| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is aroK [H]
Identifier: 20095046
GI number: 20095046
Start: 1617867
End: 1618727
Strand: Reverse
Name: aroK [H]
Synonym: MK1610
Alternate gene names: 20095046
Gene position: 1618727-1617867 (Counterclockwise)
Preceding gene: 20095047
Following gene: 20095045
Centisome position: 95.5
GC content: 59.81
Gene sequence:
>861_bases TTGGGGGAGGGAATAGCGTACGCCGCCGGTACCGTTGTCAACGCTATCTCTGCCAAAAAAGGTTGTGCCTACGCGTTAGA TCTAACAGTTTCAGTCAGAGCGGAACTTTCCGATTCCACGGAGATTCACACGGACGTGGAGGACACGTCACTCGTTGAAC GGTGCGTGGAGGTCGTCGGCGAACACGTCGGTCAGGAACTGAACTTCGAGATCGAGGTCGACTCCGAAATCCCGATTGCG ATGGGGCTGGCCAGCAGCAGTGCCGTGTCCAACGCCGTGGTCGAAGCCCTGCTCAAAGAGCTAGGACGTGAGCCGGAACC CTTCGAGGTCGTCCGACTCGGCGTCGAGGCCAGCATCAGGGCTGGTGTGACGGTAACAGGGGCCTACGACGACGCCTGTG CATCGTACTTAGGTGGCTTAGTGCTGACGCTGAACGATCAGCACCGAGTGCTGGATATCCGCGAGCTTCCGTACCCCTAT GCGGTGATCCTGCTCCCGGGAGGTAAGGTCGAAACCTCGGAGGTGGATGTGAACCGTCTCGAGTTGTTAGCTCCTGCCGC CGAGACTGCTTTCCGGAGGGCGATGACGGGGGATTACCGGGGAGCAATGCTGATCAACTCGGCGGTGTACTGCTCCGCCC TGGGTCACGAATTCGAACCCGTGGTCGAAGCTTTAGAAGCAGGTGCTGCGGCGGCGGGGCTTTCGGGAACCGGGCCGGCG TTCGTCGCCCTCTGCGAGACGAAGTCGGACGTTAGAGAGGTATCCGAAGTTTGGTCCGATAGAGGTGAGGTACTGGAAAC GAGAACCGTGGGGCCTGAACGTGCTCGAGGAGCTCAGGCGCGAAATAGACCGCATCGATGA
Upstream 100 bases:
>100_bases CGGCGGTTCATCGGCGGATAACCCCCACCTCACCGCCGCCTGCCGAACCGGGGCGGGCCCGCGCTCGGGCTCTGATCAGC GTTTTCCGGGGTGAAGACGT
Downstream 100 bases:
>100_bases GTGTTTGCTGGACGCAGTCATCGAGCGCCTGAAGGTGGCGCGGGAAATAGGGCGCGTAAAGGCTCAGGAGGGGTTACCAC TGACGGACGAGGAGCGGGAG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MGEGIAYAAGTVVNAISAKKGCAYALDLTVSVRAELSDSTEIHTDVEDTSLVERCVEVVGEHVGQELNFEIEVDSEIPIA MGLASSSAVSNAVVEALLKELGREPEPFEVVRLGVEASIRAGVTVTGAYDDACASYLGGLVLTLNDQHRVLDIRELPYPY AVILLPGGKVETSEVDVNRLELLAPAAETAFRRAMTGDYRGAMLINSAVYCSALGHEFEPVVEALEAGAAAAGLSGTGPA FVALCETKSDVREVSEVWSDRGEVLETRTVGPERARGAQARNRPHR
Sequences:
>Translated_286_residues MGEGIAYAAGTVVNAISAKKGCAYALDLTVSVRAELSDSTEIHTDVEDTSLVERCVEVVGEHVGQELNFEIEVDSEIPIA MGLASSSAVSNAVVEALLKELGREPEPFEVVRLGVEASIRAGVTVTGAYDDACASYLGGLVLTLNDQHRVLDIRELPYPY AVILLPGGKVETSEVDVNRLELLAPAAETAFRRAMTGDYRGAMLINSAVYCSALGHEFEPVVEALEAGAAAAGLSGTGPA FVALCETKSDVREVSEVWSDRGEVLETRTVGPERARGAQARNRPHR >Mature_285_residues GEGIAYAAGTVVNAISAKKGCAYALDLTVSVRAELSDSTEIHTDVEDTSLVERCVEVVGEHVGQELNFEIEVDSEIPIAM GLASSSAVSNAVVEALLKELGREPEPFEVVRLGVEASIRAGVTVTGAYDDACASYLGGLVLTLNDQHRVLDIRELPYPYA VILLPGGKVETSEVDVNRLELLAPAAETAFRRAMTGDYRGAMLINSAVYCSALGHEFEPVVEALEAGAAAAGLSGTGPAF VALCETKSDVREVSEVWSDRGEVLETRTVGPERARGAQARNRPHR
Specific function: Unknown
COG id: COG1685
COG function: function code EH; Archaeal shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Archaeal shikimate kinase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR010189 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 30315; Mature: 30184
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEGIAYAAGTVVNAISAKKGCAYALDLTVSVRAELSDSTEIHTDVEDTSLVERCVEVVG CCCCCEEHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHH EHVGQELNFEIEVDSEIPIAMGLASSSAVSNAVVEALLKELGREPEPFEVVRLGVEASIR HHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHEE AGVTVTGAYDDACASYLGGLVLTLNDQHRVLDIRELPYPYAVILLPGGKVETSEVDVNRL CCEEEECCCHHHHHHHHCCEEEEECCCCEEEEHCCCCCCEEEEEECCCCEECCCCCHHHH ELLAPAAETAFRRAMTGDYRGAMLINSAVYCSALGHEFEPVVEALEAGAAAAGLSGTGPA HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCE FVALCETKSDVREVSEVWSDRGEVLETRTVGPERARGAQARNRPHR EEEEECCHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCC >Mature Secondary Structure GEGIAYAAGTVVNAISAKKGCAYALDLTVSVRAELSDSTEIHTDVEDTSLVERCVEVVG CCCCEEHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCEEECCCHHHHHHHHHHHHHH EHVGQELNFEIEVDSEIPIAMGLASSSAVSNAVVEALLKELGREPEPFEVVRLGVEASIR HHCCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHEE AGVTVTGAYDDACASYLGGLVLTLNDQHRVLDIRELPYPYAVILLPGGKVETSEVDVNRL CCEEEECCCHHHHHHHHCCEEEEECCCCEEEEHCCCCCCEEEEEECCCCEECCCCCHHHH ELLAPAAETAFRRAMTGDYRGAMLINSAVYCSALGHEFEPVVEALEAGAAAAGLSGTGPA HHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCHHHHHHHHHCCCHHCCCCCCCCE FVALCETKSDVREVSEVWSDRGEVLETRTVGPERARGAQARNRPHR EEEEECCHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA