| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095076
Identifier: 20095076
GI number: 20095076
Start: 1640674
End: 1641513
Strand: Reverse
Name: 20095076
Synonym: MK1640
Alternate gene names: NA
Gene position: 1641513-1640674 (Counterclockwise)
Preceding gene: 20095078
Following gene: 20095074
Centisome position: 96.85
GC content: 59.76
Gene sequence:
>840_bases GTGGCCTTGGAGAAGCTAGCGGATCTGCTGGACGTACGCAACGAAAACACCCGGCACTCATACCGCTTCGCTTTACGGAG GCTGGATGAGTTCCTCCGGAGGATCCTGGAGGACGAGGAGCCGGAAGAGTGGCTCGAGAAGGCCCCAGACGAGGAGATTT TAGAGGTAGCACGCGAACTCCGTAACTTGCTGGTGGAGTCAGTCCGTAACATGGAGTTGGACCATGAAATGGGTAGACTG TGCTGGTACGCGCTCACTAAAGCCCTACGAGCCGTTGGTAGGGACCCACTGCTCGTCCTGACCGTGAAGGCGTACGGATC GCCTGCATCGCCCGAGATGACCGAGCAGGACGCTCGTGAAATTTTAGAGCTGGTAGATTTGATCGAGGAGTGGGCAAAAG AAAACAAGGACGCATCCTGGTGGGCGCCGTTCCGCATCATCGCCGAATCGGGAATCAGCGTGATGGACCTAGTGAGGATG CGCTGGGCGGATGTGTGTCCCGGCGAGCCCTGGCTCGAAGAAACGCCGGACGAGCCCCGCCTGAGGGTCGAGAAACCGGA GGAAACCATCGAGTTCCCCATTACCGAGCGAGGACTGGAAGCACTCCGAGAGCTGGCGGAATGGGCCGGTGTAGATCCGA CAGAGGAACCCGAGCGTCCGATACTCATGAGCGAGGACGACGAGTACCACACGGACGCGCAGCGCATGGACTCCTGGAGG GCGAGGCTGACGTACCGCTGGCGTGAAGCTCAGCGGAGTGTACTAGGGGAGTCCGAGTGGAGGATCAAGGATCTCACCAG AGCCACGAGGATACTGCGGCTACCCGAGCTACGTCGGTAA
Upstream 100 bases:
>100_bases TAGCACAACGGCTAATGTGCTGATGGCGTGACGGCGCCACGGCTGGGAGCCGGGGCCCATCCGGACGCCACGTAAAACTT TCACGTAGGGGGAGCCCCCC
Downstream 100 bases:
>100_bases CCTCGTTCGCTCAATCAATTCTTAAATCCCAAATCGTTATAATATTCGTAACGATTCTCAGAATTGGTGGGGCCGCCCGG ATTTGAACCGGGGTCTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRL CWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRM RWADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR
Sequences:
>Translated_279_residues MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRL CWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRM RWADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR >Mature_278_residues ALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVARELRNLLVESVRNMELDHEMGRLC WYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDAREILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMR WADVCPGEPWLEETPDEPRLRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWRA RLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33062; Mature: 32931
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVAREL CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH RNLLVESVRNMELDHEMGRLCWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDARE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH ILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMRWADVCPGEPWLEETPDEPR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR EECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ALEKLADLLDVRNENTRHSYRFALRRLDEFLRRILEDEEPEEWLEKAPDEEILEVAREL CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHH RNLLVESVRNMELDHEMGRLCWYALTKALRAVGRDPLLVLTVKAYGSPASPEMTEQDARE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHH ILELVDLIEEWAKENKDASWWAPFRIIAESGISVMDLVRMRWADVCPGEPWLEETPDEPR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC LRVEKPEETIEFPITERGLEALRELAEWAGVDPTEEPERPILMSEDDEYHTDAQRMDSWR EECCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ARLTYRWREAQRSVLGESEWRIKDLTRATRILRLPELRR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA