| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094889
Identifier: 20094889
GI number: 20094889
Start: 1481816
End: 1482391
Strand: Direct
Name: 20094889
Synonym: MK1453
Alternate gene names: NA
Gene position: 1481816-1482391 (Clockwise)
Preceding gene: 20094888
Following gene: 20094890
Centisome position: 87.42
GC content: 59.55
Gene sequence:
>576_bases GTGACGGTCGTGCTGAGGCTACCTAGGGAGCTGCGCCCCGAGCTACGTCGACCCTGGGGCACGCTATACCCACGACCGTC CATTAAGACCTACCGACGTCTCCATGAGGAGTCAGAAGTGCTGATTACAGTCGGCGACATGACCACCCGAAGCTTCCTCC GGTGCAGTATCCGGCCGGACGTCGCCGTCGTAGACCGGAAGATGCTCAGAACTGTCCCCGTGGATCCAGGGAACAAGTTC CCGGTAACCCTCGACGTGAACAACCCACCGGGTACTATCACCCGGGAGGCTTGGGATACTGTACGGCGGGGTATCGACTA CGCACTCGATGGCGACGCGACCCTCATCGACGTTACCGGAGAGGAAGACCTACTAGCCATTCCCGCTATCCTGATCGCTC CCGAAAACTCGATAGTCTGCTACGGGTTGCCGGGCGAGGGAATGGTGGCGGCGCGGGTAACCCAACACCTCAAGGATTCT GTCCTCCGACTGCTAACGAGGTTTCGGGGGTACGACGAATGGAAGTCGAGATCTTGGATCAGCGGGATAACCCCTTGCTG TACCGCAAAGAGGTGA
Upstream 100 bases:
>100_bases AGAACTGGCGCGGTATCGCAGTGATCCTCGACACTGAGTCCCAGACCGCGGACAGGTTGAACGCGAAGATCCCAGGTAAA TACGCCCTGAGAGTTGAGGA
Downstream 100 bases:
>100_bases AGTTCGTCGTACGCCACGAAGACAGTGGTACGCCCCAGAAGTCGGAGGTCCTTCGGAAGCTCGCGGCGATTCTCGACGTT GACAAGGAGGTAGTCCTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MTVVLRLPRELRPELRRPWGTLYPRPSIKTYRRLHEESEVLITVGDMTTRSFLRCSIRPDVAVVDRKMLRTVPVDPGNKF PVTLDVNNPPGTITREAWDTVRRGIDYALDGDATLIDVTGEEDLLAIPAILIAPENSIVCYGLPGEGMVAARVTQHLKDS VLRLLTRFRGYDEWKSRSWISGITPCCTAKR
Sequences:
>Translated_191_residues MTVVLRLPRELRPELRRPWGTLYPRPSIKTYRRLHEESEVLITVGDMTTRSFLRCSIRPDVAVVDRKMLRTVPVDPGNKF PVTLDVNNPPGTITREAWDTVRRGIDYALDGDATLIDVTGEEDLLAIPAILIAPENSIVCYGLPGEGMVAARVTQHLKDS VLRLLTRFRGYDEWKSRSWISGITPCCTAKR >Mature_190_residues TVVLRLPRELRPELRRPWGTLYPRPSIKTYRRLHEESEVLITVGDMTTRSFLRCSIRPDVAVVDRKMLRTVPVDPGNKFP VTLDVNNPPGTITREAWDTVRRGIDYALDGDATLIDVTGEEDLLAIPAILIAPENSIVCYGLPGEGMVAARVTQHLKDSV LRLLTRFRGYDEWKSRSWISGITPCCTAKR
Specific function: Unknown
COG id: COG1909
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0218 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1453_METKA (Q8TVD9)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614736.1 - GeneID: 1478048 - GenomeReviews: AE009439_GR - KEGG: mka:MK1453 - NMPDR: fig|190192.1.peg.1449 - HOGENOM: HBG724144 - OMA: KPFGKVY - BioCyc: MKAN190192:MK1453-MONOMER - HAMAP: MF_00590 - InterPro: IPR007164 - PIRSF: PIRSF006533
Pfam domain/function: PF04019 DUF359
EC number: NA
Molecular weight: Translated: 21599; Mature: 21468
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVLRLPRELRPELRRPWGTLYPRPSIKTYRRLHEESEVLITVGDMTTRSFLRCSIRPD CEEEEECCHHHCHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHEEECCCCC VAVVDRKMLRTVPVDPGNKFPVTLDVNNPPGTITREAWDTVRRGIDYALDGDATLIDVTG HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECC EEDLLAIPAILIAPENSIVCYGLPGEGMVAARVTQHLKDSVLRLLTRFRGYDEWKSRSWI CCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH SGITPCCTAKR CCCCCCCCCCC >Mature Secondary Structure TVVLRLPRELRPELRRPWGTLYPRPSIKTYRRLHEESEVLITVGDMTTRSFLRCSIRPD EEEEECCHHHCHHHCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCHHEEECCCCC VAVVDRKMLRTVPVDPGNKFPVTLDVNNPPGTITREAWDTVRRGIDYALDGDATLIDVTG HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEECCCCEEEEECC EEDLLAIPAILIAPENSIVCYGLPGEGMVAARVTQHLKDSVLRLLTRFRGYDEWKSRSWI CCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHH SGITPCCTAKR CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014