Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095127

Identifier: 20095127

GI number: 20095127

Start: 1693706

End: 1694500

Strand: Direct

Name: 20095127

Synonym: MK1692

Alternate gene names: NA

Gene position: 1693706-1694500 (Clockwise)

Preceding gene: 20095126

Following gene: NA

Centisome position: 99.93

GC content: 51.7

Gene sequence:

>795_bases
CTGGAGCTTTTAAGGAAAAAAGTTAGTGGCAAAAAAATTTGTGTTCTGATTTCAGGCGGGATGGATAGTGCTGTTGCAAC
GAAGATTTTACAGTTGTCTAATACCGATGTGAGAGGACTTCATATAACACATAGATGGATGTGGTTCACGCCGGAGATTG
AAATCAAACGAATATCTAAAATGCTCGGGATTAAGATAGACGTTGTTGATATAACTGATGAGTTAAGGCGTAGACTTCGA
GGTGCTAAAGGCAAATCTGTGTGTAAAATATGCAAGAAGATTATGTTGGAGATAGCTGTTAGTAAGGCCAGTGTTGTGGC
CACGGGAGAATGTGGTATGGACACCATAGCGGGTGCCGTTTTGGACGTGTCGAGGCGAACCGGGATCGAACCGGAGTTCG
TCCAGTTGCCCAAGAGGTACTTCAACGGAGACGATCGCATCATCGTGCGGCCGCTGATCCGCATCCACGAGAGCGACGTG
AAGAGGCTCGCCAGGCTTCTAGGTGTGAAAGTACGACGGGTCGGGGAGACCGGGGATCTCCGTAGGGGACGCCGTGAAGG
GTGTCCGCTCCAACACCTGGACCCGTGGGTGGACGTTACCGATGAGCTGATGGACGAAGTCTGGGACGTCAACGTAGAGG
CGTTACTCGTAGCCAGGAGGTTAGGGCGTCGGGTATCCGTGAAGTGGCCATCGTTCAGGATCATATTGGAAGGAAGTCCC
GAAGAGCGACGTCACGTTGCGGAGTGTGTCTGGTACAGGTGGGTTCGAGCTGGAAGACCCCGCCGGTACAGGTAG

Upstream 100 bases:

>100_bases
TTCCAGAAAGCTTAAAACAGATGTTACAGAAGGTTATCAACAAGATATCAAATTCGGATCTTGGACGCGAAAATGGGGAC
TAAAATCACTTTCAGAACTT

Downstream 100 bases:

>100_bases
AGTCCTATCGTGGCTATCAACGTTACCGCGACTATCAGCGCCGCCACCGATCCCCAGCCTGAGACTACGGGTTCCGGTCT
CTCACGCTCCATGACCCTGG

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR
GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV
KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP
EERRHVAECVWYRWVRAGRPRRYR

Sequences:

>Translated_264_residues
MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR
GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV
KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP
EERRHVAECVWYRWVRAGRPRRYR
>Mature_264_residues
MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISKMLGIKIDVVDITDELRRRLR
GAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAVLDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDV
KRLARLLGVKVRRVGETGDLRRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP
EERRHVAECVWYRWVRAGRPRRYR

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012122
- InterPro:   IPR018317
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06508 ExsB [H]

EC number: NA

Molecular weight: Translated: 30338; Mature: 30338

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISK
CCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHH
MLGIKIDVVDITDELRRRLRGAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAV
HHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH
LDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDVKRLARLLGVKVRRVGETGDL
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP
HCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEEECCC
EERRHVAECVWYRWVRAGRPRRYR
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MELLRKKVSGKKICVLISGGMDSAVATKILQLSNTDVRGLHITHRWMWFTPEIEIKRISK
CCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEEEEEECCCHHHHHHHH
MLGIKIDVVDITDELRRRLRGAKGKSVCKICKKIMLEIAVSKASVVATGECGMDTIAGAV
HHCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHH
LDVSRRTGIEPEFVQLPKRYFNGDDRIIVRPLIRIHESDVKRLARLLGVKVRRVGETGDL
HHHHHHCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RRGRREGCPLQHLDPWVDVTDELMDEVWDVNVEALLVARRLGRRVSVKWPSFRIILEGSP
HCCHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCEEEEEECCC
EERRHVAECVWYRWVRAGRPRRYR
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]