| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is QRI7
Identifier: 20094894
GI number: 20094894
Start: 1484461
End: 1485501
Strand: Direct
Name: QRI7
Synonym: MK1458
Alternate gene names: 20094894
Gene position: 1484461-1485501 (Clockwise)
Preceding gene: 20094892
Following gene: 20094895
Centisome position: 87.58
GC content: 63.4
Gene sequence:
>1041_bases ATGATCTGTGTGGGTATAGAGTCTACGGCCGAGAAACTCGGCGTGGGTGTCGTGACGGACGACGGGGAGATACTGGTCAA CGTGAAGGCTCAGTACATCCCCCCTCCGGGCTCGGGGATACTACCCAGAGAGGCGGCTGAACATCACTCCAGAGAACTGC CGGAGCTCCTCGAACGCGCGTTGAAGAACGCGGGAGTGGAGCCCGAAGACATCGACTTAGTGGCTTACTCGCAAGGGCCT GGACTGGGACCCTGCCTACGTGTCGGCGCCACCGCGGCCCGAACCCTGGCACTGACGCTCGAGGTCCCCCTGGCACCGGT CAACCACTGCGTGGCCCACGTGGAGATAGGGAAGTTAGCGGCACGCCAGGACGGGTTCGATTTCGACGAGCCGGTAACAC TCTACGTGTCCGGAGGGAACACCCAGGTGCTGGCCCTCAAAGCCGGACGATACCGGGTGTTCGGGGAAACCCTGGATCTC CCCGTGGGTAACATGCTGGACACTTTCGCCCGTAAGGTCGGACTCCCACATCCCGGTGGGCCCGAGATAGAACGCCTCGC CGAGGAAGGTGAGCCCGTGGAACTCCCTTACACTGTACGTGGCACCGACGTGTCGTTCTCAGGCCTTCTGACGGCGGCAC TGCGGAGATACGAGCAGGGAGACAGGCTCGAGGACGTGTGTGCAGGACTTCAGGAGACAGCCTTCGCAATGCTGGTGGAG ATAACGGAGCGTGCCGCGGCCCAGCTGGGCCGGGATGAGATCCTGCTCACGGGAGGGGTGGCCGCGAACCGTCGTCTCTC CGAGATGATGCACGAAATGGCGGAGGACCGCGGTGCGGAGGCGTACACGGTGCCCCCGGAACTGGCCGGAGACAACGGGG CCATGATCGCTTGGACGGGGATCCTCGTCCACGAACACGGCCTCTCGATACCGCCCGATGAGATCCCGGAGAAGGCTATC GTCAAGCAACGATACCGTGTAGACGAGGCGCCCGTCCCGTGGGCCGCTCGTCCTTCCAGATCGGCCGATTCTCAAGGATA G
Upstream 100 bases:
>100_bases CCAGCTCCTCCAGTACGAACCTACAGTCCCGGCGGAACAGGGACAAGTTAAGATCCGTCATCGCGCCTTTCCCCGCAGGC GGGGTGCCGTAATGTCGACG
Downstream 100 bases:
>100_bases AGTAGGCAGCTCGTCGAGCCCACGCTATGGGGGTTGGAACTGGCCCGTAGACGACGGTGGGTTACCATCTTCAGGATACC CACGGAAATCCGGGCTCACG
Product: putative DNA-binding/iron metalloprotein/AP endonuclease
Products: NA
Alternate protein names: Glycoprotease
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MICVGIESTAEKLGVGVVTDDGEILVNVKAQYIPPPGSGILPREAAEHHSRELPELLERALKNAGVEPEDIDLVAYSQGP GLGPCLRVGATAARTLALTLEVPLAPVNHCVAHVEIGKLAARQDGFDFDEPVTLYVSGGNTQVLALKAGRYRVFGETLDL PVGNMLDTFARKVGLPHPGGPEIERLAEEGEPVELPYTVRGTDVSFSGLLTAALRRYEQGDRLEDVCAGLQETAFAMLVE ITERAAAQLGRDEILLTGGVAANRRLSEMMHEMAEDRGAEAYTVPPELAGDNGAMIAWTGILVHEHGLSIPPDEIPEKAI VKQRYRVDEAPVPWAARPSRSADSQG
Sequences:
>Translated_346_residues MICVGIESTAEKLGVGVVTDDGEILVNVKAQYIPPPGSGILPREAAEHHSRELPELLERALKNAGVEPEDIDLVAYSQGP GLGPCLRVGATAARTLALTLEVPLAPVNHCVAHVEIGKLAARQDGFDFDEPVTLYVSGGNTQVLALKAGRYRVFGETLDL PVGNMLDTFARKVGLPHPGGPEIERLAEEGEPVELPYTVRGTDVSFSGLLTAALRRYEQGDRLEDVCAGLQETAFAMLVE ITERAAAQLGRDEILLTGGVAANRRLSEMMHEMAEDRGAEAYTVPPELAGDNGAMIAWTGILVHEHGLSIPPDEIPEKAI VKQRYRVDEAPVPWAARPSRSADSQG >Mature_346_residues MICVGIESTAEKLGVGVVTDDGEILVNVKAQYIPPPGSGILPREAAEHHSRELPELLERALKNAGVEPEDIDLVAYSQGP GLGPCLRVGATAARTLALTLEVPLAPVNHCVAHVEIGKLAARQDGFDFDEPVTLYVSGGNTQVLALKAGRYRVFGETLDL PVGNMLDTFARKVGLPHPGGPEIERLAEEGEPVELPYTVRGTDVSFSGLLTAALRRYEQGDRLEDVCAGLQETAFAMLVE ITERAAAQLGRDEILLTGGVAANRRLSEMMHEMAEDRGAEAYTVPPELAGDNGAMIAWTGILVHEHGLSIPPDEIPEKAI VKQRYRVDEAPVPWAARPSRSADSQG
Specific function: Could Be A Metalloprotease. [C]
COG id: COG0533
COG function: function code O; Metal-dependent proteases with possible chaperone activity
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family
Homologues:
Organism=Homo sapiens, GI8923380, Length=340, Percent_Identity=47.0588235294118, Blast_Score=283, Evalue=2e-76, Organism=Homo sapiens, GI116812636, Length=349, Percent_Identity=28.6532951289398, Blast_Score=115, Evalue=5e-26, Organism=Escherichia coli, GI1789445, Length=324, Percent_Identity=34.8765432098765, Blast_Score=170, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71995670, Length=345, Percent_Identity=47.2463768115942, Blast_Score=289, Evalue=2e-78, Organism=Caenorhabditis elegans, GI17557464, Length=344, Percent_Identity=26.7441860465116, Blast_Score=99, Evalue=2e-21, Organism=Saccharomyces cerevisiae, GI6322891, Length=376, Percent_Identity=39.8936170212766, Blast_Score=260, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6320099, Length=320, Percent_Identity=25.625, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI21357207, Length=355, Percent_Identity=45.0704225352113, Blast_Score=295, Evalue=3e-80, Organism=Drosophila melanogaster, GI20129063, Length=337, Percent_Identity=29.080118694362, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCP_METKA (Q8TVD4)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614741.1 - ProteinModelPortal: Q8TVD4 - SMR: Q8TVD4 - MEROPS: M22.003 - GeneID: 1478053 - GenomeReviews: AE009439_GR - KEGG: mka:MK1458 - NMPDR: fig|190192.1.peg.1454 - HOGENOM: HBG304663 - OMA: TQRFRTD - ProtClustDB: PRK14878 - BioCyc: MKAN190192:MK1458-MONOMER - BRENDA: 3.4.24.57 - GO: GO:0006508 - HAMAP: MF_01446 - InterPro: IPR022449 - InterPro: IPR000905 - InterPro: IPR017861 - PANTHER: PTHR11735 - PRINTS: PR00789 - TIGRFAMs: TIGR03722 - TIGRFAMs: TIGR00329
Pfam domain/function: PF00814 Peptidase_M22
EC number: =3.4.24.57
Molecular weight: Translated: 37058; Mature: 37058
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS01016 GLYCOPROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICVGIESTAEKLGVGVVTDDGEILVNVKAQYIPPPGSGILPREAAEHHSRELPELLERA CEEECCCHHHHHHCCEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LKNAGVEPEDIDLVAYSQGPGLGPCLRVGATAARTLALTLEVPLAPVNHCVAHVEIGKLA HHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHH ARQDGFDFDEPVTLYVSGGNTQVLALKAGRYRVFGETLDLPVGNMLDTFARKVGLPHPGG HHCCCCCCCCCEEEEEECCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCC PEIERLAEEGEPVELPYTVRGTDVSFSGLLTAALRRYEQGDRLEDVCAGLQETAFAMLVE HHHHHHHHCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH ITERAAAQLGRDEILLTGGVAANRRLSEMMHEMAEDRGAEAYTVPPELAGDNGAMIAWTG HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCEEEEEE ILVHEHGLSIPPDEIPEKAIVKQRYRVDEAPVPWAARPSRSADSQG EEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MICVGIESTAEKLGVGVVTDDGEILVNVKAQYIPPPGSGILPREAAEHHSRELPELLERA CEEECCCHHHHHHCCEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH LKNAGVEPEDIDLVAYSQGPGLGPCLRVGATAARTLALTLEVPLAPVNHCVAHVEIGKLA HHHCCCCCCCEEEEEECCCCCCCHHHHHCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHH ARQDGFDFDEPVTLYVSGGNTQVLALKAGRYRVFGETLDLPVGNMLDTFARKVGLPHPGG HHCCCCCCCCCEEEEEECCCEEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCC PEIERLAEEGEPVELPYTVRGTDVSFSGLLTAALRRYEQGDRLEDVCAGLQETAFAMLVE HHHHHHHHCCCCEECCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHH ITERAAAQLGRDEILLTGGVAANRRLSEMMHEMAEDRGAEAYTVPPELAGDNGAMIAWTG HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCCCEEEEEE ILVHEHGLSIPPDEIPEKAIVKQRYRVDEAPVPWAARPSRSADSQG EEEEECCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014