Click here to switch to the map view.

The map label for this gene is 20095073

Identifier: 20095073

GI number: 20095073

Start: 1637295

End: 1637957

Strand: Reverse

Name: 20095073

Synonym: MK1637

Alternate gene names: NA

Gene position: 1637957-1637295 (Counterclockwise)

Preceding gene: 20095074

Following gene: 20095072

Centisome position: 96.64

GC content: 63.95

Gene sequence:

>663_bases
CTGACGTCGTCGTTCTACGGGGAGCCGGAGGGACTGCGGTGGCTCGAGGACGATCTGCGCGCGCTCGGCCTCTCGCCGGT
GCGGTACGAGTACGGGGATAGGGACGCGGTCGAAGTCGCGGTGCACTCGGAGGGATTCGCGGCGCTGTTGAGAGGACTGG
GAATGCCGGAAGGGAGGAAGACGGGGAGGGTTCATGTGCCCGGCTTAGTTCGCCGAGGGCCGGATCGGGTCGCATTAGAA
TTCCTGTCTGGTCTGTTCGGGGCGGACGGTTGGATATCGGCTCGTGAGAACAGAGTGGAGGTAGGGATCGCTCAGGCGTC
GCCCTGGGGAGAGTCATCTGAGTTTCTGGAGGGGGTTAGTAGCCTGCTGAAGCGCACGACCGGCGTGTATGCGAGAGTTC
TTGAGGCTGGATCGTACGAAACCTCGGTAGATGGACGTCGATCCGTTTTCGGGTTAGGGTTCAGAGGGGAACACGTCGAG
CGGTTTCTCACCCGCGTTCCCTTCGAGTACTCGGTCCGGAAGCGGGAGCTCGGGCTGTGGGCGGGTGCATACCTGCGGTA
CCGGGCCCGAGGTGGTAAGGACGCGTTCGAGCGGTTCGTCGAGGAGCGGTGTCTACCGGGCGGCCTGGTGCTCGATAGGG
TAGTCGACGTCGAGCGCCGCTGA

Upstream 100 bases:

>100_bases
CTCCGGGACCTGGACTTACTACCGCTTAGGTGGGAGGATCCGGCGCTACCGACGTTGACCCGGGTTCTGGGGTACGCGAT
CGGCGACGGCCATCTGGAGC

Downstream 100 bases:

>100_bases
GTTCGGCTCGGCGTGACATCCCCCGGTATCGTGAGGGTGCGCCCTCGTCCGGGCCCGAGTTGCCTTCCCACAGGAGTTGT
ATGGTACGAGTCACCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MTSSFYGEPEGLRWLEDDLRALGLSPVRYEYGDRDAVEVAVHSEGFAALLRGLGMPEGRKTGRVHVPGLVRRGPDRVALE
FLSGLFGADGWISARENRVEVGIAQASPWGESSEFLEGVSSLLKRTTGVYARVLEAGSYETSVDGRRSVFGLGFRGEHVE
RFLTRVPFEYSVRKRELGLWAGAYLRYRARGGKDAFERFVEERCLPGGLVLDRVVDVERR

Sequences:

>Translated_220_residues
MTSSFYGEPEGLRWLEDDLRALGLSPVRYEYGDRDAVEVAVHSEGFAALLRGLGMPEGRKTGRVHVPGLVRRGPDRVALE
FLSGLFGADGWISARENRVEVGIAQASPWGESSEFLEGVSSLLKRTTGVYARVLEAGSYETSVDGRRSVFGLGFRGEHVE
RFLTRVPFEYSVRKRELGLWAGAYLRYRARGGKDAFERFVEERCLPGGLVLDRVVDVERR
>Mature_219_residues
TSSFYGEPEGLRWLEDDLRALGLSPVRYEYGDRDAVEVAVHSEGFAALLRGLGMPEGRKTGRVHVPGLVRRGPDRVALEF
LSGLFGADGWISARENRVEVGIAQASPWGESSEFLEGVSSLLKRTTGVYARVLEAGSYETSVDGRRSVFGLGFRGEHVER
FLTRVPFEYSVRKRELGLWAGAYLRYRARGGKDAFERFVEERCLPGGLVLDRVVDVERR

Specific function: Unknown

COG id: COG1372

COG function: function code L; Intein/homing endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DOD-type homing endonuclease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003586
- InterPro:   IPR003587
- InterPro:   IPR006142
- InterPro:   IPR004042
- InterPro:   IPR006141
- InterPro:   IPR001233 [H]

Pfam domain/function: PF01139 UPF0027 [H]

EC number: NA

Molecular weight: Translated: 24573; Mature: 24442

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSFYGEPEGLRWLEDDLRALGLSPVRYEYGDRDAVEVAVHSEGFAALLRGLGMPEGRK
CCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCC
TGRVHVPGLVRRGPDRVALEFLSGLFGADGWISARENRVEVGIAQASPWGESSEFLEGVS
CCEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
SLLKRTTGVYARVLEAGSYETSVDGRRSVFGLGFRGEHVERFLTRVPFEYSVRKRELGLW
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
AGAYLRYRARGGKDAFERFVEERCLPGGLVLDRVVDVERR
HHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
TSSFYGEPEGLRWLEDDLRALGLSPVRYEYGDRDAVEVAVHSEGFAALLRGLGMPEGRK
CCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCEEEEEECCCCHHHHHHHCCCCCCCC
TGRVHVPGLVRRGPDRVALEFLSGLFGADGWISARENRVEVGIAQASPWGESSEFLEGVS
CCEEECCHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
SLLKRTTGVYARVLEAGSYETSVDGRRSVFGLGFRGEHVERFLTRVPFEYSVRKRELGLW
HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHH
AGAYLRYRARGGKDAFERFVEERCLPGGLVLDRVVDVERR
HHHHHHEECCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]