| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094733
Identifier: 20094733
GI number: 20094733
Start: 1301091
End: 1303472
Strand: Direct
Name: 20094733
Synonym: MK1297
Alternate gene names: NA
Gene position: 1301091-1303472 (Clockwise)
Preceding gene: 20094730
Following gene: 20094734
Centisome position: 76.76
GC content: 69.77
Gene sequence:
>2382_bases ATGCGGTATCGCCTTCGACGCCTCGCACACCGGCCACCCTCCTCGACGTCGTCCTCACCCACGCCCCTCCTCAGCCGCAC CGAGACCGGGGAGGGTCGGAGGTCCTTCCCCTCCGACGGTCTGCCGCCCCAGAACTCGGCCTCGACGCGGCGGAGCCCGT CCCCGTCCAGGAAGGAGGCCGCGACGGCCCGGAACGCCCACCTGAACTGTCCCCTGAGCTCCGGGGGTCGGGGGAGCGGT CCGTCCCGGTCGTACCTCACCTGCGAGGTGATCGCGGGCGTGGCGAAGGTGCACCCGACGGTCAGGGTCCTCAACCGCGG CCCCGGTCCGCCGCCGGGGATAGCTTTGATAAAGTTAATTCAGGGAGAGTGGCGAGGCGCCGGGGTGAGCCGGGTGCCGA AGCTGGTCACCGTGCGCCTACGGCCGTCCGGCGGCATCAAGACCTGGCTCCGGGGTCGTAAACTGGCGGACTCCCTCGCG GCGAGTTGGTTGCTAGGCTACCTGGTTTACCGCGTGTACGAGCGGCTGTGCCGTAGGCTGGACGTCGAGAGGGTCCTCCG ACCCGTCCTACCGGGGAATCACCCCTTCGAGAAGAAGCCGGATAACCTGGAGCCGTGGGAGACGCGCGGGTGCGTGATGC CGGACGCCGTCGAGCTGGTCGTGGACGGCGACGTGAGCGCGGAGGAGGTCGCCCGCATCGCCCGGGAGACCGTGGAGGAC GTGCTGGAGGACGTCTTGAAGCGCGGCCGCGAGACCCCCTGGAGGTGTCATAACGTCAGCCTGTACGAGCCGCTCGAGGA CTGGTGGGAGCGCACGTCCGGGAGGTCCGCGGCGAGGGTCGAGCTCCCGCCCGGCCTGATCCAGGTCTCCGCGGCCGTCG TGGACCTGGAGGAGCCAGACGACGAAGAAGCGTACCGGGAGGCCGTCCGCCGCGTCGCGAGCCTCGTCGGGACGCGGGCC GAGGTGATGGACGCGAGGGGATCCGGGGGTCAGCCCTGCAGCGTCTGCGGTACGTACCCGACCGTGGGAGATCGTGAGTT CTGGGAGGAGCTCTCGGAGCGGCTCCCTCCCCAGCTCCTGAAGCGGTGGGAGGGCGGCTTCGAGCGCCTCTGCGCCGCGT GCCTGCTCAAGCGCTACTTCGGGACGCACGTGATACGCTCCTGGTACCTGGAGAAGATCTCCTGGATCCCGTCCACGGCC GAGGTCGCGATCACCCCGGTCAAGGTCGGGATACTGAACAGGTGGGAGGAGCTCAAGGACGACGGGGGCTTCCGAGAGGC TGCCCTCGGGTTTCTGAGGGAAGTGCTACCGGAGCAGCTGCGGCAGATCGCCCACTACCTCAGGTGCGTCAAGGAGGTGG ATCGGGCGGGGGAGCTCGAGGAGGCCGCCAAGGACCTGAAGAGGGACCGCCTGGAGCCCGAAGGGCTACCGGAGGACGTG AGGAAGGAACTCCACCGGCTGACCCCCAAGGCGCCCAGACTGGACGAGGAGCTGGGGGACGTCGAGGATTCCCTGATCGA GGTCCTCCTCTGCGTCGAGGGCAGGTTCTGGTACGATCCCGAGGCCCCGGGGGGACTGAGGGAGCTGCTCGAGGCCGGCG ACCTGGAGAACCTCTACACCCCGTACTACGCCCTCCTGAAGCTGGACGGCGACCGCATGGGCGAGCTCTTCTCGCGGGAC CCGGAGACGACCCGCGGGGCCTCCCGGGCCACGATCGAGTTCGGCCTGAAGGCGATGAGAATCGTGCACGGGCACTACGG GGTCCTCCTGTACTGCGGGGGCGACGACGTCTTCGCGGCGCTCCCCCTGCACACGGCCCTCGACTGCGCGTTCGAGCTCG AGGAAACCTTCCGGGAGAGCCTGAAGAAGTGGAAGGGGACCTGCAGCGCCGGGCTGGCCGTCGTCCACCACCTCCACCCG CTCCGGGACGCGATCGACCTGGCGTACCGGCTCGAGAAGAGGGCTAAGGAGGCCGGCAGGAACCGGCTCGCGGTAGGACT GTACCGGAGGAACGCCCCGGAGCGGGTCGCGGTCCTGAAGTGGGAGGCCGACGGGAAACGCCCCTGGGGGCTACTGTTCG AGCTCGCGGACCTCGTCTCCAGGAGGGCCGCGTACCACCTGCCGCGGGACTGGTGGGAGGGCTGGTGGGAGGAGCTCGAC GAGCCGAAGAACCTGCTCCGCTCGCTGCTCGGGTACGTGGCGCTGAGGCACCGAGGTGAGGGCGCCGACGAGGGTGAGAT CGTCGGGCTCGTGGAGAGGATCGCCGAGGTCGTCGGGAAGGCCGGACCCGAGGACGGCGACCCGGGCGCGGAGGTGGGTC GCGCGCTGGAGATCGCCCTCGAGCTCCGCTCGGAGTGCCCGGCCGGGGGTAACGGGGGTTGA
Upstream 100 bases:
>100_bases GATCACGAGAGGTTGCTCTTCACGTCGACCGCGCAGGTAGATGGGCGGGCATAGATAGCACCGGTTGTCGACCCGAAGTC GACCGTCTTCGTCGATCGTG
Downstream 100 bases:
>100_bases CCGCGCGCCACGTGGCGGTCGGGTTCCTGGTCCTGCCTCAGGACCGCGCGTTCTTCCGCAGGCCCGAGCCATTCAGGGCC GCGGCCGAGTCGGTGGCGGA
Product: DNA-dependent DNA polymerase
Products: NA
Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; CRISPR-Associated Cmr2 Family Protein; Crm2 Family CRISPR-Associated Protein; Hydrolase; Cmr2 Family CRISPR-Associated Protein; DNA-Dependent DNA Polymerase; CRISPR-Associated Protein
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MRYRLRRLAHRPPSSTSSSPTPLLSRTETGEGRRSFPSDGLPPQNSASTRRSPSPSRKEAATARNAHLNCPLSSGGRGSG PSRSYLTCEVIAGVAKVHPTVRVLNRGPGPPPGIALIKLIQGEWRGAGVSRVPKLVTVRLRPSGGIKTWLRGRKLADSLA ASWLLGYLVYRVYERLCRRLDVERVLRPVLPGNHPFEKKPDNLEPWETRGCVMPDAVELVVDGDVSAEEVARIARETVED VLEDVLKRGRETPWRCHNVSLYEPLEDWWERTSGRSAARVELPPGLIQVSAAVVDLEEPDDEEAYREAVRRVASLVGTRA EVMDARGSGGQPCSVCGTYPTVGDREFWEELSERLPPQLLKRWEGGFERLCAACLLKRYFGTHVIRSWYLEKISWIPSTA EVAITPVKVGILNRWEELKDDGGFREAALGFLREVLPEQLRQIAHYLRCVKEVDRAGELEEAAKDLKRDRLEPEGLPEDV RKELHRLTPKAPRLDEELGDVEDSLIEVLLCVEGRFWYDPEAPGGLRELLEAGDLENLYTPYYALLKLDGDRMGELFSRD PETTRGASRATIEFGLKAMRIVHGHYGVLLYCGGDDVFAALPLHTALDCAFELEETFRESLKKWKGTCSAGLAVVHHLHP LRDAIDLAYRLEKRAKEAGRNRLAVGLYRRNAPERVAVLKWEADGKRPWGLLFELADLVSRRAAYHLPRDWWEGWWEELD EPKNLLRSLLGYVALRHRGEGADEGEIVGLVERIAEVVGKAGPEDGDPGAEVGRALEIALELRSECPAGGNGG
Sequences:
>Translated_793_residues MRYRLRRLAHRPPSSTSSSPTPLLSRTETGEGRRSFPSDGLPPQNSASTRRSPSPSRKEAATARNAHLNCPLSSGGRGSG PSRSYLTCEVIAGVAKVHPTVRVLNRGPGPPPGIALIKLIQGEWRGAGVSRVPKLVTVRLRPSGGIKTWLRGRKLADSLA ASWLLGYLVYRVYERLCRRLDVERVLRPVLPGNHPFEKKPDNLEPWETRGCVMPDAVELVVDGDVSAEEVARIARETVED VLEDVLKRGRETPWRCHNVSLYEPLEDWWERTSGRSAARVELPPGLIQVSAAVVDLEEPDDEEAYREAVRRVASLVGTRA EVMDARGSGGQPCSVCGTYPTVGDREFWEELSERLPPQLLKRWEGGFERLCAACLLKRYFGTHVIRSWYLEKISWIPSTA EVAITPVKVGILNRWEELKDDGGFREAALGFLREVLPEQLRQIAHYLRCVKEVDRAGELEEAAKDLKRDRLEPEGLPEDV RKELHRLTPKAPRLDEELGDVEDSLIEVLLCVEGRFWYDPEAPGGLRELLEAGDLENLYTPYYALLKLDGDRMGELFSRD PETTRGASRATIEFGLKAMRIVHGHYGVLLYCGGDDVFAALPLHTALDCAFELEETFRESLKKWKGTCSAGLAVVHHLHP LRDAIDLAYRLEKRAKEAGRNRLAVGLYRRNAPERVAVLKWEADGKRPWGLLFELADLVSRRAAYHLPRDWWEGWWEELD EPKNLLRSLLGYVALRHRGEGADEGEIVGLVERIAEVVGKAGPEDGDPGAEVGRALEIALELRSECPAGGNGG >Mature_793_residues MRYRLRRLAHRPPSSTSSSPTPLLSRTETGEGRRSFPSDGLPPQNSASTRRSPSPSRKEAATARNAHLNCPLSSGGRGSG PSRSYLTCEVIAGVAKVHPTVRVLNRGPGPPPGIALIKLIQGEWRGAGVSRVPKLVTVRLRPSGGIKTWLRGRKLADSLA ASWLLGYLVYRVYERLCRRLDVERVLRPVLPGNHPFEKKPDNLEPWETRGCVMPDAVELVVDGDVSAEEVARIARETVED VLEDVLKRGRETPWRCHNVSLYEPLEDWWERTSGRSAARVELPPGLIQVSAAVVDLEEPDDEEAYREAVRRVASLVGTRA EVMDARGSGGQPCSVCGTYPTVGDREFWEELSERLPPQLLKRWEGGFERLCAACLLKRYFGTHVIRSWYLEKISWIPSTA EVAITPVKVGILNRWEELKDDGGFREAALGFLREVLPEQLRQIAHYLRCVKEVDRAGELEEAAKDLKRDRLEPEGLPEDV RKELHRLTPKAPRLDEELGDVEDSLIEVLLCVEGRFWYDPEAPGGLRELLEAGDLENLYTPYYALLKLDGDRMGELFSRD PETTRGASRATIEFGLKAMRIVHGHYGVLLYCGGDDVFAALPLHTALDCAFELEETFRESLKKWKGTCSAGLAVVHHLHP LRDAIDLAYRLEKRAKEAGRNRLAVGLYRRNAPERVAVLKWEADGKRPWGLLFELADLVSRRAAYHLPRDWWEGWWEELD EPKNLLRSLLGYVALRHRGEGADEGEIVGLVERIAEVVGKAGPEDGDPGAEVGRALEIALELRSECPAGGNGG
Specific function: Unknown
COG id: COG1353
COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88612; Mature: 88612
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRLRRLAHRPPSSTSSSPTPLLSRTETGEGRRSFPSDGLPPQNSASTRRSPSPSRKEA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ATARNAHLNCPLSSGGRGSGPSRSYLTCEVIAGVAKVHPTVRVLNRGPGPPPGIALIKLI HHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHH QGEWRGAGVSRVPKLVTVRLRPSGGIKTWLRGRKLADSLAASWLLGYLVYRVYERLCRRL HCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DVERVLRPVLPGNHPFEKKPDNLEPWETRGCVMPDAVELVVDGDVSAEEVARIARETVED CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH VLEDVLKRGRETPWRCHNVSLYEPLEDWWERTSGRSAARVELPPGLIQVSAAVVDLEEPD HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCC DEEAYREAVRRVASLVGTRAEVMDARGSGGQPCSVCGTYPTVGDREFWEELSERLPPQLL HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHH KRWEGGFERLCAACLLKRYFGTHVIRSWYLEKISWIPSTAEVAITPVKVGILNRWEELKD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHC DGGFREAALGFLREVLPEQLRQIAHYLRCVKEVDRAGELEEAAKDLKRDRLEPEGLPEDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH RKELHRLTPKAPRLDEELGDVEDSLIEVLLCVEGRFWYDPEAPGGLRELLEAGDLENLYT HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHH PYYALLKLDGDRMGELFSRDPETTRGASRATIEFGLKAMRIVHGHYGVLLYCGGDDVFAA HHHHHHEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEH LPLHTALDCAFELEETFRESLKKWKGTCSAGLAVVHHLHPLRDAIDLAYRLEKRAKEAGR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRLAVGLYRRNAPERVAVLKWEADGKRPWGLLFELADLVSRRAAYHLPRDWWEGWWEELD CCEEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC EPKNLLRSLLGYVALRHRGEGADEGEIVGLVERIAEVVGKAGPEDGDPGAEVGRALEIAL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ELRSECPAGGNGG HHHHCCCCCCCCC >Mature Secondary Structure MRYRLRRLAHRPPSSTSSSPTPLLSRTETGEGRRSFPSDGLPPQNSASTRRSPSPSRKEA CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH ATARNAHLNCPLSSGGRGSGPSRSYLTCEVIAGVAKVHPTVRVLNRGPGPPPGIALIKLI HHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHH QGEWRGAGVSRVPKLVTVRLRPSGGIKTWLRGRKLADSLAASWLLGYLVYRVYERLCRRL HCCCCCCCHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DVERVLRPVLPGNHPFEKKPDNLEPWETRGCVMPDAVELVVDGDVSAEEVARIARETVED CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHH VLEDVLKRGRETPWRCHNVSLYEPLEDWWERTSGRSAARVELPPGLIQVSAAVVDLEEPD HHHHHHHCCCCCCCEECCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHEEECCCCC DEEAYREAVRRVASLVGTRAEVMDARGSGGQPCSVCGTYPTVGDREFWEELSERLPPQLL HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHH KRWEGGFERLCAACLLKRYFGTHVIRSWYLEKISWIPSTAEVAITPVKVGILNRWEELKD HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHC DGGFREAALGFLREVLPEQLRQIAHYLRCVKEVDRAGELEEAAKDLKRDRLEPEGLPEDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHH RKELHRLTPKAPRLDEELGDVEDSLIEVLLCVEGRFWYDPEAPGGLRELLEAGDLENLYT HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHH PYYALLKLDGDRMGELFSRDPETTRGASRATIEFGLKAMRIVHGHYGVLLYCGGDDVFAA HHHHHHEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEH LPLHTALDCAFELEETFRESLKKWKGTCSAGLAVVHHLHPLRDAIDLAYRLEKRAKEAGR HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRLAVGLYRRNAPERVAVLKWEADGKRPWGLLFELADLVSRRAAYHLPRDWWEGWWEELD CCEEEEHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC EPKNLLRSLLGYVALRHRGEGADEGEIVGLVERIAEVVGKAGPEDGDPGAEVGRALEIAL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH ELRSECPAGGNGG HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA