| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is rps14P
Identifier: 20094658
GI number: 20094658
Start: 1209205
End: 1209351
Strand: Direct
Name: rps14P
Synonym: MK1222
Alternate gene names: 20094658
Gene position: 1209205-1209351 (Clockwise)
Preceding gene: 20094657
Following gene: 20094659
Centisome position: 71.34
GC content: 57.82
Gene sequence:
>147_bases ATGGCGAGGAGGGAGTTCGGCAAGGGCGCACGCCGGTGCCGGCGCTGCGGTGACACGCACGGAGTCATACAGAAGTACGG TATCATGTTGTGCAGGCAGTGTTTCCGAGAAGTGGCCGAAAAGATGGGGTTCAAGAAGTACAACTGA
Upstream 100 bases:
>100_bases GCCCCGTCCCGCGCCGGCACCGGCTGACCAAGGAGGAGGGCATAGTCTTCATGGAGGAGGAGTTCGACGTGGAGGTCCTG CCCTGAGGGGGTGACCCGGA
Downstream 100 bases:
>100_bases GGGGGGTTAGTGTCGCTTGACCTTGATGGACCCGCTCGCGGACGCGATGGCCACGATCAAGAACAACGAGATGGTAGGTA ACAAGGAGTGCGTGATCGAG
Product: 30S ribosomal protein S14P
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 48; Mature: 47
Protein sequence:
>48_residues MARREFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKYN
Sequences:
>Translated_48_residues MARREFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKYN >Mature_47_residues ARREFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKYN
Specific function: Binds 16S rRNA, required for the assembly of 30S particles
COG id: COG0199
COG function: function code J; Ribosomal protein S14
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RS14Z_METKA (Q8TW16)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614505.1 - ProteinModelPortal: Q8TW16 - SMR: Q8TW16 - GeneID: 1477817 - GenomeReviews: AE009439_GR - KEGG: mka:MK1222 - NMPDR: fig|190192.1.peg.1218 - HOGENOM: HBG589144 - ProtClustDB: PRK05766 - BioCyc: MKAN190192:MK1222-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_01364_A - InterPro: IPR001209 - InterPro: IPR018271
Pfam domain/function: PF00253 Ribosomal_S14
EC number: NA
Molecular weight: Translated: 5687; Mature: 5556
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: PS00527 RIBOSOMAL_S14
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.3 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 14.6 %Cys+Met (Translated Protein) 8.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 12.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARREFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKYN CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ARREFGKGARRCRRCGDTHGVIQKYGIMLCRQCFREVAEKMGFKKYN CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014