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The map label for this gene is RPS8A

Identifier: 20094981

GI number: 20094981

Start: 1563101

End: 1563502

Strand: Direct

Name: RPS8A

Synonym: MK1545

Alternate gene names: 20094981

Gene position: 1563101-1563502 (Clockwise)

Preceding gene: 20094978

Following gene: 20094984

Centisome position: 92.22

GC content: 58.96

Gene sequence:

>402_bases
TTGGGTGTATGGCACGGACGCTCACTACGTAAGCCGACCGGAGGAAGGATCCGGCCGCACCGGAAGAAGCGGAAGTTCGA
AATGGGTAATCCTCCCACGGAGACGCTGGTAGGGGAAGAGCGGAAACTCAAGGAGCGACGCGGCATGGGTGGTAACGTCA
AGAAGGGCCTCAAGTTCGCGACGCACGCCAACGTCGCCGACCCGGAAACGGGTGAGGTGAAGTGCGTAAGGATCGAGGAA
GTCGTCAAGAACCCAGCGTCCCAGTACTACGAGCGTCACGGAGTGATCACTAAGGGAGCGATCATTCGGACGGAGATCGG
GCTCGCGAAGGTCACGAATCGACCGGGTCAGGAACCCGTCGTTAACGCGGTCCTCATCAAGGAGGAAGAGGAAGAAGGTT
AA

Upstream 100 bases:

>100_bases
CTCTCCACCGGCCCCGTGTTCGCGGCGTACTTTACTCACGTCCGTATTCCCCCGCCAGCTTTTTACGGCCGGGTAGACCG
GCCGACCCGGGGGGTTCAGC

Downstream 100 bases:

>100_bases
GGGAGCAGTCTCTCGGCGAGTTCCGCCATCCCTTCTCCCGTCTTGATGCTCGTGAGGTATACTTCGAGGTCCGGATTTAT
CTCCTTAGCCGTACGGACCA

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MGVWHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFATHANVADPETGEVKCVRIEE
VVKNPASQYYERHGVITKGAIIRTEIGLAKVTNRPGQEPVVNAVLIKEEEEEG

Sequences:

>Translated_133_residues
MGVWHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFATHANVADPETGEVKCVRIEE
VVKNPASQYYERHGVITKGAIIRTEIGLAKVTNRPGQEPVVNAVLIKEEEEEG
>Mature_132_residues
GVWHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFATHANVADPETGEVKCVRIEEV
VKNPASQYYERHGVITKGAIIRTEIGLAKVTNRPGQEPVVNAVLIKEEEEEG

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_METKA (Q8TV55)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614828.1
- ProteinModelPortal:   Q8TV55
- GeneID:   1478140
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1545
- NMPDR:   fig|190192.1.peg.1541
- HOGENOM:   HBG745393
- OMA:   GGNRKVR
- ProtClustDB:   PRK04049
- BioCyc:   MKAN190192:MK1545-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 14876; Mature: 14745

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVWHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFA
CCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCCCHHHCCEEC
THANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAIIRTEIGLAKVTNRPGQEPV
CCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCC
VNAVLIKEEEEEG
EEEEEEECCCCCC
>Mature Secondary Structure 
GVWHGRSLRKPTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVKKGLKFA
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHCCCHHHHHHHCCCCCCHHHCCEEC
THANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAIIRTEIGLAKVTNRPGQEPV
CCCCCCCCCCCCEEEEEHHHHHCCHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCCCCCC
VNAVLIKEEEEEG
EEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014