Click here to switch to the map view.

The map label for this gene is 20094756

Identifier: 20094756

GI number: 20094756

Start: 1339214

End: 1339987

Strand: Direct

Name: 20094756

Synonym: MK1320

Alternate gene names: NA

Gene position: 1339214-1339987 (Clockwise)

Preceding gene: 20094755

Following gene: 20094757

Centisome position: 79.01

GC content: 66.67

Gene sequence:

>774_bases
ATGAGTCGCCCGCGCCCGGGATCCCGCGGCTGGATGCTGATGTCCGAGGGCGTCTTCGCGCTGATCGTGATCTTGTTGAC
CTTCACGGCGACGGTAGGTTCGATCCACTTCAAACACACCCATCCCAGGAAGCAAAACAGGCTCACCCGCCTGTCGCACG
CCAGGTGCATCGTGGTCGTGACGGAGGACCTATGCGGCGGGTCCAGGTACTCGGTCCGGCTCGCCGAGATGCTCAGGAGG
AGAGGTGTACCGATGACGTTCGCCGTCCCGGCCTGGGAGGCCTACGCCTACCCCGACCGGATGAGGAAGCTGCGCGAGCT
GGGAGGGGACCTCATCAACCACGCCAACGACGGCGGAGCGTCGTACGCGTTCCTGGGTCGCCCGGGCAAGGTGGCGGGGT
TACCGGTGAAGACGCAGCGCCAGATCATCCACACGACCCAGAAGTGGATCCACAGGGCCACCGGCGTACGACCGGACGCG
TTCAGGGCGCCCGGCCTGGCGATCGACGAGAACACGTACCGGGCCCTGGTGGAGGAGGGCATCTGGGTGGATTCGAGTAA
GATCTACACCAGGCCCGGCACCCGGGGGGGCGCCCAGGTGGATCGCGATCGACGGCCACCGGATCCTCGAGGTACCCATA
GCGTGCTACGCGGAGTGGCGGTACGAGCGCGGGCAGCCGGTGGAGCCGGAGTTCCTGTGCTCGTTCGCCGACGACCTGTT
CGTGCGTCCCAAGATAGCGACCGGTCACCCCCGAGGAGGCGCTGGAGAACCTGA

Upstream 100 bases:

>100_bases
GACGCGGGCCGCCGTGATCACACCCGACCCGGGGTAACTTATTTTCCGTCACGTTGTGTGCCCGATGACGACCATCGTCG
GGCGGCGGGGAAACCGGCCC

Downstream 100 bases:

>100_bases
AGCGCGGGTTCGACCAGTACTACCGGCACGGCCGGCCCGGCAGGCCCACGGTGTTCGTCGTGCTCTTCCACGAGCACATC
ACGGCCAACCCGAAGTACTG

Product: xylanase/chitin deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MSRPRPGSRGWMLMSEGVFALIVILLTFTATVGSIHFKHTHPRKQNRLTRLSHARCIVVVTEDLCGGSRYSVRLAEMLRR
RGVPMTFAVPAWEAYAYPDRMRKLRELGGDLINHANDGGASYAFLGRPGKVAGLPVKTQRQIIHTTQKWIHRATGVRPDA
FRAPGLAIDENTYRALVEEGIWVDSSKIYTRPGTRGGAQVDRDRRPPDPRGTHSVLRGVAVRARAAGGAGVPVLVRRRPV
RASQDSDRSPPRRRWRT

Sequences:

>Translated_257_residues
MSRPRPGSRGWMLMSEGVFALIVILLTFTATVGSIHFKHTHPRKQNRLTRLSHARCIVVVTEDLCGGSRYSVRLAEMLRR
RGVPMTFAVPAWEAYAYPDRMRKLRELGGDLINHANDGGASYAFLGRPGKVAGLPVKTQRQIIHTTQKWIHRATGVRPDA
FRAPGLAIDENTYRALVEEGIWVDSSKIYTRPGTRGGAQVDRDRRPPDPRGTHSVLRGVAVRARAAGGAGVPVLVRRRPV
RASQDSDRSPPRRRWRT
>Mature_256_residues
SRPRPGSRGWMLMSEGVFALIVILLTFTATVGSIHFKHTHPRKQNRLTRLSHARCIVVVTEDLCGGSRYSVRLAEMLRRR
GVPMTFAVPAWEAYAYPDRMRKLRELGGDLINHANDGGASYAFLGRPGKVAGLPVKTQRQIIHTTQKWIHRATGVRPDAF
RAPGLAIDENTYRALVEEGIWVDSSKIYTRPGTRGGAQVDRDRRPPDPRGTHSVLRGVAVRARAAGGAGVPVLVRRRPVR
ASQDSDRSPPRRRWRT

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28710; Mature: 28578

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPRPGSRGWMLMSEGVFALIVILLTFTATVGSIHFKHTHPRKQNRLTRLSHARCIVVV
CCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEEEEE
TEDLCGGSRYSVRLAEMLRRRGVPMTFAVPAWEAYAYPDRMRKLRELGGDLINHANDGGA
ECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCC
SYAFLGRPGKVAGLPVKTQRQIIHTTQKWIHRATGVRPDAFRAPGLAIDENTYRALVEEG
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHCC
IWVDSSKIYTRPGTRGGAQVDRDRRPPDPRGTHSVLRGVAVRARAAGGAGVPVLVRRRPV
CEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
RASQDSDRSPPRRRWRT
CCCCCCCCCCCHHHCCC
>Mature Secondary Structure 
SRPRPGSRGWMLMSEGVFALIVILLTFTATVGSIHFKHTHPRKQNRLTRLSHARCIVVV
CCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCEEEEEE
TEDLCGGSRYSVRLAEMLRRRGVPMTFAVPAWEAYAYPDRMRKLRELGGDLINHANDGGA
ECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCC
SYAFLGRPGKVAGLPVKTQRQIIHTTQKWIHRATGVRPDAFRAPGLAIDENTYRALVEEG
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCHHHHHHHHCC
IWVDSSKIYTRPGTRGGAQVDRDRRPPDPRGTHSVLRGVAVRARAAGGAGVPVLVRRRPV
CEECCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCC
RASQDSDRSPPRRRWRT
CCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA