Click here to switch to the map view.

The map label for this gene is rps2P

Identifier: 20095014

GI number: 20095014

Start: 1591464

End: 1592075

Strand: Reverse

Name: rps2P

Synonym: MK1578

Alternate gene names: 20095014

Gene position: 1592075-1591464 (Counterclockwise)

Preceding gene: 20095015

Following gene: 20095013

Centisome position: 93.93

GC content: 61.76

Gene sequence:

>612_bases
ATGTCCGAAAACGACGACCTGCTCGTTCCGCTGAACGACTACCTGGCGGCAGGTGTGCACATCGGTACCCAGCAGAAGAC
GAAGGACATGGAGCCGTTCATTTACAGGACGCGGGCCGACGGACTCCACGTCATCGACGTACGCAAGACCGATGAGCGCA
TCCGGATCGCGGCCAACTTCCTGTCCATGTACAACACCGACGAGATACTGGTAGTGTCCAGGCGCTACTACGGTCAGAAG
CCCGTCAGCAAGTTCGCCGAGGCCACCGGGACCACCGCGATTCCGGGCAGGTTCGTGCCCGGCACATTGACGAACCCCGA
GTACGATGGATACCTGGAGCCCGAGGTGATCGTCCTCACGGATCCGCGTGCGGACTTCCAGGCACTCGTCGAGGCACAGA
GCGTCGGGATCCCGATCGTGGCACTGTGCGACACGGACAACTTCACGGGTAACGTGGACCTGGCGATTCCAACGAACAAC
AAGGGTAGGAAGGCGCTGGCCCTGGTGTACTGGCTGCTGGCCCGCGAGCTCCTGAAAAAGCTGGGTCGTCTGGAGGAAGA
CGAGGAGTTCGAGTACGACCCGGAGGACTTCGAGGGGCCACCTCCGCGGTGA

Upstream 100 bases:

>100_bases
CTGCACCGGCTGTGGCCTCTGCGAGCAGGCTTGTCCACACGGTGCCATCGAAGTCGAGGTGTAACCCCTCTCCCCGGACG
TATCTTCCGGGGGTGACTCG

Downstream 100 bases:

>100_bases
ACCGGGGTCCACGCCCCCATGACCTACGGAATCTCGAAGCACCTAGAGATAAGCGGTGAGTACAGGGATAAGCTCCTCCG
GGGTGAGAAACGGGCGACGA

Product: 30S ribosomal protein S2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSENDDLLVPLNDYLAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFLSMYNTDEILVVSRRYYGQK
PVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLTDPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNN
KGRKALALVYWLLARELLKKLGRLEEDEEFEYDPEDFEGPPPR

Sequences:

>Translated_203_residues
MSENDDLLVPLNDYLAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFLSMYNTDEILVVSRRYYGQK
PVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLTDPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNN
KGRKALALVYWLLARELLKKLGRLEEDEEFEYDPEDFEGPPPR
>Mature_202_residues
SENDDLLVPLNDYLAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANFLSMYNTDEILVVSRRYYGQKP
VSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLTDPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNNK
GRKALALVYWLLARELLKKLGRLEEDEEFEYDPEDFEGPPPR

Specific function: Unknown

COG id: COG0052

COG function: function code J; Ribosomal protein S2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S2P family

Homologues:

Organism=Homo sapiens, GI9845502, Length=207, Percent_Identity=41.5458937198068, Blast_Score=166, Evalue=1e-41,
Organism=Homo sapiens, GI59859885, Length=207, Percent_Identity=41.5458937198068, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17554768, Length=177, Percent_Identity=38.9830508474576, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6323077, Length=171, Percent_Identity=43.859649122807, Blast_Score=155, Evalue=4e-39,
Organism=Saccharomyces cerevisiae, GI6321653, Length=171, Percent_Identity=43.2748538011696, Blast_Score=155, Evalue=5e-39,
Organism=Drosophila melanogaster, GI45551198, Length=181, Percent_Identity=39.2265193370166, Blast_Score=148, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24639112, Length=181, Percent_Identity=39.2265193370166, Blast_Score=147, Evalue=3e-36,
Organism=Drosophila melanogaster, GI17136518, Length=181, Percent_Identity=39.2265193370166, Blast_Score=147, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS2_METKA (Q8TV23)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614861.1
- ProteinModelPortal:   Q8TV23
- SMR:   Q8TV23
- GeneID:   1478173
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1578
- NMPDR:   fig|190192.1.peg.1574
- HOGENOM:   HBG736296
- OMA:   NTVAGRF
- ProtClustDB:   PRK04020
- BioCyc:   MKAN190192:MK1578-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00291_A
- InterPro:   IPR001865
- InterPro:   IPR018130
- InterPro:   IPR005707
- PANTHER:   PTHR11489
- PRINTS:   PR00395
- TIGRFAMs:   TIGR01012

Pfam domain/function: PF00318 Ribosomal_S2; SSF52313 Ribosomal_S2

EC number: NA

Molecular weight: Translated: 22822; Mature: 22691

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS00962 RIBOSOMAL_S2_1; PS00963 RIBOSOMAL_S2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENDDLLVPLNDYLAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANF
CCCCCCEEEEHHHHHHCCEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
LSMYNTDEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLT
HHHCCCCEEEEEECHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKK
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LGRLEEDEEFEYDPEDFEGPPPR
HCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SENDDLLVPLNDYLAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAANF
CCCCCEEEEHHHHHHCCEEECCCCCCCCCCCEEEEECCCCEEEEEEECCCCHHHHHHHH
LSMYNTDEILVVSRRYYGQKPVSKFAEATGTTAIPGRFVPGTLTNPEYDGYLEPEVIVLT
HHHCCCCEEEEEECHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
DPRADFQALVEAQSVGIPIVALCDTDNFTGNVDLAIPTNNKGRKALALVYWLLARELLKK
CCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
LGRLEEDEEFEYDPEDFEGPPPR
HCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014