| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095127
Identifier: 20095127
GI number: 20095127
Start: 1693706
End: 1694500
Strand: Direct
Name: 20095127
Synonym: MK1692
Alternate gene names: NA
Gene position: 1693706-1694500 (Clockwise)
Preceding gene: 20095126
Following gene: NA
Centisome position: 99.93
GC content: 51.7
Gene sequence:
>795_bases CTGGAGCTTTTAAGGAAAAAAGTTAGTGGCAAAAAAATTTGTGTTCTGATTTCAGGCGGGATGGATAGTGCTGTTGCAAC GAAGATTTTACAGTTGTCTAATACCGATGTGAGAGGACTTCATATAACACATAGATGGATGTGGTTCACGCCGGAGATTG AAATCAAACGAATATCTAAAATGCTCGGGATTAAGATAGACGTTGTTGATATAACTGATGAGTTAAGGCGTAGACTTCGA GGTGCTAAAGGCAAATCTGTGTGTAAAATATGCAAGAAGATTATGTTGGAGATAGCTGTTAGTAAGGCCAGTGTTGTGGC CACGGGAGAATGTGGTATGGACACCATAGCGGGTGCCGTTTTGGACGTGTCGAGGCGAACCGGGATCGAACCGGAGTTCG TCCAGTTGCCCAAGAGGTACTTCAACGGAGACGATCGCATCATCGTGCGGCCGCTGATCCGCATCCACGAGAGCGACGTG AAGAGGCTCGCCAGGCTTCTAGGTGTGAAAGTACGACGGGTCGGGGAGACCGGGGATCTCCGTAGGGGACGCCGTGAAGG GTGTCCGCTCCAACACCTGGACCCGTGGGTGGACGTTACCGATGAGCTGATGGACGAAGTCTGGGACGTCAACGTAGAGG CGTTACTCGTAGCCAGGAGGTTAGGGCGTCGGGTATCCGTGAAGTGGCCATCGTTCAGGATCATATTGGAAGGAAGTCCC GAAGAGCGACGTCACGTTGCGGAGTGTGTCTGGTACAGGTGGGTTCGAGCTGGAAGACCCCGCCGGTACAGGTAG
Upstream 100 bases:
>100_bases TTCCAGAAAGCTTAAAACAGATGTTACAGAAGGTTATCAACAAGATATCAAATTCGGATCTTGGACGCGAAAATGGGGAC TAAAATCACTTTCAGAACTT
Downstream 100 bases:
>100_bases AGTCCTATCGTGGCTATCAACGTTACCGCGACTATCAGCGCCGCCACCGATCCCCAGCCTGAGACTACGGGTTCCGGTCT CTCACGCTCCATGACCCTGG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP EERRHVAECVWYRWVRAGRPRRYR
Sequences:
>Translated_264_residues MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP EERRHVAECVWYRWVRAGRPRRYR >Mature_264_residues MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP EERRHVAECVWYRWVRAGRPRRYR
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012122 - InterPro: IPR018317 - InterPro: IPR014729 [H]
Pfam domain/function: PF06508 ExsB [H]
EC number: NA
Molecular weight: Translated: 30338; Mature: 30338
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISK CCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHH MLGIKIDVVDITDELRRRLRGAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAV HHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH LDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDVKRLARLLGVKVRRVGETGDL HHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP HCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEEECCC EERRHVAECVWYRWVRAGRPRRYR HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISK CCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHH MLGIKIDVVDITDELRRRLRGAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAV HHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH LDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDVKRLARLLGVKVRRVGETGDL HHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP HCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEEECCC EERRHVAECVWYRWVRAGRPRRYR HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]