| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094728
Identifier: 20094728
GI number: 20094728
Start: 1292092
End: 1292835
Strand: Reverse
Name: 20094728
Synonym: MK1292
Alternate gene names: NA
Gene position: 1292835-1292092 (Counterclockwise)
Preceding gene: 20094731
Following gene: 20094727
Centisome position: 76.27
GC content: 68.68
Gene sequence:
>744_bases ATGCGACGCACGGGGCCGGGGGCGGGTGCCGTGGGTTCGGTCCCGAGCTGGGAGTGGGTGAGGCGGCTCGGGGAGGCCGC CCGGCGGGTGCTGGGTGAGGACGCCCGTGTGGTACCCTTCGGCAGCGTCGCCAAGGGCCGGGCCGTGCCCGGGAGCGACC TGGACGTGATGGTGGTGAGCGAGCGCGCACCCTCCTCCTTCAGGGAGAGGGCTCGGATCGCGTACGAACTGTGCGAGGAG GCCGGGGTACCGGAGGATCGTGTCGACGTGCTGATCGTGAGACCGAAAGATTTCGAGGTTTGGGGTCGTATGCTCATGAC GTCGGAATCCGACGACACGAGGGCGCTGGTCGAGGAGCTGCTGGAACGCGGTGAGAGGTTCCTGAGGTCGGCCGTCGAGT CCGAGGAGCGGGGCTGGAACGACCTAGCCGCACTCCACGCGCACCAGGCCGTGGAGCTGACAATCAAAGCGGCTCTCATA GCTCTGGGCGAGGCGCCGCCGGGAACGCACTTTCTAGGGAAGTTGCTCGGCAGGCTCCACCGGGTCACGGGGAAGGACGC GTTCGGGGAGCTGTCGCGTCGGTACCGATGGGAGCTGAGGGAGCTCTCCCACGCGTGGTCCGAGGTGCGGTACGGTCACT ACCCGGGCGAGGACGTCGACGTGGGGGAACTCGTCGAGGTCGCCCGGGAGGTCGTCGAGGCCGTCCGCGACTACGTCCTG AGGCTCGTCGACGTCGGGGATTGA
Upstream 100 bases:
>100_bases CGCGCGGCGAGGGGGATACCCCCGGTCCTCCTCGAGGTATCATCCTTCGGAAGGGGAACTCCGCCTTAACACCGTCGGTC CCACCTGGATCCTTCATACG
Downstream 100 bases:
>100_bases CCGGCCGGGGATTCCTCCGGCCCGCGGGTGGAGGGAGTTCCCTGCGGAGCTTGTATGGTAACCGAAGATGCGATCGGGGT CCGAGATGACAAGGCTTATA
Product: fused nucleotidyltransferase/uncharacterized domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MRRTGPGAGAVGSVPSWEWVRRLGEAARRVLGEDARVVPFGSVAKGRAVPGSDLDVMVVSERAPSSFRERARIAYELCEE AGVPEDRVDVLIVRPKDFEVWGRMLMTSESDDTRALVEELLERGERFLRSAVESEERGWNDLAALHAHQAVELTIKAALI ALGEAPPGTHFLGKLLGRLHRVTGKDAFGELSRRYRWELRELSHAWSEVRYGHYPGEDVDVGELVEVAREVVEAVRDYVL RLVDVGD
Sequences:
>Translated_247_residues MRRTGPGAGAVGSVPSWEWVRRLGEAARRVLGEDARVVPFGSVAKGRAVPGSDLDVMVVSERAPSSFRERARIAYELCEE AGVPEDRVDVLIVRPKDFEVWGRMLMTSESDDTRALVEELLERGERFLRSAVESEERGWNDLAALHAHQAVELTIKAALI ALGEAPPGTHFLGKLLGRLHRVTGKDAFGELSRRYRWELRELSHAWSEVRYGHYPGEDVDVGELVEVAREVVEAVRDYVL RLVDVGD >Mature_247_residues MRRTGPGAGAVGSVPSWEWVRRLGEAARRVLGEDARVVPFGSVAKGRAVPGSDLDVMVVSERAPSSFRERARIAYELCEE AGVPEDRVDVLIVRPKDFEVWGRMLMTSESDDTRALVEELLERGERFLRSAVESEERGWNDLAALHAHQAVELTIKAALI ALGEAPPGTHFLGKLLGRLHRVTGKDAFGELSRRYRWELRELSHAWSEVRYGHYPGEDVDVGELVEVAREVVEAVRDYVL RLVDVGD
Specific function: Unknown
COG id: COG1708
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27566; Mature: 27566
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS50910 HEPN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTGPGAGAVGSVPSWEWVRRLGEAARRVLGEDARVVPFGSVAKGRAVPGSDLDVMVVS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEC ERAPSSFRERARIAYELCEEAGVPEDRVDVLIVRPKDFEVWGRMLMTSESDDTRALVEEL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH LERGERFLRSAVESEERGWNDLAALHAHQAVELTIKAALIALGEAPPGTHFLGKLLGRLH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RVTGKDAFGELSRRYRWELRELSHAWSEVRYGHYPGEDVDVGELVEVAREVVEAVRDYVL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLVDVGD HHHCCCC >Mature Secondary Structure MRRTGPGAGAVGSVPSWEWVRRLGEAARRVLGEDARVVPFGSVAKGRAVPGSDLDVMVVS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCEEEEEC ERAPSSFRERARIAYELCEEAGVPEDRVDVLIVRPKDFEVWGRMLMTSESDDTRALVEEL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHH LERGERFLRSAVESEERGWNDLAALHAHQAVELTIKAALIALGEAPPGTHFLGKLLGRLH HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH RVTGKDAFGELSRRYRWELRELSHAWSEVRYGHYPGEDVDVGELVEVAREVVEAVRDYVL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RLVDVGD HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA