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The map label for this gene is RPS24A

Identifier: 20094890

GI number: 20094890

Start: 1482334

End: 1482684

Strand: Direct

Name: RPS24A

Synonym: MK1454

Alternate gene names: 20094890

Gene position: 1482334-1482684 (Clockwise)

Preceding gene: 20094889

Following gene: 20094891

Centisome position: 87.45

GC content: 55.84

Gene sequence:

>351_bases
ATGGAAGTCGAGATCTTGGATCAGCGGGATAACCCCTTGCTGTACCGCAAAGAGGTGAAGTTCGTCGTACGCCACGAAGA
CAGTGGTACGCCCCAGAAGTCGGAGGTCCTTCGGAAGCTCGCGGCGATTCTCGACGTTGACAAGGAGGTAGTCCTGATCG
ACCGTATGGAGTCGGAGTTCGGAAAGCGTGAGACCAAAGGGTACGCGAAGATCTACAAGAGCATGGAGCATCTGGAGGAC
ATCGAGCCCGAGCACATGGTCGAGCGACACAAGAAGGTGCTTGAAGAGCTGGAGTCCGAATCCGAGGAGTCCGAAGAGTC
CGAGTCGGAGGAGTCGGAAGAAGAGGAGTAA

Upstream 100 bases:

>100_bases
GCTACGGGTTGCCGGGCGAGGGAATGGTGGCGGCGCGGGTAACCCAACACCTCAAGGATTCTGTCCTCCGACTGCTAACG
AGGTTTCGGGGGTACGACGA

Downstream 100 bases:

>100_bases
CCGGGGGTAAAACGGGATGGGTGTGCCCAGGAGGGCTAAGCTGTACGAGGTTAAGGACGGTAAGGTGGAGCGCAAAAACC
CGTTCTGCCCAAGATGCGGG

Product: ribosomal protein S24E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MEVEILDQRDNPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAKIYKSMEHLED
IEPEHMVERHKKVLEELESESEESEESESEESEEEE

Sequences:

>Translated_116_residues
MEVEILDQRDNPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAKIYKSMEHLED
IEPEHMVERHKKVLEELESESEESEESESEESEEEE
>Mature_116_residues
MEVEILDQRDNPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAKIYKSMEHLED
IEPEHMVERHKKVLEELESESEESEESESEESEEEE

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS24_METKA (Q8TVD8)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614737.1
- ProteinModelPortal:   Q8TVD8
- SMR:   Q8TVD8
- GeneID:   1478049
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1454
- NMPDR:   fig|190192.1.peg.1450
- HOGENOM:   HBG553552
- OMA:   NPMLHRT
- BioCyc:   MKAN190192:MK1454-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00545
- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- Gene3D:   G3DSA:3.30.70.330
- PANTHER:   PTHR10496
- ProDom:   PD006052

Pfam domain/function: PF01282 Ribosomal_S24e; SSF54189 L23_L15e_core

EC number: NA

Molecular weight: Translated: 13736; Mature: 13736

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS00529 RIBOSOMAL_S24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVEILDQRDNPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEF
CCCEECCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GKRETKGYAKIYKSMEHLEDIEPEHMVERHKKVLEELESESEESEESESEESEEEE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEVEILDQRDNPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEF
CCCEECCCCCCCCCHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
GKRETKGYAKIYKSMEHLEDIEPEHMVERHKKVLEELESESEESEESESEESEEEE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014