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The map label for this gene is 20094808

Identifier: 20094808

GI number: 20094808

Start: 1400084

End: 1400647

Strand: Direct

Name: 20094808

Synonym: MK1372

Alternate gene names: NA

Gene position: 1400084-1400647 (Clockwise)

Preceding gene: 20094804

Following gene: 20094809

Centisome position: 82.6

GC content: 56.38

Gene sequence:

>564_bases
ATGATTTCGGAAGATAGCGGTAGTAATGAGGATCGGGAGGTTAAGATAGCCGTGATCGGGCCGGAGGACGCCGGCAAGAC
CACTGTGGTCCGGCAGCTATCCGACAAGTTCACCACGGTATCGCCCCGTGGGAAGACCGTGGGGATCGACTTCGGGAAGT
GCAAGTACTACGAGGGGGTATACATGTTTGGCGTTCCGGGACACCTGCGATTCAAGTTCGTGATGCGTCTGGGGGCACGG
AACGCCGACGGTATGATCCTGGTCATCGACTCGGCCGATCCACGCATAGACAAGGCGGTTAAGATATACAATATCGTGAA
AAGTGTTGTGAAGAACCCGCATCGCGTCGTGGTCTTCGCCAACAAGCAGGACCTCCCCGACGCCCTGTCGCCGGAGCAGG
TCGGGGAACTCGTCAAGAGGGCACTGGGTATCTCCCCACCCGTGATCGGGACCGTTGCGATTAAAGGGGAGGGGTTACGG
GAAGGCCTTGACACCTTGCTCTTCCAGCCCACCTACAACGGAACTAATGAAATTGATGATATCGAGATTAAAGGGATCCG
CTGA

Upstream 100 bases:

>100_bases
CCCGGTCTTCACACGCCACGTACCGGTTTTCATCCGGATCCCCCAATTAACCTGTTGTGAAGGTTTATATAGTACGATCA
CGGGCGCCGGAGGGGGTTGG

Downstream 100 bases:

>100_bases
GCCCCTACAGGGGTCCCGACGTTGCCCGTCCCCGTCAAGAACAGGGCCACCCTCGCCCAATTGATGTTATCCTATGGGAT
CACGATATGCGTAGACGAGG

Product: small, Ras-like GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MISEDSGSNEDREVKIAVIGPEDAGKTTVVRQLSDKFTTVSPRGKTVGIDFGKCKYYEGVYMFGVPGHLRFKFVMRLGAR
NADGMILVIDSADPRIDKAVKIYNIVKSVVKNPHRVVVFANKQDLPDALSPEQVGELVKRALGISPPVIGTVAIKGEGLR
EGLDTLLFQPTYNGTNEIDDIEIKGIR

Sequences:

>Translated_187_residues
MISEDSGSNEDREVKIAVIGPEDAGKTTVVRQLSDKFTTVSPRGKTVGIDFGKCKYYEGVYMFGVPGHLRFKFVMRLGAR
NADGMILVIDSADPRIDKAVKIYNIVKSVVKNPHRVVVFANKQDLPDALSPEQVGELVKRALGISPPVIGTVAIKGEGLR
EGLDTLLFQPTYNGTNEIDDIEIKGIR
>Mature_187_residues
MISEDSGSNEDREVKIAVIGPEDAGKTTVVRQLSDKFTTVSPRGKTVGIDFGKCKYYEGVYMFGVPGHLRFKFVMRLGAR
NADGMILVIDSADPRIDKAVKIYNIVKSVVKNPHRVVVFANKQDLPDALSPEQVGELVKRALGISPPVIGTVAIKGEGLR
EGLDTLLFQPTYNGTNEIDDIEIKGIR

Specific function: Unknown

COG id: COG2229

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1339 [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6320009, Length=162, Percent_Identity=34.5679012345679, Blast_Score=73, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6320064, Length=162, Percent_Identity=35.1851851851852, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6324668, Length=163, Percent_Identity=34.3558282208589, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6319641, Length=177, Percent_Identity=31.0734463276836, Blast_Score=65, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355879, Length=165, Percent_Identity=30.9090909090909, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24653835, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653827, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653831, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653829, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653833, Length=164, Percent_Identity=30.4878048780488, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016433
- InterPro:   IPR013684
- InterPro:   IPR001806
- InterPro:   IPR005225 [H]

Pfam domain/function: PF08477 Miro [H]

EC number: NA

Molecular weight: Translated: 20460; Mature: 20460

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISEDSGSNEDREVKIAVIGPEDAGKTTVVRQLSDKFTTVSPRGKTVGIDFGKCKYYEGV
CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCEEECCCCCEEEECCE
YMFGVPGHLRFKFVMRLGARNADGMILVIDSADPRIDKAVKIYNIVKSVVKNPHRVVVFA
EEECCCCHHHHHEEEHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
NKQDLPDALSPEQVGELVKRALGISPPVIGTVAIKGEGLREGLDTLLFQPTYNGTNEIDD
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCCCCC
IEIKGIR
EEEEECC
>Mature Secondary Structure
MISEDSGSNEDREVKIAVIGPEDAGKTTVVRQLSDKFTTVSPRGKTVGIDFGKCKYYEGV
CCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCEEECCCCCEEEECCE
YMFGVPGHLRFKFVMRLGARNADGMILVIDSADPRIDKAVKIYNIVKSVVKNPHRVVVFA
EEECCCCHHHHHEEEHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE
NKQDLPDALSPEQVGELVKRALGISPPVIGTVAIKGEGLREGLDTLLFQPTYNGTNEIDD
CCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHEEECCCCCCCCCCCC
IEIKGIR
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]