| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094904
Identifier: 20094904
GI number: 20094904
Start: 1493507
End: 1494061
Strand: Direct
Name: 20094904
Synonym: MK1468
Alternate gene names: NA
Gene position: 1493507-1494061 (Clockwise)
Preceding gene: 20094903
Following gene: 20094905
Centisome position: 88.11
GC content: 60.36
Gene sequence:
>555_bases CTGAAGGCCCAATGGGTCGCCCTGAACGAGGTAGTGAGCGAGCTTCGAGCACGGGGAGAAGAGGTGCCGGGAGAAGTCCT CGAGAACTTGCGGACGGCGCGAGTAATCCTCCATCATTACGAGTTCGACCCTCACACATCCGCCAGGACTCTGGGGAAGG CCCACAAGTACCTGGATAGGGCTCAGCGGGCGCTCGCCAGGATCTGTGAGTCCCATCCGGATCTACTGGATAAGTTGGTG GAGTGGCCGAAGCGCGTGAAGGAGCTGGCCGCGAGGTTCCGGGAGGACACCGCCCGCTCTAAGTTCGAGCCGATGCCCAA TCGACCGGTTCCCAGGGCCGGTGACGGGTTCGCCCGTGTGAGGCTCCCGGAACCTATCGAAGTCGAGAGGCTTCAGGACG TGTGTGAGTTCGCGGGAGTGATAGTCGAGATGAAGGAGGTAGACGTAGTGGAGGTATTCGGGGACAGGGACCGCGTCGGG ACGGCGCTCAAGGAACTCAGAGAGCTGCCGGAATCTTGGAAGAAGATGCTCGAGAAACGCAAGAGCAATGAATAA
Upstream 100 bases:
>100_bases AGGTAGAATCCGAAGAGGACGTCGAACGCCTGTTAAGGGAGGATATGGGGGCGGAGCTATCACGGGATTCGAAGGCGTCG GTGAGGAGAGTGCTGAACCG
Downstream 100 bases:
>100_bases GTAAAGATCGACGGACGGTCCCGCTGATCGCACGACCGGGGTGATGCGCTCGTGATCGGTATCGCGACGGCTGACTTCCA CGGGGACGTGGAGAAGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG TALKELRELPESWKKMLEKRKSNE
Sequences:
>Translated_184_residues MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG TALKELRELPESWKKMLEKRKSNE >Mature_184_residues MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDRAQRALARICESHPDLLDKLV EWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARVRLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVG TALKELRELPESWKKMLEKRKSNE
Specific function: Unknown
COG id: COG4010
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017098 [H]
Pfam domain/function: PF09869 DUF2096 [H]
EC number: NA
Molecular weight: Translated: 21303; Mature: 21303
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDR CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AQRALARICESHPDLLDKLVEWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE RLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVGTALKELRELPESWKKMLEKR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KSNE CCCC >Mature Secondary Structure MKAQWVALNEVVSELRARGEEVPGEVLENLRTARVILHHYEFDPHTSARTLGKAHKYLDR CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH AQRALARICESHPDLLDKLVEWPKRVKELAARFREDTARSKFEPMPNRPVPRAGDGFARV HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE RLPEPIEVERLQDVCEFAGVIVEMKEVDVVEVFGDRDRVGTALKELRELPESWKKMLEKR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KSNE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]