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The map label for this gene is 20094623

Identifier: 20094623

GI number: 20094623

Start: 1182514

End: 1183134

Strand: Direct

Name: 20094623

Synonym: MK1187

Alternate gene names: NA

Gene position: 1182514-1183134 (Clockwise)

Preceding gene: 20094622

Following gene: 20094624

Centisome position: 69.77

GC content: 62.16

Gene sequence:

>977_bases
TTGGAATCCTATCGAACTCTGTTGGCTGTACTCTTGATGGGCTTGCTTTTCCCCTCTTCGTGGGTAGTGGGGAAGGTGCG
GGTGGAAAGCACCGGTATGCCCTTCGCCACGTACTACCAGAACGTGAAGATGAGCGAGGTACTGCAGAAGCGGCCGAGAG
TCCTCGTCCTTGACCCGTGGTGTGGCCCTAATGGACGCCCGTGGACGAAGGAAGAGCTCCGGAAGATCAAGGACGCCGGG
GTAAAGCCGATCGCCTACCTCCCCGTGTGCGTGGTTGCGGAGTATCATCCGAACCTGTACCGCGAGGCCAGAAGGCGGAA
TCTGCTGGGCGCCGACGATCCCGAGTGGCCGGGGGACTACGCCGTCAAGTTCTGGGAGCCGGCGTGGAGAGACGTCCTCC
GCTCGGAGCTGGCCAGGCTGAAGGACCTGGGCTTCGAGGGCGTGTTCCTGGACGTCGTGGACGCTCACTCACGTGACTGG
TACGTGCGATGGTACGATCGAGTCAATCCACACGGTGATCTCAGGAGGGACGAGCTGAACGCCGTGAAATGGATCGCCCA
AACGGCTCACGGTCTCGGTCTCCGCGTCGTGGTCAACGCGGGTGCGTGGGCGTTCGAGGGGACGGTATGGCCCGGTTGCA
GTCTAGACTGGGCTTCGCTGTGACCGTCGAGAGCGTGCTCTCGGACGGCTCCAGGAGGCTGTACTCACGGAGCGAACTCG
AGAGTAACCTACGGACACTGTCCCGGTTCCAGGGACCGGTCTACGTGATCGAGTACGGGCTCGATCCCGACGACCCCAGC
GTCCGTAGGGCCGCCGAGAAACTGTTCGATAAGACACGAGCCACGTGCGTGTACATAACTTCCGTCAAGCACGACGGCAT
AGGAGTCGCCCTCGTCCCCCTCCGGAGGTGGCTCTGGGACGTGACGCTCGGGCCGCTGCTCGGGGAACCACCCTCTTGGA
TCGGGGGCGGTCGGTGA

Upstream 100 bases:

>100_bases
TGGGATCCGGGATGAAGAGGTCCCGCAGAGCCGATTCCCCGGATGAGGGGAGGGGCCCGACAGACCGTGGCAGGCTTCGC
GCGACACGGGGGCCCATGCC

Downstream 100 bases:

>100_bases
GCCCCCACACCTCATCCGCCTTCGGTGACCCGGCACGATTCATCATCCCGAGGACGGGGCGTCCCCGCCCCCTCCCCGAC
GGGGCTCCCGGAACCCGGGT

Product: extracellular polysaccharide hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>325_residues
MESYRTLLAVLLMGLLFPSSWVVGKVRVESTGMPFATYYQNVKMSEVLQKRPRVLVLDPWCGPNGRPWTKEELRKIKDAG
VKPIAYLPVCVVAEYHPNLYREARRRNLLGADDPEWPGDYAVKFWEPAWRDVLRSELARLKDLGFEGVFLDVVDAHSRDW
YVRWYDRVNPHGDLRRDELNAVKWIAQTAHGLGLRVVVNAGAWAFEGDGMARLQSRLGFAVTVESVLSDGSRRLYSRSEL
ESNLRTLSRFQGPVYVIEYGLDPDDPSVRRAAEKLFDKTRATCVYITSVKHDGIGVALVPLRRWLWDVTLGPLLGEPPSW
IGGGR

Sequences:

>Translated_207_residues
MESYRTLLAVLLMGLLFPSSWVVGKVRVESTGMPFATYYQNVKMSEVLQKRPRVLVLDPWCGPNGRPWTKEELRKIKDAG
VKPIAYLPVCVVAEYHPNLYREARRRNLLGADDPEWPGDYAVKFWEPAWRDVLRSELARLKDLGFEGVFLDVVDAHSRDW
YVRWYDRVNPHGDLRRDELNAVKWIAQTAHGLGLRVVVNAGAWAFEG
>Mature_207_residues
MESYRTLLAVLLMGLLFPSSWVVGKVRVESTGMPFATYYQNVKMSEVLQKRPRVLVLDPWCGPNGRPWTKEELRKIKDAG
VKPIAYLPVCVVAEYHPNLYREARRRNLLGADDPEWPGDYAVKFWEPAWRDVLRSELARLKDLGFEGVFLDVVDAHSRDW
YVRWYDRVNPHGDLRRDELNAVKWIAQTAHGLGLRVVVNAGAWAFEG

Specific function: Unknown

COG id: COG2342

COG function: function code G; Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016063
- InterPro:   IPR017853
- InterPro:   IPR016062
- InterPro:   IPR004352 [H]

Pfam domain/function: PF03537 DUF297 [H]

EC number: NA

Molecular weight: Translated: 23882; Mature: 23882

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESYRTLLAVLLMGLLFPSSWVVGKVRVESTGMPFATYYQNVKMSEVLQKRPRVLVLDPW
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCEEEECCC
CGPNGRPWTKEELRKIKDAGVKPIAYLPVCVVAEYHPNLYREARRRNLLGADDPEWPGDY
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC
AVKFWEPAWRDVLRSELARLKDLGFEGVFLDVVDAHSRDWYVRWYDRVNPHGDLRRDELN
EEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHH
AVKWIAQTAHGLGLRVVVNAGAWAFEG
HHHHHHHHHCCCCEEEEEECCCEEECC
>Mature Secondary Structure
MESYRTLLAVLLMGLLFPSSWVVGKVRVESTGMPFATYYQNVKMSEVLQKRPRVLVLDPW
CCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHCCCHHHHHHHCCCEEEECCC
CGPNGRPWTKEELRKIKDAGVKPIAYLPVCVVAEYHPNLYREARRRNLLGADDPEWPGDY
CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC
AVKFWEPAWRDVLRSELARLKDLGFEGVFLDVVDAHSRDWYVRWYDRVNPHGDLRRDELN
EEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHH
AVKWIAQTAHGLGLRVVVNAGAWAFEG
HHHHHHHHHCCCCEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]