| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094734
Identifier: 20094734
GI number: 20094734
Start: 1303469
End: 1304803
Strand: Direct
Name: 20094734
Synonym: MK1298
Alternate gene names: NA
Gene position: 1303469-1304803 (Clockwise)
Preceding gene: 20094733
Following gene: 20094735
Centisome position: 76.9
GC content: 72.43
Gene sequence:
>1335_bases TTGACCGCGCGCCACGTGGCGGTCGGGTTCCTGGTCCTGCCTCAGGACCGCGCGTTCTTCCGCAGGCCCGAGCCATTCAG GGCCGCGGCCGAGTCGGTGGCGGAGTCGGAGGGTCCCAAGCCCTGGACCGTGGCCGGCTGCGTCCGCAACGCGCTCCTGG AGGTCACCGACGGGGACCTCGGGGAGGTCCTGGAGTACCCGCGGAAGCTCGTCAGGTCGGCCCCGCCCGGGTCGATCGGG GAGGCCCTGGGGGAGACGGCCCTCTTCCTCGGGACCTGGGTCGTCGAGGTGCGGCCCGGGGCGCCCGACCGGCTCGAGCG CGTCTGGTGGCCGTGCCCCGCCCACCTGGCGAGGTACGAGCCCGAAAGTGGGGGCGAGGCCGTCGACCTGCTGAGGGTCG AGGAGGTCGGGGACGCGGCGATCGCGTTCTCGGGTCACGACGAAGCACTCCGCCGCCGGTACGGGTTCATGACGCCGAAA CCCCCGAGGCCCGGCTCGGACGTCGAGACCCCCGGGCGCTACGTCGACACGGGAACGATCTCGAAGATCCTCGCGGGAAG GACGCCCGCGAGAAGGACGCCGGACCTCGAGGACAACGTCGCGGGACCCGGGGAACTCCTGCGTCCCGAGCTCCACGTCG GCGTCAAGCTGGTCGGGCTCAAGACCGCGGACGAGGGCTACCTGTACGCCGCGAGGTTCCTCAGACCGGGCAGGTCCCCG GTGGACGGGGGTAGTCTCGTCGGGTTCCTCACGGTCCTGGCGGTGCCCGAGGACGCGTGGGACGACGGGGTACTGGAGGA CCTCCCCTCCCCGGGCGGCCGACTCGGCCGGGGACGGCACGCGTGGGTGATCCCGCTCCGCGCGGGGGACTGGTCGGACG ACGTCTTCCCCGAGGTGGAGGAACCGGAGGGGGACCTCCCGGGCCTGTACCTCGAGACCCCGACCCCGTTCCCGGAGGGT GACGTCCGGTCCTCCTCCCCGGGCGACCGCCTGAAGGCAGAGGCCGTCCTCGTGAGACCCGGGAGCCCAAGAGATCGCGT CCTCCAGGTCGAGCTCGAGGTCTCGGAGGTGGAGTCCGAGGTACTGGCCGACCGGGTGATCGAGACCCGCCGCGTCTCGA CGTGGTCCGGTAAGCGCGCCTCCCCTGACCACCTGGCCGCCGCCGAGGGAACCGTGCTCGCGCTCGGGAAGCTCGACGTC GACCCCGGCACGCCCCTGCTCCTCTTCCCCAGGATGGGGGATGAAGACAGAGAGCTGCTCGCCTCCAGGCTCGCGTTCCA CCTCTCCGGCGTGGGTACGGCCTACGCCCTGAGCCTACCGGGGGTGAGCCCGTGA
Upstream 100 bases:
>100_bases AGGCCGGACCCGAGGACGGCGACCCGGGCGCGGAGGTGGGTCGCGCGCTGGAGATCGCCCTCGAGCTCCGCTCGGAGTGC CCGGCCGGGGGTAACGGGGG
Downstream 100 bases:
>100_bases CGGACGCCCTCCCGTACTTCCTCGTGTGCCGGACGCCGACGAGGGCGGGTGCGGGTCAGCGGGCGACGGACGTGATCGAC CTACCCCTCCAGCGCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTARHVAVGFLVLPQDRAFFRRPEPFRAAAESVAESEGPKPWTVAGCVRNALLEVTDGDLGEVLEYPRKLVRSAPPGSIG EALGETALFLGTWVVEVRPGAPDRLERVWWPCPAHLARYEPESGGEAVDLLRVEEVGDAAIAFSGHDEALRRRYGFMTPK PPRPGSDVETPGRYVDTGTISKILAGRTPARRTPDLEDNVAGPGELLRPELHVGVKLVGLKTADEGYLYAARFLRPGRSP VDGGSLVGFLTVLAVPEDAWDDGVLEDLPSPGGRLGRGRHAWVIPLRAGDWSDDVFPEVEEPEGDLPGLYLETPTPFPEG DVRSSSPGDRLKAEAVLVRPGSPRDRVLQVELEVSEVESEVLADRVIETRRVSTWSGKRASPDHLAAAEGTVLALGKLDV DPGTPLLLFPRMGDEDRELLASRLAFHLSGVGTAYALSLPGVSP
Sequences:
>Translated_444_residues MTARHVAVGFLVLPQDRAFFRRPEPFRAAAESVAESEGPKPWTVAGCVRNALLEVTDGDLGEVLEYPRKLVRSAPPGSIG EALGETALFLGTWVVEVRPGAPDRLERVWWPCPAHLARYEPESGGEAVDLLRVEEVGDAAIAFSGHDEALRRRYGFMTPK PPRPGSDVETPGRYVDTGTISKILAGRTPARRTPDLEDNVAGPGELLRPELHVGVKLVGLKTADEGYLYAARFLRPGRSP VDGGSLVGFLTVLAVPEDAWDDGVLEDLPSPGGRLGRGRHAWVIPLRAGDWSDDVFPEVEEPEGDLPGLYLETPTPFPEG DVRSSSPGDRLKAEAVLVRPGSPRDRVLQVELEVSEVESEVLADRVIETRRVSTWSGKRASPDHLAAAEGTVLALGKLDV DPGTPLLLFPRMGDEDRELLASRLAFHLSGVGTAYALSLPGVSP >Mature_443_residues TARHVAVGFLVLPQDRAFFRRPEPFRAAAESVAESEGPKPWTVAGCVRNALLEVTDGDLGEVLEYPRKLVRSAPPGSIGE ALGETALFLGTWVVEVRPGAPDRLERVWWPCPAHLARYEPESGGEAVDLLRVEEVGDAAIAFSGHDEALRRRYGFMTPKP PRPGSDVETPGRYVDTGTISKILAGRTPARRTPDLEDNVAGPGELLRPELHVGVKLVGLKTADEGYLYAARFLRPGRSPV DGGSLVGFLTVLAVPEDAWDDGVLEDLPSPGGRLGRGRHAWVIPLRAGDWSDDVFPEVEEPEGDLPGLYLETPTPFPEGD VRSSSPGDRLKAEAVLVRPGSPRDRVLQVELEVSEVESEVLADRVIETRRVSTWSGKRASPDHLAAAEGTVLALGKLDVD PGTPLLLFPRMGDEDRELLASRLAFHLSGVGTAYALSLPGVSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47913; Mature: 47781
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARHVAVGFLVLPQDRAFFRRPEPFRAAAESVAESEGPKPWTVAGCVRNALLEVTDGDL CCCCEEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHEECCCCCH GEVLEYPRKLVRSAPPGSIGEALGETALFLGTWVVEVRPGAPDRLERVWWPCPAHLARYE HHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHCCCCCHHHHHCC PESGGEAVDLLRVEEVGDAAIAFSGHDEALRRRYGFMTPKPPRPGSDVETPGRYVDTGTI CCCCCCEEEEEEHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHH SKILAGRTPARRTPDLEDNVAGPGELLRPELHVGVKLVGLKTADEGYLYAARFLRPGRSP HHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHCCEEEEEEEECCCCEEEEHHHHCCCCCC VDGGSLVGFLTVLAVPEDAWDDGVLEDLPSPGGRLGRGRHAWVIPLRAGDWSDDVFPEVE CCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC EPEGDLPGLYLETPTPFPEGDVRSSSPGDRLKAEAVLVRPGSPRDRVLQVELEVSEVESE CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEHHHHHHH VLADRVIETRRVSTWSGKRASPDHLAAAEGTVLALGKLDVDPGTPLLLFPRMGDEDRELL HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCEEEECCCCCHHHHHH ASRLAFHLSGVGTAYALSLPGVSP HHHHHHHHCCCCCEEEEECCCCCC >Mature Secondary Structure TARHVAVGFLVLPQDRAFFRRPEPFRAAAESVAESEGPKPWTVAGCVRNALLEVTDGDL CCCEEEEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHEECCCCCH GEVLEYPRKLVRSAPPGSIGEALGETALFLGTWVVEVRPGAPDRLERVWWPCPAHLARYE HHHHHHHHHHHHCCCCCHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHCCCCCHHHHHCC PESGGEAVDLLRVEEVGDAAIAFSGHDEALRRRYGFMTPKPPRPGSDVETPGRYVDTGTI CCCCCCEEEEEEHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHH SKILAGRTPARRTPDLEDNVAGPGELLRPELHVGVKLVGLKTADEGYLYAARFLRPGRSP HHHHHCCCCCCCCCCCCCCCCCCHHHCCCHHHCCEEEEEEEECCCCEEEEHHHHCCCCCC VDGGSLVGFLTVLAVPEDAWDDGVLEDLPSPGGRLGRGRHAWVIPLRAGDWSDDVFPEVE CCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCC EPEGDLPGLYLETPTPFPEGDVRSSSPGDRLKAEAVLVRPGSPRDRVLQVELEVSEVESE CCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEHHHHHHH VLADRVIETRRVSTWSGKRASPDHLAAAEGTVLALGKLDVDPGTPLLLFPRMGDEDRELL HHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCEEEECCCCCHHHHHH ASRLAFHLSGVGTAYALSLPGVSP HHHHHHHHCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA