT
AAAGATAGTGCCTCTTCCAGGGCCAACAGCAGCCATCACAGCGCTTATTGCCTCAGGACTTGATGCTTCTTCTTTTGTAT
TTGAAGGTTTTCTGCCAAAGAAAAGCAAAGAGAGAAGGGAAAAACTAGAGAGGATTTCAAGAGAAGAGAGGACTACAATA
CTTTATGAATCTCCTCACCGATTGAAAGAAACTTTAAAGGAACTAAAAGAATACATAGGGGAAAGAAAAGTTGTGGTGGC
AAGGGAGCTTACTAAAATTCACGAAGAGTTTATAAGAGGGACGGTAGAAGAAGTTTTAGAAAAGTTAGGAGAGGAAGTAA
AGGGAGAGATTGTGATAGTAATAGAAGGAGCTAAAATTAGTCCTTTACAAAAAGACCCTAAAGAATTGCTAGATAAATAC
CTAAAACTAGGGATGGATAAAAAAGAAGCTGTGAAAAAGGTTGCAGAAGAGCTGAAGGTTTCAAAAAGAGAAGTTTATAA
GCTTGTCATAGATGAAGATATCAATTGA

Upstream 100 bases:

>100_bases
TGACTGTACTTCCGCCCCTTTATGTGTATGAAAGGACTGGTGAGTATACAGAAGAGGTGAAATCCATATATTCAAAGGAA
AGTTTGGAGGAGGAATAAAA

Downstream 100 bases:

>100_bases
AGTTGATTTTCAATACCTTTTGTGTAAAATATTTGCATATTTTTGGCCCATGAACTATAATATATATAAGTGACAATTTC
AATTGATAATGTGTGGAGGT

Product: methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEEYGTLYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLLNHYEIKKSLVSYHEHNKVTMGPKLIEKLKSGKSI
ALVTDAGTPSISDPGEELVRLCIQEGIKIVPLPGPTAAITALIASGLDASSFVFEGFLPKKSKERREKLERISREERTTI
LYESPHRLKETLKELKEYIGERKVVVARELTKIHEEFIRGTVEEVLEKLGEEVKGEIVIVIEGAKISPLQKDPKELLDKY
LKLGMDKKEAVKKVAEELKVSKREVYKLVIDEDIN

Sequences:

>Translated_275_residues
MEEYGTLYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLLNHYEIKKSLVSYHEHNKVTMGPKLIEKLKSGKSI
ALVTDAGTPSISDPGEELVRLCIQEGIKIVPLPGPTAAITALIASGLDASSFVFEGFLPKKSKERREKLERISREERTTI
LYESPHRLKETLKELKEYIGERKVVVARELTKIHEEFIRGTVEEVLEKLGEEVKGEIVIVIEGAKISPLQKDPKELLDKY
LKLGMDKKEAVKKVAEELKVSKREVYKLVIDEDIN
>Mature_275_residues
MEEYGTLYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLLNHYEIKKSLVSYHEHNKVTMGPKLIEKLKSGKSI
ALVTDAGTPSISDPGEELVRLCIQEGIKIVPLPGPTAAITALIASGLDASSFVFEGFLPKKSKERREKLERISREERTTI
LYESPHRLKETLKELKEYIGERKVVVARELTKIHEEFIRGTVEEVLEKLGEEVKGEIVIVIEGAKISPLQKDPKELLDKY
LKLGMDKKEAVKKVAEELKVSKREVYKLVIDEDIN

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=225, Percent_Identity=53.7777777777778, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31069; Mature: 31069

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYGTLYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLLNHYEIKKSLVSYHE
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNKVTMGPKLIEKLKSGKSIALVTDAGTPSISDPGEELVRLCIQEGIKIVPLPGPTAAIT
CCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHH
ALIASGLDASSFVFEGFLPKKSKERREKLERISREERTTILYESPHRLKETLKELKEYIG
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHC
ERKVVVARELTKIHEEFIRGTVEEVLEKLGEEVKGEIVIVIEGAKISPLQKDPKELLDKY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH
LKLGMDKKEAVKKVAEELKVSKREVYKLVIDEDIN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEEYGTLYLCPTPIGNLEDITLRVLRVLSEVDLIAAEDTRQTLKLLNHYEIKKSLVSYHE
CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HNKVTMGPKLIEKLKSGKSIALVTDAGTPSISDPGEELVRLCIQEGIKIVPLPGPTAAIT
CCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEECCCCHHHHH
ALIASGLDASSFVFEGFLPKKSKERREKLERISREERTTILYESPHRLKETLKELKEYIG
HHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHC
ERKVVVARELTKIHEEFIRGTVEEVLEKLGEEVKGEIVIVIEGAKISPLQKDPKELLDKY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH
LKLGMDKKEAVKKVAEELKVSKREVYKLVIDEDIN
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]